Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 25,482 (bp)   Positions: 53
Conservation 
Genes ( + ) 
Genes ( - ) 
RGSC 3.4  
SS/Jr (ICL) 
.0
.0
.013
.001
--
.0
--
.0
.0
.006
.038
.001
.0
.001
.013
.005
.03
.154
.014
.012
.009
.0
.004
.02
.002
.0
.027
.0
.0
.003
.0
.001
.56
.003
.006
.0
.031
.006
--
.0
.01
.002
.003
.006
.507
.01
.001
.002
.0
.004
.004
.0
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
RGD1359108
RGD1359108
RGD1359108
RGD1359108
RGD1359108
RGD1359108
C
T
C
C
T
G
T
G
T
G
A
C
T
G
A
C
T
T
T
T
T
T
A
T
C
G
C
T
A
A
G
G
A
T
A
A
C
A
A
G
T
G
G
A
T
T
T
C
A
A
G
A
C
  51,840,383
  51,846,261
  51,846,488
  51,847,638
  51,848,883
  51,850,564
  51,852,129
  51,852,805
  51,853,277
  51,853,538
  51,853,564
  51,853,663
  51,853,976
  51,854,645
  51,855,051
  51,855,223
  51,855,328
  51,855,364
  51,855,467
  51,855,470
  51,855,473
  51,856,049
  51,856,584
  51,856,724
  51,856,965
  51,856,999
  51,857,782
  51,858,013
  51,858,019
  51,858,041
  51,858,206
  51,858,318
  51,858,447
  51,858,600
  51,858,655
  51,859,483
  51,860,115
  51,860,245
  51,860,542
  51,860,866
  51,860,902
  51,861,025
  51,861,413
  51,861,497
  51,862,308
  51,862,397
  51,862,638
  51,863,570
  51,864,177
  51,864,200
  51,864,205
  51,864,511
  51,865,124
T
C
G
T
C
T
C
A
C
T
C
T
C
A
G
T
C
C
C
C
C
G
G
A
G
A
T
G
T
G
T
A
C
G
T
G
T
G
G
T
C
A
A
C
G
A
G
T
T
C
C
T
T