Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 188,155 (bp)   Positions: 286
Conservation 
Genes ( + ) 
Genes ( - ) 
RGSC 3.4  
.002
.05
.004
.001
.012
.0
.705
.007
.0
.0
.0
.601
.0
.0
.0
.003
.0
.015
--
.028
.517
.001
.0
.003
.001
.001
.0
.191
.003
.001
.019
.02
.003
.013
.011
.0
.014
.004
.018
.0
.004
.001
.0
.002
.902
.004
.01
.004
.006
.0
.003
.002
--
.001
.001
.0
.019
.002
.007
.965
.004
.124
.0
.003
--
.004
.119
.003
.0
.002
.002
.001
.001
.001
.004
.0
.0
.003
.012
--
.021
.0
.0
.0
.56
.718
.011
.001
.006
.002
.0
.0
1.0
.003
.021
.004
.041
.005
.0
.014
.0
.028
.0
.007
.059
.0
.057
.021
.441
.168
.0
--
.278
.024
.001
.0
.003
--
--
--
--
.163
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.01
--
--
--
--
--
--
--
.001
.036
.022
.0
.007
.001
.002
.007
.0
.0
--
--
--
--
--
.013
.286
.0
.018
.009
.268
.0
.0
.003
.012
.029
.0
.0
.001
.001
.001
.001
.005
--
--
--
--
--
--
--
--
.0
.007
.231
.118
.005
.017
.266
.003
.0
.021
.001
.023
.005
.004
.039
.379
.009
.0
.022
.013
.012
.018
.0
.0
.001
.001
.022
.172
--
--
--
--
--
.0
.004
.004
.001
.001
.0
.97
--
--
.001
.001
.0
.184
.032
--
.024
.001
.061
.003
.0
--
--
--
--
--
--
--
--
--
--
.0
.002
.001
.0
.0
.002
.005
.001
.005
.003
.0
--
.002
.146
.01
.002
.001
.008
.0
.006
.004
--
.009
.015
.002
.019
.065
.861
.0
.051
.042
.001
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
Phkb
G
T
G
T
T
G
A
G
T
A
C
A
C
T
T
T
C
G
T
A
T
T
G
T
C
C
T
C
A
G
G
A
C
G
T
T
C
G
T
A
A
A
A
G
A
G
C
C
G
C
T
T
A
T
A
C
A
T
A
T
G
A
A
C
T
G
A
A
C
C
C
C
A
A
G
G
T
C
C
G
C
G
G
A
G
T
A
C
C
A
A
C
A
C
A
A
T
G
A
A
G
C
A
T
T
G
A
C
T
A
T
G
C
C
A
G
T
A
T
A
C
C
A
G
A
G
T
G
C
T
T
A
C
A
A
C
T
C
T
A
C
T
G
C
T
C
T
A
T
C
T
A
T
T
T
A
T
C
A
A
T
A
A
A
A
G
T
G
G
A
G
C
A
C
G
G
C
G
G
T
G
A
A
A
G
A
G
C
C
T
T
G
T
G
A
C
C
C
C
G
A
T
C
A
C
T
A
A
A
T
T
T
C
C
C
G
T
A
A
C
A
C
T
C
G
G
A
G
A
T
A
C
G
A
C
C
G
C
C
T
A
C
C
T
C
A
T
A
A
A
C
G
G
G
A
G
G
T
G
A
T
T
A
A
A
C
T
A
G
C
T
C
A
C
G
G
T
T
T
C
T
T
C
C
A
C
  22,374,593
  22,376,309
  22,381,130
  22,382,322
  22,387,380
  22,387,495
  22,388,337
  22,390,866
  22,391,534
  22,393,505
  22,396,120
  22,396,205
  22,397,382
  22,398,211
  22,398,613
  22,398,626
  22,398,924
  22,400,172
  22,400,360
  22,400,987
  22,401,722
  22,402,327
  22,402,713
  22,403,075
  22,403,820
  22,404,020
  22,404,500
  22,405,170
  22,408,261
  22,408,309
  22,408,351
  22,408,352
  22,410,118
  22,410,143
  22,410,681
  22,411,064
  22,412,145
  22,412,928
  22,413,187
  22,413,289
  22,413,972
  22,414,950
  22,414,956
  22,415,010
  22,415,036
  22,415,311
  22,415,986
  22,416,009
  22,416,014
  22,416,879
  22,417,004
  22,417,028
  22,418,111
  22,418,400
  22,418,761
  22,419,095
  22,419,372
  22,419,731
  22,420,325
  22,421,372
  22,421,471
  22,421,833
  22,423,852
  22,424,535
  22,426,034
  22,426,592
  22,426,878
  22,427,092
  22,428,021
  22,428,044
  22,428,891
  22,429,439
  22,430,627
  22,430,630
  22,431,911
  22,432,444
  22,434,026
  22,434,129
  22,434,224
  22,434,706
  22,436,166
  22,436,856
  22,436,857
  22,436,971
  22,437,317
  22,438,339
  22,439,868
  22,440,246
  22,440,524
  22,440,728
  22,441,339
  22,442,928
  22,443,322
  22,445,046
  22,445,077
  22,445,100
  22,446,123
  22,446,469
  22,446,534
  22,447,401
  22,449,103
  22,450,513
  22,454,927
  22,455,676
  22,456,773
  22,460,428
  22,462,442
  22,462,645
  22,462,741
  22,463,332
  22,463,416
  22,464,323
  22,465,207
  22,465,364
  22,465,530
  22,465,641
  22,468,224
  22,468,466
  22,468,477
  22,468,479
  22,468,558
  22,468,890
  22,472,850
  22,472,859
  22,472,874
  22,472,885
  22,472,891
  22,472,936
  22,472,942
  22,472,949
  22,472,958
  22,472,972
  22,472,981
  22,472,983
  22,473,004
  22,473,018
  22,473,041
  22,473,051
  22,473,063
  22,473,074
  22,473,086
  22,477,761
  22,478,099
  22,478,246
  22,478,317
  22,478,450
  22,478,550
  22,479,025
  22,479,039
  22,481,760
  22,482,951
  22,483,869
  22,484,259
  22,486,087
  22,487,227
  22,487,811
  22,488,427
  22,488,605
  22,488,806
  22,488,937
  22,488,988
  22,488,989
  22,489,153
  22,489,216
  22,490,721
  22,490,797
  22,491,107
  22,491,346
  22,491,931
  22,492,011
  22,493,042
  22,493,153
  22,493,949
  22,494,035
  22,494,246
  22,494,520
  22,494,639
  22,495,655
  22,497,697
  22,498,241
  22,498,367
  22,499,132
  22,499,245
  22,499,570
  22,500,797
  22,500,827
  22,501,983
  22,502,133
  22,502,215
  22,502,578
  22,502,639
  22,502,684
  22,503,139
  22,503,148
  22,503,760
  22,503,891
  22,506,790
  22,506,935
  22,508,856
  22,509,869
  22,509,940
  22,511,197
  22,513,710
  22,513,942
  22,514,318
  22,514,713
  22,514,738
  22,515,409
  22,515,653
  22,516,252
  22,516,975
  22,517,818
  22,517,958
  22,517,962
  22,517,966
  22,518,052
  22,518,230
  22,519,143
  22,519,717
  22,519,859
  22,519,860
  22,519,956
  22,519,969
  22,524,235
  22,524,382
  22,525,117
  22,525,584
  22,525,975
  22,526,741
  22,527,306
  22,529,707
  22,529,890
  22,530,435
  22,530,573
  22,530,774
  22,531,194
  22,531,373
  22,532,241
  22,533,887
  22,534,275
  22,534,969
  22,535,258
  22,535,320
  22,536,708
  22,536,780
  22,536,903
  22,537,421
  22,540,247
  22,540,456
  22,540,782
  22,540,975
  22,541,017
  22,541,031
  22,543,230
  22,543,408
  22,543,486
  22,543,654
  22,544,976
  22,544,982
  22,545,162
  22,545,448
  22,547,145
  22,547,222
  22,548,214
  22,548,501
  22,550,303
  22,551,524
  22,552,403
  22,552,915
  22,553,649
  22,554,517
  22,554,768
  22,554,958
  22,555,110
  22,555,512
  22,556,401
  22,556,602
  22,557,515
  22,557,560
  22,558,509
  22,558,621
  22,559,050
  22,560,029
  22,560,375
  22,561,018
  22,561,094
A
G
T
C
C
A
G
A
C
C
T
G
T
C
C
C
T
T
C
G
C
A
A
C
T
T
C
T
A/G
G/A
A
G
T
A
C
C
T
A
C
G
G
G
G
A
C
C
T
T
A
G
G
G
G
C
G
A
G
C
G
C
C
G
T
A
C
A
G
G
T
T
T
T
G
T
A
A
C
T
T
A
A
C
A
C
A
C
G
T
T
G
G
T
C
T
G
T
A
A
G
G
A
T
G
C
C
T
G
T
C
T
G
A
T
T
T
T
C
G
A
G
T
T
A/G
G/C
A/T
G/A
T/A
G/T
C/T
T/C
T/C
A/T
C/G
A/C
A/T
C/T
T/C
C/T
T/A
T
T
C
A
T
A
T
C
T
G
T
G
G
A
C
C
G
C
T
C
G
C
T
T
G
G
C
C
A
A
T
C
T
G
A
A
A
T
A
C
A
A
C
T
G
A
G
T
T
T
G
T/A
G/A
T/A
G/A
T
A
T
T
T
C
C
C
G
G
T
G
G
G
C
A
C
C
T
T
T
A
C
G
G
T
G
A
C
T
A
A
A/G
A
G
C
G
G
A
G
T
T
A
T
T
G
G
T
T
A
T
G
C
T
G
G
A
A
C
A
G
T
A
C
A
G
A
C
G
C
C
T
C
G
A
T
C
T
G
A
A
A
G
G
G
T
C
C
T
T
G
G