Variant Visualizer (Variants)

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Sequence Annotation

Assembly RGSC_v3.4

Conservation

Genes ( + )

Genes ( - )

Rnor 5.0

SHR/OlaIpcv (KNAW)

.981	.005	.004	.001	.003	.0	.0	.001	.001	.022	.022	.025	.467	--	.0	.166	.285	.121	.001	.0	.016	.01	.021	.004	.282	.006	.191	.003	.005	.025	.002	.035	.002	.11	.001	.001	.001	.002	.001	.08	.55	.003	.021	.0	.0	.016	.007	.001	.09	.093	.012	.002	.084	.063	.001	.493	.019	.063	.216	.007	.0	.001	.001	.009	.004	.001	.014	.326	.129	.17	.153	.036	.126	.016	.029	.082	--	--	--	.003	.228	.258	.189	.002	.0	.925	.01	.007	.016	.003	.002	.244	.006	.021	.001	.0	.0	.004	.0	.073	.001	.001	.003	.002	.002	.006	.0	.002	.195	.001	.0	.0	.001	.316	.072	.14	.013	.8	.998	.937	.897	--	.035	.022	.013	.013	.0	.0	.528	.823	.002	.414	.001	.003	.002	.16	.003	.0	.0	.001	.0	.005	.002	.869	.999	.005	.037	.001	.001	--	--	--	--	--	--	.038	.011	.001	.003	.0	.001	.01	.004	.0	.001	.955	.001	.001	.003	.0	.016	.001	.0	.149	.312	.301	1.0	.069	.01	.0	.003	.013	.004	.009	.005	.05	.001	.083	.089	.054	.026	.002	.006	.006	.011	.185	.11	.178	.193	.007	.979	.895	.001	.002	.0	.001	.001	.015	.065	.024	.016	.003	.62	.001	--	--	--	--	--	--	--	--	--	--	--	.111	.017	.012	.046	.038	--	--	.009	.367	.077	.01	.075	.0	.6	.018	.002	.007	.07	.029	.012	.044	.002	.3	.065	.017	.006	.026	.893	.067	.008	.01	.0	1.0	.285	.281	.673	.684	.013	.004	.167	.0	.076	.001	.0	.006	.037	.011	.011	.012	.001	.0	.2	.176	.148	.814	.002	.611	.006	.377	.001	.467	.014	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	.804	.736	.758	.041	--	.065	.004	.041	.024	.005	.0	.017	.558	.227	--	.004	.225	.003	.001	.992	.0	.006	.012	.012	.001	.987	.014	.001	.326	.142	.02	.001	.005	.007	.054	.009	.477	.001	.002	.028	.957	.983	.44	.003	.162	.0	.0	.06	.117	.02	.077	.015	--	.001	.016	.016	.0	.011	.005	.027	.008	.001	.034	.005	.869	.0	.001	.0	.06	.027	.0	.001	.676	.047	.575	.022	.006	.0	.0	.033	.004	.002	.978	.002	.0	.027	.031	.08	.335	1.0	.896	.001	.001	.004	.444	.001	.013	.003	.028	.007	.0	.036	.006	.0	.001	.0	.008	.0	.0	.034	.005	.0	.013	--	--	--	.004	.011	.001	.001	.003	.032	.059	.04	.063	.029	.027	.018	.002	.003	.029
Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a										Scn8a
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
A	C	C	9	T	T	A	A	G	C	8	C	T	C	G	5	10	3	T	T	G	G	T	G	T	C	5	C	T	C	8	C	4	A	G	C	A	T	G	T	T	C	5	T	T	T	C	T	C	A	A	C	37	A	A	C	C	C	C	7	G	T	T	A	C	A	A	T	C	T	A	G	G	C	C	G	A	T	C	C	A	A	T	T	G	A	T	T	A	5	G	C	C	T	G	A	C	A	C	A	T	G	T	G	A	C	G	T	A	G	A	C	T	A	C	3	T	T	G	A	G	21	G	C	T	T	C	T	G	T	A	C	G	G	G	T	T	A	A	T	T	C	T	G	A	T	T	22	A	7	T	A	T	2	T	T	T	C	A	T	C	A	T	C	C	G	A	3	C	T	A	A	T	A	T	C	T	C	A	A	27	A	C	T	A	G	C	T	A	A	T	C	A	A	A	16	A	24	20	T	A	A	C	A	C	G	T	C	T	124	C	C	A	C	T	G	C	T	T	T	A	C	C	T	C	A	G	4	A	T	T	C	A	T	T	G	A	C	T	G	G	G	C	120	A	A	C	G	C	T	T	T	T	G	T	T	C	G	3	2	A	T	2	T	T	T	G	C	2	T	6	A	T	G	4	T	C	C	C	A	G	A	A	A	T	G	G	A	A	A	T	T	T	A	C	G	T	C	A	C	C	A	8	C	C	A	T	C	G	T	2	T	2	C	12	T	C	T	G	A	A	T	G	3	2	A	A	T	A	C	A	C	C	C	A	A	A	G	C	A	G	C	T	T	T	A	T	G	A	T	T	A	A	T	C	C	C	A	C	A	A	G	A	C	T	G	A	T	T	A	T	A	T	9	T	15	T	A	T	G	G	A	G	T	G	T	T	C	T	A	A	T	C	G	2	A	C	C	C	G	G	A	A	T	A	T	T	G	2	T	A	T	T	T	T	T	C	A	A	T	A	A	C	T	A	T	G	T	G	A	C	A	C
140,377,226	140,377,505	140,377,562	140,377,564	140,377,813	140,377,858	140,377,893	140,377,904	140,377,967	140,378,480	140,378,482	140,378,680	140,379,020	140,379,411	140,379,782	140,379,850	140,379,861	140,379,995	140,380,289	140,380,554	140,380,697	140,380,750	140,381,995	140,382,283	140,382,741	140,382,844	140,382,868	140,383,449	140,383,452	140,383,473	140,383,480	140,383,607	140,383,866	140,383,938	140,384,018	140,384,080	140,384,084	140,384,088	140,384,126	140,384,424	140,384,466	140,384,491	140,384,543	140,384,708	140,384,710	140,384,825	140,384,828	140,385,269	140,385,441	140,385,442	140,385,478	140,385,541	140,385,754	140,385,791	140,385,857	140,385,957	140,385,986	140,386,046	140,386,075	140,386,187	140,386,202	140,386,209	140,386,215	140,386,249	140,386,400	140,386,406	140,386,478	140,386,504	140,386,629	140,386,637	140,386,662	140,386,687	140,387,004	140,387,078	140,387,575	140,387,877	140,388,834	140,388,865	140,389,048	140,389,904	140,390,233	140,390,246	140,390,298	140,390,370	140,390,380	140,390,725	140,391,138	140,391,181	140,391,581	140,391,639	140,391,860	140,391,934	140,391,954	140,393,223	140,393,793	140,394,036	140,394,048	140,394,278	140,394,410	140,394,718	140,394,876	140,394,898	140,395,475	140,396,563	140,396,836	140,396,844	140,397,349	140,397,867	140,397,920	140,398,151	140,398,499	140,398,645	140,398,732	140,398,852	140,399,051	140,399,089	140,399,315	140,399,407	140,399,962	140,400,032	140,400,041	140,400,736	140,400,972	140,401,239	140,401,385	140,401,386	140,401,395	140,401,397	140,401,627	140,401,638	140,401,692	140,401,896	140,402,324	140,402,343	140,402,490	140,402,624	140,402,804	140,402,945	140,403,083	140,403,494	140,403,572	140,403,774	140,403,895	140,404,380	140,404,420	140,404,589	140,404,743	140,404,913	140,405,733	140,405,786	140,406,324	140,406,334	140,406,482	140,406,483	140,406,559	140,407,145	140,407,166	140,407,186	140,407,287	140,407,481	140,407,620	140,407,777	140,407,799	140,407,882	140,407,911	140,407,942	140,408,083	140,408,116	140,408,824	140,408,943	140,409,214	140,409,409	140,409,974	140,410,130	140,410,437	140,410,705	140,410,806	140,410,881	140,410,949	140,411,189	140,411,221	140,411,272	140,411,279	140,412,177	140,412,472	140,412,660	140,412,884	140,413,275	140,413,276	140,413,479	140,413,737	140,413,795	140,413,886	140,413,887	140,413,960	140,414,014	140,414,275	140,414,350	140,414,353	140,414,423	140,414,820	140,414,925	140,415,040	140,415,111	140,415,114	140,415,168	140,415,190	140,415,230	140,415,508	140,415,530	140,415,874	140,416,098	140,416,290	140,416,539	140,416,806	140,416,812	140,417,031	140,417,096	140,417,309	140,417,466	140,417,491	140,417,551	140,418,022	140,418,028	140,418,333	140,419,277	140,419,464	140,419,582	140,419,807	140,420,268	140,420,525	140,420,607	140,420,673	140,420,980	140,421,406	140,421,635	140,421,968	140,422,077	140,422,505	140,422,786	140,423,309	140,423,317	140,423,383	140,423,442	140,423,636	140,423,644	140,423,974	140,424,162	140,424,246	140,424,291	140,424,551	140,424,553	140,424,692	140,424,872	140,424,904	140,424,905	140,425,526	140,425,911	140,426,266	140,426,267	140,426,459	140,426,460	140,427,186	140,427,224	140,427,466	140,428,026	140,428,158	140,428,312	140,428,314	140,428,426	140,428,438	140,428,572	140,428,911	140,428,989	140,429,276	140,429,772	140,429,815	140,429,818	140,429,820	140,430,200	140,430,270	140,430,290	140,433,200	140,433,328	140,434,061	140,434,109	140,434,266	140,435,400	140,436,570	140,436,827	140,436,846	140,437,554	140,437,557	140,438,836	140,438,999	140,439,010	140,439,027	140,439,029	140,439,036	140,439,643	140,440,307	140,440,631	140,441,970	140,441,977	140,442,507	140,443,143	140,443,216	140,443,569	140,444,242	140,445,051	140,445,117	140,445,614	140,446,262	140,446,487	140,446,683	140,446,800	140,447,491	140,447,759	140,448,231	140,448,544	140,448,591	140,449,462	140,451,857	140,451,903	140,451,908	140,451,909	140,452,216	140,452,333	140,452,541	140,452,881	140,453,039	140,453,047	140,453,068	140,453,161	140,453,517	140,453,646	140,453,786	140,454,163	140,454,248	140,454,951	140,455,130	140,455,132	140,455,211	140,455,213	140,455,304	140,458,401	140,459,120	140,460,790	140,460,830	140,461,171	140,461,259	140,461,458	140,461,472	140,461,584	140,461,811	140,462,191	140,462,223	140,462,503	140,463,063	140,463,167	140,463,174	140,463,353	140,463,625	140,464,313	140,464,543	140,465,424	140,465,708	140,465,827	140,466,064	140,466,943	140,467,005	140,467,058	140,467,626	140,467,628	140,468,863	140,469,105	140,469,459	140,469,516	140,470,320	140,470,406	140,470,420	140,470,718	140,470,730	140,471,024	140,471,134	140,471,556	140,471,794	140,471,897	140,472,359	140,473,037	140,473,418	140,473,439	140,473,453	140,473,568	140,473,569	140,473,788	140,473,970	140,474,709	140,474,774	140,474,793	140,474,877	140,474,977	140,475,517	140,475,967	140,475,988	140,476,278	140,476,491	140,476,814	140,477,512	140,477,641	140,477,771	140,478,102	140,478,106	140,478,155	140,478,185	140,478,696	140,478,704	140,478,809	140,480,127	140,481,305	140,481,443	140,481,445	140,481,446	140,481,862	140,481,863	140,481,960	140,482,061	140,482,518	140,482,633	140,482,931	140,482,970	140,483,201	140,483,488
G	T	-	-	C	C	G	G	A	T	-	T	-	A	A	-	-	-	C	C	A	A	-	9	G	T	-	2	C	C/7	8/-	T	-	G	A	T	C	G	T	A	C	T	-	-	G	C	T	C	T	G	C	2	-	2	G	T	T	T	T	-	A	C	C	G	2	G	G	C	T	2	G	A	10	T	T	T	G	C	T	T	G	G	2	G	A	G	C	G	AG/3	-	A	G	T	2	5	7	G	G	T	-	A	T	C	A	7	T	A	3	G	A	G	T	C	-	15	-	A	2	C	G	2	-	C	T	2	2	T	37	A	C	G	T	A	A	C	C	G	G	G	G	-	T	C	A	C	C	C	-	G	-	G	C	T/2	-	10	A	C	T	G	C	G	6	C	A	T	A	G	-	A	9	G	G	C	G	C	T	C	-	G	G	-	G	T	9	-	A	T	3	5	G	C	5	G	C	3	-	G	24/-	20/-	C	T	G	T	2	-	A	G	G	C	-	T	T	G	T	2	C	G	A	C	A	T	T	T	C	T	G	A	-	C	C	C	13	2	5	C	A	G	A	2	A	A	A	G	-	T	G	T	A	A	C	A	C	C	2	G	A	A	A	3/-	2/-	A/4	-	-	130	C	C	A	7	-	C	6/-	C	C	A	-	G	T	2	T	G	A	A/G	G	G	C	4/3	A	G	G	G	C	G	C	G	-	A	G	A	-	T	G	G	8/-	3	T	G	C	T	T	C	-	C	-	T	-	G	T	49	A	2	G	C	A	-	2/-	A/-	G	18	C	G	C	T	A	4	A/-	G	C	9	3	G	10	-	C	G	C	G	7	T	G	C	C	G	G	G	T	9	13	G	T	G	G	A	G	A	C	A	G	A	-	G	A	G	A	-	C	-	C	G	C	A	A	T	A	C	C	A	C	T	C	G	G	G	T	G/4	-	G	T	T	T	A	A	-	G	C	G	C	C	3	-	C	T	C	C	G	C	C	T	C	C	G	3	3	T	C	G	7	3	A	A	G	T	66	T