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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 9,570 (bp)   Positions: 250
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
COP/CrCrl (MCW & UW) 
.012
.001
.001
.013
.031
.011
.001
.021
.0
.0
.001
.001
.001
.0
.0
.0
.0
.01
.007
.001
.021
.0
.023
.187
.008
.125
.006
.001
.012
.009
.007
.0
.004
.008
.0
.023
.007
.0
.005
.002
.036
.412
.387
.285
.318
.83
.815
.635
.532
.398
.859
.386
.163
.138
.026
.393
.27
.405
.128
.005
.007
.028
.014
.013
.002
.0
.0
.0
.004
.0
.001
.0
.024
.002
.001
.0
.001
.004
.004
.0
.001
.003
.186
.009
.016
.001
.016
.003
.0
.004
.021
.133
.0
.086
.002
.0
.032
.007
.001
.003
.06
.054
.065
.028
.004
.019
.031
.15
.0
.0
.001
.001
.018
.012
.021
.032
.027
.009
.009
.01
.013
.023
.003
.024
.081
.098
.105
--
--
--
--
--
--
--
--
--
--
--
--
.021
.002
.018
.027
.01
.016
.001
.001
.003
.004
.004
.01
.01
.026
.032
.096
.112
.064
.033
.021
.003
.003
.031
.034
.07
.071
.221
.015
.011
.067
.042
.033
.095
.035
.034
.062
.092
.107
.109
.09
.068
.046
.068
.385
.418
.577
.508
.359
.133
.016
.037
.017
.016
.043
.04
.044
.073
.023
.008
.006
.001
.015
.021
.011
.008
.034
.002
.005
.06
.018
.077
.232
.336
.156
.141
.014
.026
.084
.09
.159
.323
.215
.308
.359
.039
.01
.021
.01
.001
.003
.021
.773
.832
.418
.124
.982
.869
1.0
.577
.151
.979
.1
.012
.186
.0
.002
.947
.0
.0
.011
.081
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
RT1-Db1
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--
G
G
T
T
A
C
A
T
C
T
T
T
T
T
G
T
T
C
A
C
C
G
C
T
T
G
T
A
G
C
7
C
T
C
G
T
A
G
T
C
T
A
T
T
T
C
C
A
C
A
G
A
C
C
T
A
G
A
T
G
T
A
G
A
C
G
T
C
C
A
C
A
T
A
G
A
A
7
6
A
4
A
7
C
C
G
T
G
A
A
A
16
G
G
A
C
C
T
2
A
C
T
C
C
T
A
A
A
G
C
G
T
T
T
3
T
T
A
A
C
C
A
C
T
C
T
A
A
T
G
T
T
C
T
T
A
G
A
T
A
T
A
T
T
T
G
A
G
G
G
G
T
A
G
A
A
G
A
T
C
T
C
T
G
G
G
C
23
C
T
T
G
A
A
G
C
G
C
C
T
T
G
A
A
C
G
G
G
G
T
C
C
C
A
C
G
A
G
8
T
T
C
C
3
C
C
C
G
G
C
C
C
A
C
A
C
G
T
A
C
G
A
G
T
G
G
C
C
A
T
A
G
G
A
T
C
C
T
T
T
C
A
C
T
A
A
T
G
T
8
  6,167,826
  6,167,835
  6,167,843
  6,167,868
  6,167,873
  6,167,930
  6,167,951
  6,167,978
  6,168,023
  6,168,025
  6,168,033
  6,168,039
  6,168,053
  6,168,057
  6,168,058
  6,168,069
  6,168,116
  6,168,124
  6,168,198
  6,168,217
  6,168,257
  6,168,264
  6,168,291
  6,168,326
  6,168,339
  6,168,355
  6,168,387
  6,168,413
  6,168,418
  6,168,431
  6,168,435
  6,168,460
  6,168,473
  6,168,514
  6,168,517
  6,168,545
  6,168,551
  6,168,628
  6,168,636
  6,168,666
  6,168,714
  6,168,735
  6,168,744
  6,168,750
  6,168,760
  6,168,802
  6,168,806
  6,168,818
  6,168,821
  6,168,823
  6,168,848
  6,168,913
  6,168,921
  6,168,923
  6,168,949
  6,169,115
  6,169,151
  6,169,159
  6,169,530
  6,169,573
  6,169,575
  6,169,600
  6,169,603
  6,169,825
  6,169,834
  6,169,843
  6,169,853
  6,169,880
  6,169,902
  6,169,913
  6,169,952
  6,169,954
  6,169,992
  6,170,015
  6,170,016
  6,170,034
  6,170,039
  6,170,042
  6,170,044
  6,170,057
  6,170,060
  6,170,063
  6,170,108
  6,170,129
  6,170,136
  6,170,150
  6,170,181
  6,170,211
  6,170,235
  6,170,237
  6,170,275
  6,170,289
  6,170,317
  6,170,332
  6,170,367
  6,170,370
  6,170,394
  6,170,839
  6,170,857
  6,170,868
  6,170,924
  6,170,936
  6,170,960
  6,170,971
  6,171,587
  6,171,606
  6,171,624
  6,171,650
  6,172,024
  6,172,027
  6,172,043
  6,172,044
  6,172,057
  6,172,096
  6,172,107
  6,172,113
  6,172,115
  6,172,126
  6,172,129
  6,172,136
  6,172,171
  6,172,185
  6,172,225
  6,172,232
  6,172,237
  6,172,267
  6,172,277
  6,172,295
  6,172,436
  6,172,443
  6,172,449
  6,172,452
  6,172,516
  6,172,525
  6,172,532
  6,172,570
  6,172,593
  6,172,734
  6,172,744
  6,173,278
  6,173,301
  6,173,416
  6,173,425
  6,173,437
  6,173,448
  6,173,463
  6,173,465
  6,173,467
  6,173,470
  6,173,472
  6,173,480
  6,173,485
  6,173,494
  6,173,499
  6,173,569
  6,173,574
  6,173,615
  6,173,645
  6,173,686
  6,173,734
  6,173,736
  6,173,743
  6,173,745
  6,173,751
  6,173,752
  6,173,771
  6,173,849
  6,173,857
  6,173,980
  6,174,071
  6,174,086
  6,174,113
  6,174,121
  6,174,123
  6,174,138
  6,174,143
  6,174,152
  6,174,159
  6,174,162
  6,174,229
  6,174,267
  6,174,281
  6,174,302
  6,174,303
  6,174,312
  6,174,329
  6,174,372
  6,174,387
  6,174,452
  6,174,481
  6,174,497
  6,174,522
  6,174,526
  6,174,534
  6,174,536
  6,174,540
  6,174,553
  6,174,563
  6,174,570
  6,174,599
  6,174,617
  6,174,618
  6,174,639
  6,174,648
  6,174,674
  6,174,716
  6,174,728
  6,174,757
  6,174,765
  6,174,793
  6,174,811
  6,174,815
  6,174,904
  6,174,905
  6,174,920
  6,174,927
  6,174,934
  6,174,942
  6,174,965
  6,174,998
  6,175,016
  6,175,019
  6,175,039
  6,175,070
  6,175,107
  6,175,125
  6,175,132
  6,175,134
  6,175,140
  6,175,204
  6,175,232
  6,175,283
  6,175,310
  6,175,315
  6,175,339
  6,175,350
  6,175,360
  6,175,376
  6,175,392
  6,175,417
  6,175,438
  6,175,445
  6,175,462
  6,175,502
  6,175,605
  6,176,176
  6,176,283
  6,176,660
  6,177,013
  6,177,287
A
C
C
C
G
T
G
C
3
G
C
G
C
C
C
C
G
G
G
T
2
A
T
C
C
A
T/C
2
G/C
C/T
-
C/T
G
2
T
C
G
A
C
T
C
G
C
C
C
A
A
A/5
5/G
T
-
G
T
G
C
-
T
2
A
A
C
G
A
G
T
A
C
A
G
C
A
C
A
9
9
C
G
-
-
-
-
-
-
T
T
2
C
C
G
G
T
-
C
A
G
T
T
C
-
G
G
C
A
T
A
G
G
G
C
T
A
A
C
C
-
2
3
C
G
T
-
C
T
G
G
-
G
2
A
A
C
G
G
C
C
G
T
-
16
G
C
G
C
C
G
A
6
9
5
6
A
G
G
C
T
G
2
G
C/A
T
C
G
A
A
A
A
T
-
T
A
C
A
-
-
A
T
A
A
-
C
G
A
G
G
-
T
A
C
A
C
T
T
T
G
T
A
C
A
-
A
A
A
-
-
G
T
T
A
A
T
T
G
G
T
G
T
A
A
G
T
A
T
A
C
C
-
T
T
G
C
G
A
A
G
C
G
T
C
C
C
A
C
G
G
G
G
C
A
C
-