Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 56,328 (bp)   Positions: 269
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.051
.001
.02
.017
.045
.571
.646
--
--
--
.008
.571
.052
.002
.007
.054
.003
--
--
.874
--
.046
--
.206
.078
.001
.708
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.0
.039
--
.015
.086
--
--
.004
.078
.029
.313
.0
.0
.016
--
--
--
.232
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.038
.001
.016
.03
.005
.015
.01
.014
.014
.033
.01
.008
.001
.015
.121
.033
.002
.0
.02
.133
.354
.062
.036
.001
.002
.003
.001
.054
.018
.027
.028
.052
.104
.028
.63
.957
.543
.015
.002
.007
.09
.001
.0
.001
.994
.018
.011
.036
.005
.2
.203
.158
.031
.065
.212
.005
.012
.031
.114
.016
.002
.853
.002
.002
.002
.018
.003
.025
.136
.013
.002
.048
.09
--
--
--
--
--
--
--
.011
.01
.581
.105
.282
.0
.005
.034
--
--
.031
.002
.043
.003
.001
.0
.982
.586
.597
.038
.032
.129
.0
.002
.007
.002
.009
.007
--
--
--
.041
.354
.038
.064
.008
.066
.619
.672
.021
.011
.028
.003
.008
.001
.007
.001
.011
.015
.017
.002
.006
.014
.027
.067
.011
.0
.001
.0
.15
.027
.001
.006
.022
.872
.683
.045
.013
.005
.393
.002
.015
.009
.004
.028
.016
.003
.028
.346
.134
.03
.02
.073
.079
.058
.01
.013
--
--
--
--
--
--
.028
.001
.002
.0
.007
.009
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
Orc3
G
C
9
A
T
A
G
T
T
T
T
5
7
G
A
8
A
C
G
C
G
G
C
20
C
T
C
8
G
G
C
A
G
C
3
2
T
A
T
G
A
A
A
G
G
C
T
T
G
A
C
G
G
A
C
G
A
A
C
A
C
A
C
C
T
2
G
A
G
C
7
A
A
C
T
C
G
A
G
A
T
T
T
T
A
C
C
3
A
C
G
C
A
A
C
A
G
G
G
A
A
A
A
C
30
G
G
C
A
C
G
A
A
A
G
T
T
G
G
A
A
4
C
G
G
G
A
A
A
T
C
C
G
C
A
T
C
A
G
17
A
T
G
G
C
G
A
G
G
G
G
G
G
C
G
C
G
C
T
T
C
A
T
C
G
T
T
C
A
T
C
C
G
A
2
T
A
G
2
A
C
T
A
C
G
A
T
T
T
C
G
T
A
T
T
2
A
C
G
A
G
T
T
C
G
T
A
T
C
T
T
A
A
T
C
C
T
A
T
A
C
C
C
C
C
A
T
A
G
G
G
C
T
A
T
T
A
A
A
C
A
C
G
C
A
T
A
G
2
A
A
C
T
C
A
2
A
T
A
T
C
A
G
T
C
G
8
T
C
  54,589,868
  54,591,886
  54,592,173
  54,592,639
  54,593,077
  54,593,347
  54,593,405
  54,594,822
  54,594,843
  54,595,277
  54,596,021
  54,596,161
  54,597,377
  54,597,450
  54,598,196
  54,599,554
  54,599,672
  54,601,390
  54,601,638
  54,602,195
  54,602,309
  54,602,758
  54,603,758
  54,605,411
  54,605,725
  54,608,116
  54,608,686
  54,610,219
  54,611,902
  54,611,946
  54,611,947
  54,612,257
  54,612,352
  54,612,392
  54,612,592
  54,612,593
  54,612,836
  54,612,886
  54,612,956
  54,613,176
  54,613,183
  54,613,273
  54,613,288
  54,613,336
  54,613,405
  54,613,521
  54,613,528
  54,613,725
  54,614,101
  54,614,302
  54,614,351
  54,614,353
  54,614,475
  54,615,178
  54,615,297
  54,615,613
  54,615,676
  54,615,738
  54,616,377
  54,616,789
  54,617,170
  54,617,361
  54,617,501
  54,617,693
  54,617,733
  54,618,042
  54,618,474
  54,618,475
  54,619,050
  54,619,253
  54,619,269
  54,619,310
  54,619,594
  54,620,315
  54,620,432
  54,620,536
  54,620,691
  54,620,826
  54,620,977
  54,621,130
  54,621,312
  54,621,337
  54,621,338
  54,621,361
  54,621,391
  54,621,481
  54,621,893
  54,621,943
  54,621,995
  54,622,022
  54,622,181
  54,622,532
  54,622,901
  54,623,009
  54,623,038
  54,623,041
  54,623,156
  54,623,188
  54,623,191
  54,623,260
  54,623,329
  54,623,330
  54,624,055
  54,624,164
  54,624,270
  54,624,325
  54,624,343
  54,624,905
  54,624,976
  54,625,072
  54,625,151
  54,625,656
  54,625,960
  54,625,972
  54,626,521
  54,626,708
  54,626,800
  54,626,916
  54,627,169
  54,627,172
  54,627,174
  54,627,178
  54,627,211
  54,627,437
  54,627,822
  54,627,997
  54,628,182
  54,628,254
  54,628,404
  54,628,668
  54,629,211
  54,629,747
  54,629,767
  54,629,783
  54,629,943
  54,630,092
  54,630,093
  54,630,243
  54,630,308
  54,630,586
  54,630,845
  54,630,958
  54,631,149
  54,631,354
  54,631,520
  54,631,734
  54,631,915
  54,632,567
  54,634,137
  54,634,361
  54,634,463
  54,634,956
  54,635,088
  54,635,101
  54,635,171
  54,635,189
  54,635,230
  54,635,303
  54,635,332
  54,635,384
  54,635,484
  54,635,574
  54,635,759
  54,635,829
  54,635,842
  54,635,855
  54,635,871
  54,635,911
  54,635,980
  54,635,982
  54,636,030
  54,636,031
  54,636,088
  54,636,095
  54,636,108
  54,636,168
  54,636,279
  54,636,286
  54,636,620
  54,636,700
  54,636,850
  54,637,022
  54,637,056
  54,637,143
  54,637,271
  54,637,433
  54,637,664
  54,637,862
  54,637,878
  54,637,905
  54,637,950
  54,638,002
  54,638,047
  54,638,061
  54,638,074
  54,638,122
  54,638,125
  54,638,224
  54,638,349
  54,638,428
  54,638,441
  54,638,465
  54,638,491
  54,638,631
  54,638,684
  54,638,734
  54,638,764
  54,638,911
  54,638,946
  54,639,214
  54,639,328
  54,639,334
  54,639,476
  54,639,536
  54,639,949
  54,640,058
  54,640,138
  54,640,193
  54,640,211
  54,640,223
  54,640,289
  54,640,300
  54,640,302
  54,640,306
  54,640,403
  54,640,436
  54,640,457
  54,640,581
  54,640,587
  54,640,746
  54,640,955
  54,640,964
  54,641,006
  54,641,009
  54,641,032
  54,641,107
  54,641,208
  54,641,362
  54,641,366
  54,641,423
  54,641,453
  54,641,719
  54,641,839
  54,641,942
  54,642,114
  54,642,119
  54,642,398
  54,642,554
  54,642,677
  54,642,750
  54,642,769
  54,642,772
  54,642,975
  54,642,977
  54,642,991
  54,643,325
  54,643,326
  54,643,539
  54,643,596
  54,643,636
  54,643,681
  54,643,690
  54,643,691
  54,643,734
  54,643,755
  54,643,780
  54,643,792
  54,644,070
  54,644,345
A
T
-
5/3
G
G
C
T/2
3
2
C
-
-
3
G
-
G
CA/3
G/-
T
T
A
T
-
A
C
2
-
8
T
G
C
C
T
3/-
-
C
T
C
A
C
T
G
A
T
T
2
9
T
T
T
A
A
C
T
C
G
G
T
C
3/5
G
15
G
C
-
C
G
A
T
-
T
2
T
G
T
-
G
A
-
C
C
G
C
-
T
A
-
G
T
A
T
G
C
G
G
A
A
A
G
2
5
G
A
-
C
T
T
G
T
A
G
-
G
A
A
C
T
22
-
2
-
6
A
A
2
G
G
C
C
T
T
A
T
G
G
A
4
A
-
-
C
C
A
A
T
G
A
A
A
A
A
A
A
A
T
-
T
G
C
T
-
C
T
C
A
C
T
C
G
T
T
A
G
-
A
2
2
-
A/58
G
C
C
A
2
G
T/2
C
C
T
T
C
G
G
C
-
G
T
-
G
A
2
C
T
A
C
G
G
T
C
2
G
T
C
T
G
C
G
4
4
9
T
T
T
T
2
C
3
C
A
A
T
A
G
C
C
G
C
G
A
G
T
A
T
G
C
T
A
-
6
G
G
-
A
T
-
A/-
T/-
G
G
A
-
C
C
T
A
-
4
T