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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 229,965 (bp)   Positions: 601
Conservation 
Genes ( + ) 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
F344/NCrl (KNAW) 
.005
.003
.005
.011
.025
.021
.071
.002
.501
.501
.503
.532
.545
.001
.263
.01
.084
.013
.033
.046
.001
.003
.053
.024
.001
.184
--
--
--
.0
.0
.001
--
--
--
--
--
--
.954
.0
.001
--
.003
.0
.024
.127
.153
.013
.01
.005
.056
.006
.003
.002
.001
.001
.001
.001
.032
.0
.007
.327
.0
--
.001
.009
.003
.001
.027
.228
.254
.005
.041
--
.003
.007
.091
.047
.0
.07
.0
.001
.995
.0
.0
.004
.0
.0
.002
.001
.001
.0
.004
1.0
.133
.001
.781
.001
.009
.005
.046
.001
.06
.21
.0
.0
.008
.01
.036
.053
.09
.154
.142
.016
.003
.005
.001
.4
.053
.833
.883
.846
.0
.059
.018
.008
.0
.0
.001
.002
.006
.004
.001
.001
.0
.002
.004
.066
.011
.019
.003
.017
.009
.028
.019
.271
.053
.0
.002
.011
.102
.006
.006
.04
.069
.001
.034
.037
.017
.065
.935
.005
.002
.004
.0
--
--
.0
.0
.057
.011
.008
.036
.001
.0
.0
--
.102
--
--
.985
.791
.006
.016
.033
.101
.004
.026
.001
.011
.025
.163
.28
.38
.034
.019
.03
.164
.163
.16
.065
.102
.341
.026
.036
.014
.074
.003
.007
.002
.016
.005
.013
.0
.0
.001
.007
.087
.799
.654
.002
.002
.0
.001
.025
.023
.008
.054
.053
.077
.062
.094
.028
.026
.021
.094
.368
.013
.003
.013
.036
.062
.074
.071
.01
.004
.292
.314
--
--
--
--
--
.348
.008
.211
.002
.005
.033
.001
.232
.422
.0
.002
.0
.0
.004
.0
.001
.014
.006
.002
.0
.359
.079
.003
.0
.0
.004
.004
.051
.144
.033
.023
.037
.006
.001
.022
.079
.106
.074
.57
.273
.085
.148
.038
.032
.102
.454
.374
.045
.044
.032
.692
.471
.562
.38
.193
.069
.096
.13
.007
.81
.802
.055
.055
.001
.002
.008
.246
.193
.169
.156
.147
.026
.001
.036
.01
.003
.112
.061
.039
.004
.006
--
--
--
.001
.0
.015
.003
.001
.019
.251
.075
.144
.084
.772
.003
.0
.002
.001
.01
.003
--
--
--
--
--
--
--
--
--
.034
.056
.021
.001
.026
.977
.863
.997
.996
.001
.249
.011
.009
.006
.003
.001
.001
.0
.0
.0
.597
.646
.001
.002
.015
.032
.027
.002
.002
.023
.014
--
--
--
--
.436
.003
.006
.535
.001
.001
.011
.036
.006
.085
.001
.004
.002
.015
--
--
--
--
--
.007
--
.009
.0
.04
.001
.011
.006
.062
.534
.0
.004
.003
.02
.001
.001
.357
.0
.001
.0
.0
.005
.001
.001
.0
.0
.0
.033
.057
.003
.101
.265
.825
.829
.558
.027
.027
.001
.004
.001
.079
.017
.02
.003
.018
--
.008
.011
.001
.009
.0
.0
.015
.004
.001
.003
.082
.185
.071
.005
.0
.0
.008
.035
.066
.0
--
.217
--
--
.008
.497
.005
.005
.057
--
.019
.041
.001
--
--
--
--
.982
.97
.968
.984
1.0
.998
--
--
.98
.807
.002
.011
.196
.005
.994
--
--
.247
.299
--
.002
.005
.502
--
--
--
--
--
.001
.349
.006
.0
.0
.0
.0
.002
.684
.153
.0
.0
.012
.03
.079
--
--
--
--
--
--
--
--
.011
.015
.016
.14
.274
.005
.0
--
.993
.994
.341
.345
.547
.03
.006
.001
.004
.022
.015
.569
.299
.025
.029
.001
.015
.001
.311
.888
.662
.004
.24
.021
.056
.035
.059
.24
.107
.042
.0
.488
--
.223
.012
.002
.01
.009
.003
.001
.002
.119
Oprm1
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Ipcef1
Ipcef1
Ipcef1
Ipcef1
Ipcef1
Ipcef1
Ipcef1
Ipcef1
Ipcef1
Ipcef1
Ipcef1
Ipcef1
Ipcef1
Ipcef1
Ipcef1
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--
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--
T
A
A
C
A
A
G
C
C
C
A
C
5
T
T
T
T
4
G
C
T
16
C
T
A
8
G
A
A
G
G
T
A
C
T
G
2
T
4
C
T
C
G
G
4
A
G
C
C
G
T
18
2
18
G
G
G
C
C
A
T
2
2
14
T
G
G
G
T
8
6
C
24
8
C
8
A
2
A
C
A
C
G
C
G
G
C
T
T
C
T
C
G
G
A
T
A
G
C
A
C
A
T
G
G
A
A
C
G
A
C
G
3
C
A
A
C
4
G
3
G
T
G
2
A
5
C
G
G
G
C
14
A
T
6
C
C
A
T
T
G
C
A
A
C
T
T
G
10
A
A
G
G
C
2
G
G
T
8
T
A
A
10
G
A
A
G
C
T
C
A
78
C
C
A
4
G
A
A
C
G
T
C
A
3
C
T
G
A
G
T
T
10
G
G
T
T
A
T
G
G
2
A
T
T
C
T
A
T
T
G
A
C
G
G
A
C
A
T
C
G
T
G
T
C
A
A
A
A
A
T
C
T
C
A
A
T
A
G
T
C
G
G
G
T
C
G
T
A
A
G
G
T
A
A
G
G
G
G
A
20
T
A
A
T
G
A
C
C
A
T
T
G
T
A
G
C
G
C
A
G
T
A
T
A
A
T
C
C
A
A
A
C
G
T
G
G
A
C
C
T
A
A
A
G
C
G
4
T
C
C
C
T
T
T
T
4
C
A
G
C
G
T
T
G
C
T
7
C
4
8
4
C
A
G
4
A
8
C
8
A
T
A
A
C
T
A
A
C
C
A
A
G
T
T
G
G
C
G
C
A
A
14
A
G
T
C
A
G
T
C
T
G
T
T
G
2
A
T
A
C
G
4
14
12
C
C
G
T
T
A
A
T
C
A
G
G
A
C
A
C
C
C
T
T
C
T
A
C
C
A
T
G
G
A
A
G
G
T
C
52
G
T
G
A
G
2
G
C
T
A
G
T
A
C
C
A
A
A
A
C
C
G
G
G
C
C
A
T
3
2
A
C
T
C
G
A
T
G
A
G
A
G
C
A
A
4
A
A
10
10
T
A
C
T
A
G
G
A
C
A
A
A
G
T
4
2
T
G
G
C
C
A
T
9
G
C
C
G
2
G
C
T
A
C
T
G
2
G
G
T
2
C
T
C
G
4
C
T
A
G
A
G
T
C
C
A
G
T
A
C
G
A
A
2
C
T
G
2
A
A
C
A
A
C
G
G
G
2
G
A
4
T
C
T
T
A
C
G
C
T
C
T
G
A
5
A
C
C
A
8
6
T
T
C
A
G
A
C
T
A
G
A
130
G
T
C
T
A
T
T
T
C
C
G
A
T
G
G
G
T
  44,804,228
  44,804,229
  44,805,229
  44,805,270
  44,805,433
  44,806,331
  44,806,694
  44,806,870
  44,806,950
  44,806,968
  44,806,969
  44,806,979
  44,806,982
  44,807,172
  44,808,402
  44,808,430
  44,808,484
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  44,815,535
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  44,816,719
  44,816,916
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  44,817,873
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  44,818,477
  44,818,581
  44,819,647
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  44,827,398
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  44,838,943
  44,839,129
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  44,839,279
  44,839,455
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  44,841,372
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  44,842,863
  44,843,156
  44,843,204
  44,843,328
  44,843,764
  44,843,768
  44,843,775
  44,843,816
  44,843,915
  44,843,921
  44,844,148
  44,844,205
  44,844,226
  44,844,229
  44,844,244
  44,844,273
  44,844,489
  44,844,513
  44,844,593
  44,844,631
  44,844,727
  44,845,644
  44,845,745
  44,845,799
  44,845,818
  44,845,874
  44,845,891
  44,845,962
  44,846,025
  44,846,045
  44,846,077
  44,846,585
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  44,847,241
  44,847,548
  44,848,004
  44,851,736
  44,851,975
  44,852,155
  44,852,275
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  44,855,405
  44,859,520
  44,859,710
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  44,861,238
  44,862,238
  44,866,025
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  44,867,095
  44,868,997
  44,869,861
  44,869,993
  44,870,797
  44,871,060
  44,871,062
  44,871,194
  44,871,219
  44,871,220
  44,871,230
  44,872,065
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  44,876,082
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  44,878,193
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  44,878,783
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  44,879,815
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  44,881,926
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  44,883,735
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  44,883,935
  44,884,655
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  44,885,032
  44,885,035
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  44,886,774
  44,886,851
  44,886,852
  44,887,040
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  44,887,052
  44,887,128
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  44,889,264
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  44,889,614
  44,889,728
  44,889,739
  44,889,744
  44,889,781
  44,889,931
  44,890,310
  44,890,344
  44,890,398
  44,890,526
  44,890,666
  44,891,005
  44,891,476
  44,891,624
  44,891,811
  44,892,317
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  44,893,411
  44,893,413
  44,893,594
  44,893,981
  44,894,015
  44,894,024
  44,894,083
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  44,894,892
  44,895,291
  44,896,058
  44,896,102
  44,896,126
  44,896,776
  44,896,892
  44,897,095
  44,897,230
  44,897,526
  44,897,591
  44,898,068
  44,898,091
  44,898,119
  44,898,338
  44,898,359
  44,898,401
  44,898,434
  44,898,782
  44,899,085
  44,899,107
  44,899,174
  44,899,341
  44,899,342
  44,899,348
  44,899,393
  44,899,575
  44,899,610
  44,899,661
  44,899,751
  44,899,842
  44,899,859
  44,900,028
  44,900,049
  44,900,067
  44,900,171
  44,900,491
  44,900,519
  44,900,674
  44,900,894
  44,900,895
  44,901,059
  44,902,020
  44,902,962
  44,903,024
  44,903,760
  44,904,254
  44,904,373
  44,904,375
  44,904,377
  44,904,378
  44,905,978
  44,906,065
  44,906,933
  44,906,946
  44,907,178
  44,907,650
  44,907,737
  44,907,741
  44,907,774
  44,908,298
  44,908,490
  44,908,491
  44,908,521
  44,909,092
  44,909,578
  44,910,546
  44,910,607
  44,911,397
  44,911,967
  44,912,143
  44,912,176
  44,912,775
  44,913,273
  44,913,576
  44,913,728
  44,913,733
  44,913,900
  44,914,177
  44,914,204
  44,915,366
  44,915,663
  44,915,694
  44,915,697
  44,915,740
  44,915,799
  44,915,836
  44,915,837
  44,915,841
  44,915,845
  44,917,219
  44,917,493
  44,917,771
  44,919,441
  44,919,940
  44,920,201
  44,920,541
  44,920,601
  44,920,605
  44,920,909
  44,921,686
  44,921,965
  44,922,537
  44,922,571
  44,922,790
  44,926,624
  44,926,847
  44,926,898
  44,927,883
  44,927,885
  44,928,623
  44,928,625
  44,929,168
  44,929,562
  44,929,596
  44,929,732
  44,929,859
  44,931,311
  44,933,297
  44,933,500
  44,933,510
  44,934,011
  44,934,249
  44,934,265
  44,934,411
  44,934,982
  44,935,724
  44,936,593
  44,936,692
  44,936,732
  44,936,775
  44,937,562
  44,937,771
  44,938,444
  44,938,626
  44,939,189
  44,939,479
  44,939,927
  44,940,389
  44,941,069
  44,941,112
  44,941,115
  44,941,146
  44,941,155
  44,941,655
  44,941,903
  44,943,110
  44,943,881
  44,944,216
  44,944,272
  44,944,520
  44,944,633
  44,944,685
  44,945,154
  44,945,340
  44,945,654
  44,945,708
  44,945,888
  44,946,041
  44,946,482
  44,946,723
  44,947,055
  44,947,077
  44,947,463
  44,947,598
  44,947,615
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  44,948,014
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  44,951,355
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  45,033,410
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2
T
C
T
2
G
A
T
G
T
G
A
-
C
-
C
C
-
2
G
3
-
9
G
G
-
13/9
G
12
A
A
C
A/-
C/-
T/12
G/38
-
A
-
T
C
2
A
C
-
2
12
T
A
A
-
18/-
2/-
18/-
-
A
A
A
-
G
2
-
-
-
C
A
A
A
A
8/-
6/-
15
-
-
A
-
G
-
G
-
T
G
A
T
A
-
-
C
C
A
A
A
12
T
G
G
G
A
T
-
3
G
-
C
C
T
C
10
3
8
2
G/10
3/-
A
G
11
G
-
A
3/-
G/29
T/17
A
2/-
G
-
G
A
A
A
T
-
G
C
-
T
T
C
C
C
A
G
G
G
T
9
C
C
-
G
G
A
7
2
2/-
4
A
-
-
C
2
-
-
A
C
-
T
2
C
T
-
-
A
T
G
-
A
7/5
G
A
-
G
T
T
-
T
A
A
G
T
A
G
-
T
A
C
C
G
C
A
2
-
G
C
A
T
C
T
C
C
A
G
T
C
A
T
T
AT/3
C
T
A
G
A
C
T
G
G
G
G
G
C
T
A
G
T
G
A
G
A
C
T
A
A
T
A
T
A
C
G
G
T
C
C
G
G
A
A
A
A
T
20/-
A
G
G
C
A
G
A
T
G
C
T/4
A
C
5
A
T
A
T
-
A
C
G
G
G
C
G
A
5
5
45
G
T
C
C
2
C
C
T
T
C
G
7
G
C
T
A
-
C
T
7
T
2
18
C
-
-
T
C
11
4
5
2
7
A
T
G
-
A
-
8/-
-
G
G
G/2
-
-
-
4
-
G
C
2
15/11
C/G
C
4
G
2
2
G
G
A
G
C
20
16
T
A
6
2
T
-
G
T
C
T
G
A
C
T
A
A
-
C
3/5
-
5
G
C
T
-
-
14/-
12/-
G
T
A
C
C
G
G
G
A
C
A
A
2
T
9
T
-
T
C
C
T
A
G
T
-
G
C
A
A
G
G
-
A
C
A
-
C
C
A
G
A
-
G/13
T
C
G
A
C
T
T
T
G
G
G
C
T
4
A
T
A
T
T
C
5
3/-
-
-
A
C
G
A
G
C
A
G
A
T
C
A
-
G
4/-
G
G
-
-
C
-
T
C
5/7
A
A
G
T
2
G
G
A
G
4/-
-
C
A
A
T
T
G
10
-
9
T
T
A
-
-
T
-
-
T
C
A
2/-
2
C
C
-
C/2
2
2
6
-
-
2
-
A
-
-
C
2
-
G
A
C
G
T
A
G
C
-
T
G
A
2/-
-
G
T
T
3
T
T
C
A
-
A
14
-
C
T
C
C
G
T
A
T
G
T
-
A
T
-
G
A
G
T
8/-
6/-
5/7
C
A
C
A/C
T
T
A
G
A
G
-
A
C
T
2
G
C
C
C
G
T
A
T
C
A
2
A
A