Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 67,852 (bp)   Positions: 167
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
ACI/N (KNAW) 
.001
.0
.001
.002
.003
.011
.011
.305
.396
.122
.189
.133
.031
.001
.066
.0
.222
.98
.01
.015
.003
.057
--
--
--
--
--
.05
.043
.009
.064
.099
--
--
--
--
--
.116
.171
.128
.274
.022
.021
.395
.117
.011
.021
.149
.545
.216
.0
.001
.405
.009
.035
.01
.027
--
--
--
.169
.002
.001
.005
.007
.007
.001
.001
.002
.086
.004
.0
.001
.018
.0
.0
--
.001
.007
.001
.013
.002
.099
.295
.026
.036
.561
.002
.032
.011
.002
.017
.009
.003
.006
.007
.0
.018
.002
.396
.073
.096
.022
.024
.083
.25
.248
.109
.37
.029
.197
.021
.001
.289
.012
.0
.002
.029
.001
.0
.0
.383
.085
--
.157
.016
.015
.277
--
--
--
--
--
--
.038
.001
.001
.028
.021
.286
.028
.116
.002
.003
.056
.032
.665
.008
.012
.023
.016
.153
.004
.108
.032
.003
.005
.017
.001
.102
.007
.003
.0
.06
.001
.0
.057
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
Prkaa2
A
G
G
T
A
T
A
G
G
G
A
G
A
T
A
C
A
C
T
C
A
C
A
A
T
G
A
A
T
G
A
T
T
G
G
T
G
T
C
T
C
A
G
T
A
G
A
T
G
A
A
C
G
T
120
C
C
G
G
T
G
C
C
A
A
A
T
G
G
G
A
C
G
G
2
T
T
G
T
C
G
A
C
A
C
C
A
T
A
G
A
T
T
4
16
G
C
T
C
T
A
G
G
T
T
A
G
C
A
T
A
C
A
T
3
C
C
T
A
C
G
A
A
G
C
A
C
G
G
C
C
C
C
G
A
C
T
2
A
T
G
A
C
C
C
C
A
A
A
A
G
A
A
T
G
G
T
T
C
A
G
C
T
T
G
A
T
  128,437,289
  128,437,850
  128,438,156
  128,438,168
  128,438,346
  128,438,609
  128,438,618
  128,439,100
  128,439,122
  128,439,335
  128,439,386
  128,439,555
  128,439,972
  128,439,985
  128,440,030
  128,440,166
  128,440,262
  128,440,813
  128,441,134
  128,441,350
  128,441,422
  128,441,794
  128,442,385
  128,442,523
  128,442,780
  128,442,985
  128,443,004
  128,443,136
  128,443,533
  128,443,539
  128,443,801
  128,444,007
  128,444,647
  128,444,876
  128,445,144
  128,445,310
  128,445,505
  128,446,053
  128,446,088
  128,446,098
  128,446,969
  128,447,313
  128,447,324
  128,447,546
  128,447,698
  128,448,252
  128,448,355
  128,449,058
  128,449,925
  128,450,593
  128,450,796
  128,450,801
  128,450,834
  128,451,003
  128,451,342
  128,451,677
  128,452,243
  128,452,643
  128,452,644
  128,452,760
  128,452,995
  128,453,707
  128,453,708
  128,453,868
  128,453,988
  128,454,154
  128,455,018
  128,455,064
  128,455,080
  128,455,086
  128,455,154
  128,455,366
  128,455,382
  128,455,849
  128,456,027
  128,456,487
  128,457,322
  128,457,566
  128,457,946
  128,457,958
  128,458,259
  128,459,029
  128,459,152
  128,459,300
  128,459,514
  128,459,752
  128,459,798
  128,459,863
  128,460,131
  128,460,169
  128,460,285
  128,460,383
  128,460,384
  128,460,465
  128,460,518
  128,460,706
  128,460,731
  128,460,845
  128,460,919
  128,461,185
  128,461,393
  128,462,501
  128,462,701
  128,462,732
  128,462,748
  128,462,794
  128,462,930
  128,463,102
  128,463,232
  128,463,319
  128,463,367
  128,466,257
  128,467,705
  128,468,313
  128,468,828
  128,469,099
  128,470,067
  128,470,239
  128,470,358
  128,471,019
  128,472,304
  128,472,675
  128,473,184
  128,474,921
  128,475,604
  128,475,643
  128,475,664
  128,479,957
  128,481,169
  128,482,616
  128,482,617
  128,482,620
  128,482,621
  128,483,197
  128,486,559
  128,486,562
  128,488,424
  128,492,183
  128,494,095
  128,495,756
  128,497,032
  128,498,144
  128,498,286
  128,498,333
  128,498,420
  128,498,457
  128,498,876
  128,499,083
  128,499,086
  128,499,196
  128,499,562
  128,500,197
  128,500,550
  128,500,814
  128,500,883
  128,500,898
  128,501,047
  128,501,193
  128,501,227
  128,501,448
  128,501,823
  128,502,143
  128,502,154
  128,502,184
  128,502,349
  128,502,569
  128,502,978
G
A
A
C
G
5
G
A
G/A
T
G
A
G
A
G
T
G
T
A
T
A/G
G
G
G
C
A
G
G
3
A
G
C
G
A
A
2
C
C
T
3
C/T
G
G/A
C
A/G
A
G
G
A
G
A/C
C/2
A
G
-
T
T
A
A
2
A
C/T
C/T
G
T
G
C
A
T
A
2
G
C
T
-
C
C
A
A
T
A
A/-
T
C
T
T
-
C
T
A
G
2
G
-
16/-
A
A
C
T
T/4
A/6
T
2
C
T/C
G
A
A
G
C
C
G
G
A
-
T
T
C
C
T
A
G
C
A
T
T
T
A
A
C/A
C/T
C/G
C/A
G/A
G
4
C
-
-
C
3
-
T
T
T
G
G
G
G
2
A
2
G
C
A
-
C
A
T
T
A
T
2
C
A
A/G
T/-