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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 9,570 (bp)   Positions: 361
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.013
.031
.011
.021
.0
.0
.001
.005
.007
.65
.008
.125
.012
.0
.004
.095
.008
.0
.001
.007
.001
.0
.005
.002
.01
.036
.318
.394
.828
.744
.635
.398
.038
.16
.638
.076
.532
.553
.573
.46
.456
.428
.423
.024
.058
.066
.069
.07
.047
.028
.016
.013
.032
.015
.005
.114
.034
.021
.057
.039
.128
.001
.001
.005
.007
.043
.028
.014
.017
.265
.142
.01
.004
.001
.01
.0
.002
.0
.0
.004
.0
.001
.0
.001
.0
.001
.004
.0
.001
.004
.035
.001
.002
.016
.003
.01
.0
.086
.002
.032
.277
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.007
.001
.002
.003
.054
.065
.028
.055
.034
.014
.013
.005
.003
.003
.001
.004
.012
.007
.029
.001
.001
.017
.009
.01
.038
.12
.037
.002
.001
.002
.005
.014
.214
.126
.008
.283
.029
.002
.015
.015
.001
.001
.004
.023
.019
.031
.15
.0
.0
.0
.0
.0
.001
.525
.66
.873
.114
.376
.406
.29
.005
.837
.19
.185
.193
.003
.209
.001
.001
.004
.017
.151
.009
.0
.277
.0
.0
.001
.001
.018
.012
.01
.021
.009
.009
.013
.023
.105
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.017
.012
.038
.06
.008
.007
.003
.012
.012
.003
.009
.012
.027
.025
.006
.01
.015
.021
.002
.016
.007
.018
.027
.01
.001
.003
.004
.01
.026
.032
.046
.033
.025
.019
.035
.021
.021
.003
.003
.003
.003
.034
.052
.062
.015
.011
.042
.033
.095
.034
.013
.016
.062
.092
.107
.109
.09
.07
.068
.046
.068
.385
.418
.577
.508
.359
.133
.016
.037
.043
.04
.044
.073
.023
.008
.006
.001
.011
.008
.002
.005
.06
.018
.077
.232
.336
.156
.141
.014
.026
.084
.09
.159
.039
.01
.021
.01
.001
.003
.021
.773
.832
.418
.124
.982
.869
1.0
.577
.151
.979
.1
.012
.186
.0
.002
.947
.0
.011
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
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--
--
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--
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--
--
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--
--
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--
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--
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--
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--
--
--
--
--
T
A
C
T
T
T
T
G
A
G
T
G
A
G
T
4
C
G
G
A
C
G
T
C
C
T
T
C
A
A
A
A
C
C
T
C
A
2
2
C
C
C
C
C
T
C
T
T
A
A
C
C
C
6
G
T
G
G
T
T
T
C
G
G
T
G
A
C
A
A
2
T
G
A
A
C
C
G
T
C
A
C
A
C
A
A
6
A
4
A
T
C
C
T
G
A
G
G
A
C
A
G
T
A
T
C
G
G
G
C
A
A
T
T
A
T
A
G
A
A
A
T
2
2
A
T
C
C
C
C
G
G
A
T
A
G
G
T
A
G
C
T
T
A
A
A
T
G
A
A
G
T
G
A
C
A
A
C
T
A
G
T
A
T
A
A
A
A
A
A
3
A
C
C
T
T
A
T
A
C
C
A
T
T
A
T
A
A
G
A
A
A
T
C
C
C
G
C
G
T
T
T
A
3
A
A
C
A
A
G
G
A
A
A
3
T
G
T
T
2
C
A
C
G
T
T
C
T
T
T
T
G
C
A
4
A
G
G
2
A
8
T
G
G
A
13
7
G
T
8
T
A
C
T
G
A
C
T
A
G
A
T
G
A
A
T
T
G
G
G
T
A
G
C
A
C
A
T
T
G
T
C
C
T
T
G
A
C
23
T
T
G
A
C
T
G
C
G
C
C
C
T
T
G
A
A
C
G
G
G
G
T
C
A
C
G
A
G
8
T
C
3
C
C
G
G
C
C
C
A
C
A
C
G
T
A
T
G
G
C
C
A
T
A
G
G
A
T
C
C
T
T
T
C
A
C
T
A
A
T
T
  6,167,868
  6,167,873
  6,167,930
  6,167,978
  6,168,025
  6,168,116
  6,168,167
  6,168,186
  6,168,198
  6,168,316
  6,168,339
  6,168,355
  6,168,393
  6,168,411
  6,168,473
  6,168,493
  6,168,514
  6,168,517
  6,168,521
  6,168,551
  6,168,621
  6,168,628
  6,168,636
  6,168,666
  6,168,694
  6,168,714
  6,168,760
  6,168,768
  6,168,803
  6,168,813
  6,168,818
  6,168,823
  6,168,952
  6,168,963
  6,168,983
  6,169,042
  6,169,060
  6,169,062
  6,169,067
  6,169,081
  6,169,082
  6,169,086
  6,169,160
  6,169,253
  6,169,262
  6,169,266
  6,169,268
  6,169,269
  6,169,277
  6,169,279
  6,169,280
  6,169,281
  6,169,315
  6,169,346
  6,169,381
  6,169,443
  6,169,460
  6,169,486
  6,169,500
  6,169,508
  6,169,530
  6,169,566
  6,169,568
  6,169,573
  6,169,575
  6,169,593
  6,169,600
  6,169,608
  6,169,609
  6,169,638
  6,169,642
  6,169,647
  6,169,649
  6,169,661
  6,169,690
  6,169,748
  6,169,834
  6,169,843
  6,169,853
  6,169,902
  6,169,913
  6,169,952
  6,169,954
  6,170,033
  6,170,034
  6,170,039
  6,170,044
  6,170,057
  6,170,060
  6,170,064
  6,170,101
  6,170,143
  6,170,156
  6,170,181
  6,170,211
  6,170,303
  6,170,317
  6,170,332
  6,170,367
  6,170,394
  6,170,407
  6,170,497
  6,170,509
  6,170,516
  6,170,524
  6,170,529
  6,170,544
  6,170,558
  6,170,577
  6,170,588
  6,170,593
  6,170,601
  6,170,633
  6,170,673
  6,170,729
  6,170,749
  6,170,758
  6,170,762
  6,170,771
  6,170,797
  6,170,806
  6,170,839
  6,170,857
  6,170,864
  6,170,868
  6,170,936
  6,170,960
  6,170,971
  6,170,982
  6,171,031
  6,171,049
  6,171,051
  6,171,056
  6,171,064
  6,171,065
  6,171,094
  6,171,098
  6,171,107
  6,171,137
  6,171,170
  6,171,211
  6,171,214
  6,171,238
  6,171,263
  6,171,266
  6,171,277
  6,171,299
  6,171,324
  6,171,332
  6,171,339
  6,171,344
  6,171,355
  6,171,362
  6,171,374
  6,171,413
  6,171,427
  6,171,525
  6,171,532
  6,171,544
  6,171,560
  6,171,561
  6,171,577
  6,171,579
  6,171,587
  6,171,595
  6,171,606
  6,171,624
  6,171,650
  6,171,677
  6,171,706
  6,171,708
  6,171,712
  6,171,718
  6,171,719
  6,171,726
  6,171,731
  6,171,752
  6,171,763
  6,171,769
  6,171,770
  6,171,780
  6,171,792
  6,171,820
  6,171,861
  6,171,862
  6,171,863
  6,171,880
  6,171,884
  6,171,891
  6,171,892
  6,171,894
  6,171,912
  6,171,913
  6,171,935
  6,171,937
  6,171,961
  6,172,024
  6,172,027
  6,172,043
  6,172,044
  6,172,057
  6,172,096
  6,172,098
  6,172,107
  6,172,126
  6,172,129
  6,172,171
  6,172,185
  6,172,277
  6,172,299
  6,172,314
  6,172,317
  6,172,322
  6,172,324
  6,172,327
  6,172,336
  6,172,343
  6,172,349
  6,172,367
  6,172,377
  6,172,408
  6,172,420
  6,172,423
  6,172,437
  6,172,449
  6,172,452
  6,172,516
  6,172,525
  6,172,532
  6,172,542
  6,172,550
  6,172,593
  6,172,645
  6,172,686
  6,172,689
  6,172,694
  6,172,696
  6,172,698
  6,172,946
  6,172,983
  6,172,995
  6,173,016
  6,173,017
  6,173,035
  6,173,058
  6,173,069
  6,173,085
  6,173,144
  6,173,153
  6,173,172
  6,173,188
  6,173,189
  6,173,200
  6,173,204
  6,173,231
  6,173,237
  6,173,245
  6,173,249
  6,173,251
  6,173,253
  6,173,278
  6,173,301
  6,173,344
  6,173,361
  6,173,416
  6,173,425
  6,173,437
  6,173,463
  6,173,467
  6,173,472
  6,173,485
  6,173,494
  6,173,499
  6,173,502
  6,173,645
  6,173,654
  6,173,662
  6,173,672
  6,173,686
  6,173,697
  6,173,726
  6,173,727
  6,173,734
  6,173,736
  6,173,745
  6,173,747
  6,173,805
  6,173,849
  6,173,857
  6,174,071
  6,174,086
  6,174,113
  6,174,123
  6,174,129
  6,174,130
  6,174,138
  6,174,143
  6,174,152
  6,174,159
  6,174,162
  6,174,164
  6,174,229
  6,174,267
  6,174,281
  6,174,302
  6,174,303
  6,174,312
  6,174,329
  6,174,372
  6,174,387
  6,174,452
  6,174,481
  6,174,526
  6,174,534
  6,174,536
  6,174,540
  6,174,553
  6,174,563
  6,174,570
  6,174,599
  6,174,639
  6,174,648
  6,174,716
  6,174,728
  6,174,757
  6,174,765
  6,174,793
  6,174,811
  6,174,815
  6,174,904
  6,174,905
  6,174,920
  6,174,927
  6,174,934
  6,174,942
  6,174,965
  6,175,070
  6,175,107
  6,175,125
  6,175,132
  6,175,134
  6,175,140
  6,175,204
  6,175,232
  6,175,283
  6,175,310
  6,175,315
  6,175,339
  6,175,350
  6,175,360
  6,175,376
  6,175,392
  6,175,417
  6,175,438
  6,175,445
  6,175,462
  6,175,502
  6,175,605
  6,176,176
  6,176,283
  6,177,013
C
G
T
C
G
G
C
T
G
C
C
A
G
A
G
-
2
T
C
G
T
A
C
T
T
C
C
T
G
C
5
T
T
T
C
T
T
-
-
T
3
-
-
C/T
C
2
3
2
A/8
A/G
C/2
C/A
-
-
C
C
A
3
C
T/C
A
T
T
A
C
A
G
G
T
A/4
2/-
A
A
G
G
2
T
A
C
G
C
A
C
T
C
G
-
-
-
T
C
T
T
C
C
C
T
A
G
T
T
A
C
T
C
T
A
A
2
G
C
G
3
C
C
C
G
-
G
4
C/T
C
-
-
G
C
A
T
T
T
A
2
-
G
T
7
-
2
G
A
A
6
C
G
T
G
-
A
C
C
C
G
31
T
T
G
G
T
G
G
5
G
T
A
G
G
G
G
C
G
-
4
T
T
C
C
G
C
T
A
A
G
A
A
G
G
T
G
A
G
C
T
A
T
T
G
C
T
A
A
C
C
T
-
C
G
-
C
G
A
T
G
5
-
-
A
T
C
2
-
8
5
T
A
C
G
G
C
C
C
4
T
T
-
-
T
T
T
-
G
-
C
A
A
G
-
-
-
C
-
G
G
T
2
T
G
T
A
G
T
G
C
A
C
G
C
C
A
9
3
G
G
C
C/T
G
T
C
G
C
A
A
T
T
C
A
A
G
T
-
A
C
A
-
T
G
A
T
A
A
-
T
C
G
A
G
G
-
T
A
C
A
C
T
G
T
A
C
A
-
A
-
-
T
T
A
A
T
T
G
G
T
G
T
A
A
G
C
C
-
T
T
G
C
G
A
A
G
C
G
T
C
C
C
A
C
G
G
G
G
T/C
C