Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 4,696 (bp)   Positions: 156
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
DA/BklArbNsi (KNAW) 
.004
.296
.007
--
.144
.368
.015
.001
--
.003
--
--
--
.011
.182
.183
.001
.001
.0
.313
.054
.002
.022
.006
.174
--
.055
.061
.036
.005
.001
.002
.0
.0
.0
.001
.027
.227
.191
.002
.102
.128
.053
.114
.002
--
--
--
--
--
.005
.091
.011
.011
.045
.003
.004
--
--
.008
.001
.256
.046
.117
.003
.036
.015
.043
.001
.001
.002
.0
.972
.002
.07
.106
.016
--
--
--
--
--
--
--
--
.065
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.001
.001
.001
--
.315
.02
.002
.005
.009
.025
.021
.007
.011
.005
--
--
--
.003
.005
.001
.002
.017
.001
.001
.017
.017
.072
.054
.0
.001
.001
.0
.004
.028
.061
.066
--
--
--
--
--
--
--
.021
.012
.123
--
.019
.054
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
A
C
T
A
A
G
T
T
G
2
C
A
G
C
A
C
G
C
A
G
G
9
A
G
G
A
C
C
A
G
G
A
56
A
T
G
G
4
C
T
T
C
4
C
T
A
G
2
C
T
A
8
G
A
A
A
4
2
G
C
40
T
C
A
C
T
G
G
T
G
T
C
T
8
C
C
T
A
T
T
A
A
T
G
T
G
G
C
G
G
T
A
C
C
C
C
A
A
T
A
3
A
G
T
C
G
A
C
G
A
C
T
G
T
T
G
C
G
C
T
A
A
C
T
C
C
T
C
A
T
G
G
T
T
T
T
G
A
T
G
11
6
4
A
2
2
C
G
C
C
T
G
T
G
C
  41,252,284
  41,252,727
  41,253,831
  41,254,147
  41,254,683
  41,254,795
  41,255,440
  41,256,553
  41,256,990
  41,258,747
  41,259,442
  41,259,472
  41,259,478
  41,260,174
  41,260,346
  41,260,347
  41,260,589
  41,260,731
  41,260,903
  41,261,027
  41,261,341
  41,261,892
  41,262,029
  41,262,084
  41,262,212
  41,262,663
  41,262,760
  41,262,892
  41,262,898
  41,262,996
  41,263,078
  41,263,366
  41,263,532
  41,263,744
  41,263,993
  41,264,022
  41,264,207
  41,264,261
  41,264,264
  41,264,457
  41,264,587
  41,264,589
  41,264,630
  41,264,669
  41,264,688
  41,264,838
  41,264,885
  41,264,909
  41,264,983
  41,265,053
  41,265,351
  41,265,518
  41,265,528
  41,265,597
  41,265,718
  41,265,780
  41,265,882
  41,266,327
  41,266,329
  41,266,429
  41,266,435
  41,266,570
  41,266,720
  41,266,824
  41,266,863
  41,267,004
  41,267,015
  41,267,147
  41,267,953
  41,268,277
  41,268,323
  41,268,681
  41,268,746
  41,269,095
  41,269,571
  41,269,758
  41,269,867
  41,269,911
  41,270,037
  41,270,157
  41,270,165
  41,270,210
  41,270,239
  41,270,248
  41,270,249
  41,271,118
  41,271,688
  41,272,136
  41,272,573
  41,272,583
  41,272,742
  41,272,949
  41,273,500
  41,274,615
  41,274,617
  41,274,622
  41,275,060
  41,275,097
  41,275,099
  41,275,361
  41,275,467
  41,275,542
  41,275,566
  41,275,625
  41,275,704
  41,275,782
  41,276,018
  41,276,123
  41,276,215
  41,276,306
  41,276,979
  41,277,122
  41,277,362
  41,277,748
  41,277,808
  41,278,277
  41,278,377
  41,278,876
  41,279,154
  41,279,160
  41,279,169
  41,279,243
  41,279,248
  41,279,270
  41,279,659
  41,279,661
  41,279,666
  41,279,667
  41,279,677
  41,279,687
  41,279,690
  41,279,712
  41,279,715
  41,279,827
  41,279,828
  41,279,962
  41,279,979
  41,280,319
  41,280,519
  41,280,545
  41,280,628
  41,280,656
  41,280,850
  41,281,152
  41,281,181
  41,281,345
  41,281,348
  41,281,357
  41,282,192
  41,282,464
  41,282,698
  41,282,875
  41,283,053
  41,283,879
  41,284,465
  41,284,782
A
A/5
13
T/-
G
-
C
C
C
A
-
G
G
C
C/6
A/-
T
A
T
C
G/54
A
-
G
C
C
G
T
T
G
A
C
C
-
G
G
A
-
-
T
-
-
A
-
13
C
2
7
-
15
C
G
-
T
G
T
G
-
2/-
T
G
-
4
T
C
4
C
T
A
C
A
C
T
C
-
G
C/7
C
-
C
2
C
C
C
A
C
A
C
2
A
4
C
G
A
G
A
T
2
14
2
G
-
C
2
C
T
T
G
17
T
A/17
T
C
A
C
C
A
A
T
T
C
10
27
2
G
G
A
A
A
C
A
A
A
5
6
C
2
A
G
G
A
-
-
-
G
-
-
T
T
CA/3
T
C
A
C
A
T