Variant Visualizer (Variants)

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Sequence Annotation

Assembly RGSC_v3.4

Conservation

Genes ( + )

Genes ( - )

Rnor 5.0

LE/Stm (Illumina) (KNAW)

1.0	.031	.0	.0	.571	.234	.911	.977	.077	.003	.039	.001	.166	.032	.004	.148	.015	.0	.0	.007	.0	.135	.0	.007	.0	.009	.015	.195	.031	.005	.006	--	--	--	--	.002	.001	.0	.0	.001	.001	.004	.007	.024	--	.124	.221	.001	.001	.0	.008	.075	.0	.265	.007	.411	.071	.193	.003	.035	.025	.0	.029	.019	.001	.782	.001	.0	.953	.019	.039	.033	--	--	.006	.014	--	.006	.996	.0	.001	.002	.023	1.0	.962	.715	.76	.013	.032	.002	.013	.001	.001	.502	--	.009	.001	.0	.828	.997	.004	.993	.005	.023	.015	.008	.001	.001	.001	.002	.207	.056	.332	.131	.129	.007	.107	.002	.004	.0	.0	.005	.048	.003	.023	.018	.004	--	--	.025	.017	.855	.024	.006	--	.001	.004	--	--	.228	.001	.003	.003	--	--	--	.0	.131	.004	.0	.003	.003	.0	.021	--	.018	.061	.423	.067	.006	.043	.093	1.0	.0	.0	.059	.0	.083	.492	--	.731	1.0	.069	.0	.001	--	--	--	.006	.004	--	.001	.003	.997	.334	.0	.0	.001	.004	.002	--	.028	.031	.006	.042	.0	.006	.003	.007	.003	.085	.047	.003	.031	.057	.614	.003	.001	.021	.332	.705	.001	.006	.003	.001	.0	.02	.002	.271	.005	.012	.002	.036	.03	.044	.876	.04	--	--	--	--	--	--	--	--	.018	.018	.001	.037	.001	.0	.0	.997	.894	.0	.488	.886	.108	.098	.123	.174	.003	.051	.163	.217	.006	.068	.004	.081	.038	.112	--	.001	.007	.006	.021	.008	.216	.0	.032	.177	.009	.005	.0	.039	.0	.054	.007	.004	.207	.001	.002	--	--	--	--	--	--	--	--	.002	.092	.0	.031	.173	.001	.03	.033	.019	.0	.998	.118	.026	.174	.062	.148	.636	.0	.0	.002	.001	.001	.003	.922	.992	.013	.004	.002	.025	.037	.004	.878	.282	.646	.013	.004	.387	.103	.0	.002	.0	.008	.998	.001	.733	.001	.013	.088	.002	.001	.001	.0	.004	.009	.031	.01	.001	.002	.091	.109	.075	.045	.013	.008	.0	.0	.012
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2										Nr5a2
G	T	C	A	C	A	T	C	T	C	C	G	T	G	G	C	4	T	A	A	A	T	G	G	T	C	T	A	A	3	2	T	C	C	2	C	C	C	C	C	T	T	G	T	G	C	G	G	C	A	A	A	G	C	C	A	G	G	T	8	4	A	C	G	C	T	C	C	C	A	2	T	C	20	T	G	2	C	A	G	G	A	G	A	T	2	C	G	G	T	G	A	T	A	G	C	G	T	G	T	C	T	T	T	A	A	C	T	G	T	T	2	C	4	3	C	2	A	G	A	G	C	G	A	G	A	G	T	G	C	4	G	C	G	C	G	A	T	G	G	C	G	T	G	G	2	A	G	C	T	T	G	T	A	32	T	T	A	4	A	G	3	C	4	2	G	T	T	T	6	T	A	A	C	G	2	T	C	T	T	A	G	G	G	25	T	C	G	T	T	G	T	A	G	C	C	A	T	C	G	G	A	C	G	G	T	A	T	G	A	G	A	5	T	T	A	A	11	C	G	A	G	4	2	T	G	G	G	G	A	G	G	4	G	12	C	C	C	C	T	C	C	T	A	G	G	C	C	A	A	2	T	A	T	A	G	4	G	C	T	G	C	T	A	G	G	G	A	T	G	C	A	4	G	2	A	C	T	A	A	A	G	A	A	G	8	A	C	G	2	T	T	G	A	T	G	3	A	T	A	G	A	C	A	T	C	C	G	T	G	C	C	G	G	A	C	G	A	C	C	C	G	T	A	G	T	C	T	C	A	C	C	G	C	T	C	A	A	C	C	T	G	2	C	T	2	C	T	3	T	T	A	A	G	C	G	A
58,791,715	58,791,765	58,791,870	58,792,121	58,792,332	58,792,360	58,792,784	58,793,211	58,793,661	58,795,293	58,795,399	58,795,466	58,795,995	58,796,054	58,796,066	58,796,405	58,796,437	58,796,666	58,796,847	58,796,902	58,797,073	58,797,359	58,797,829	58,798,070	58,799,062	58,799,238	58,799,830	58,799,947	58,800,488	58,800,557	58,800,558	58,801,041	58,801,120	58,801,168	58,801,221	58,801,321	58,801,326	58,801,331	58,801,336	58,801,341	58,802,034	58,802,441	58,803,935	58,804,805	58,805,230	58,806,042	58,806,569	58,806,725	58,808,443	58,808,720	58,809,603	58,810,970	58,812,568	58,812,749	58,813,542	58,814,293	58,814,699	58,815,137	58,817,096	58,817,273	58,817,525	58,820,226	58,821,169	58,823,405	58,823,667	58,824,021	58,824,548	58,824,888	58,825,112	58,826,151	58,826,643	58,826,644	58,827,058	58,827,450	58,827,922	58,828,690	58,829,851	58,829,876	58,832,656	58,833,224	58,833,698	58,833,965	58,834,452	58,834,796	58,834,881	58,835,014	58,835,015	58,835,834	58,836,016	58,836,244	58,836,531	58,836,608	58,836,696	58,837,159	58,837,506	58,837,791	58,837,944	58,838,936	58,839,262	58,839,675	58,840,337	58,840,810	58,841,843	58,842,190	58,842,295	58,842,725	58,843,203	58,843,738	58,843,913	58,844,535	58,844,703	58,845,545	58,845,627	58,846,106	58,846,107	58,846,248	58,846,544	58,846,572	58,846,653	58,846,968	58,846,969	58,847,048	58,847,747	58,847,848	58,848,026	58,848,081	58,848,138	58,848,800	58,849,038	58,849,478	58,849,516	58,849,610	58,849,762	58,849,940	58,850,301	58,851,002	58,851,831	58,852,732	58,852,734	58,853,128	58,853,744	58,854,087	58,854,423	58,855,126	58,855,171	58,855,172	58,855,356	58,856,511	58,857,151	58,857,156	58,857,234	58,857,236	58,857,238	58,857,612	58,858,258	58,858,483	58,858,607	58,858,853	58,858,979	58,859,890	58,859,959	58,859,985	58,860,713	58,861,466	58,861,468	58,861,645	58,863,215	58,863,698	58,863,975	58,864,640	58,865,992	58,866,317	58,866,538	58,866,852	58,866,966	58,867,477	58,867,687	58,867,763	58,867,835	58,868,208	58,868,804	58,868,829	58,868,843	58,869,787	58,870,071	58,870,106	58,871,710	58,871,711	58,871,728	58,871,816	58,872,136	58,872,389	58,872,390	58,872,619	58,872,769	58,872,789	58,873,040	58,873,249	58,873,347	58,873,637	58,873,665	58,873,678	58,873,724	58,873,928	58,873,939	58,874,098	58,874,366	58,874,469	58,874,643	58,874,876	58,875,141	58,875,597	58,875,739	58,875,745	58,876,022	58,876,577	58,876,989	58,877,271	58,877,447	58,877,760	58,877,950	58,878,005	58,878,137	58,878,139	58,878,443	58,878,843	58,879,064	58,879,318	58,879,412	58,879,424	58,879,428	58,879,438	58,879,440	58,879,447	58,879,511	58,880,102	58,880,291	58,880,484	58,880,866	58,881,042	58,881,356	58,881,357	58,881,444	58,881,483	58,881,788	58,882,635	58,882,705	58,883,039	58,883,051	58,883,054	58,883,058	58,883,116	58,883,161	58,883,563	58,883,577	58,883,859	58,884,420	58,884,663	58,884,677	58,884,695	58,884,835	58,884,877	58,885,317	58,885,374	58,885,583	58,885,615	58,885,626	58,886,042	58,886,155	58,886,168	58,886,253	58,886,560	58,886,742	58,886,781	58,887,146	58,887,163	58,887,187	58,887,416	58,887,431	58,887,642	58,888,217	58,888,229	58,888,510	58,888,512	58,888,523	58,888,528	58,888,542	58,888,908	58,889,003	58,889,006	58,889,249	58,890,236	58,890,419	58,890,643	58,890,706	58,890,736	58,890,995	58,890,998	58,891,175	58,891,646	58,891,943	58,892,565	58,892,841	58,893,286	58,893,428	58,893,441	58,893,457	58,894,209	58,894,287	58,894,288	58,894,301	58,894,425	58,894,468	58,895,019	58,895,026	58,895,062	58,895,270	58,895,566	58,895,593	58,895,654	58,895,715	58,895,808	58,896,041	58,896,055	58,896,114	58,896,454	58,897,471	58,897,477	58,898,230	58,898,667	58,899,335	58,899,997	58,900,812	58,901,627	58,901,965	58,902,687	58,903,128	58,903,416	58,903,485	58,903,630	58,904,374	58,904,378	58,904,442	58,904,443	58,904,460	58,904,464	58,904,600	58,904,761	58,905,775	58,905,796	58,905,808	58,906,310	58,907,277	58,908,537	58,908,749	58,909,016	58,909,993
A	C	G	G	A	-	-	T	T/-	4	A	A	C	9	A	T	-	C	G	G	G	A	A	A	C	T	C	G	G	3/-	2/-	C	4/5	T	-	T	T	T	T	T	C	C	A	2	2	A	4	2	T	G	3	A/5	G/-	T	C/-	-	T	A	T/3	-	-	G	T	A	T	2	T	G	2	G	2/-	T/-	3	-	G	A	2/-	2	G	A	A	G	A	G	3	-	C/-	A	A	A	C	G	A	G	A	T	C	G	T	C	T	C	-	C	G	T	3/CA	-	3	C	3	-	T	4/-	-	T	-	5	A	T	C	T	A	G	C	2	A	G	-	T	-	A	T	A	C/20	A	G	4	32	A	T	A	2	A	G/2	2/-	G	A	A	-	16	A	17	G	-	C	G	G	-	T	A	-	T	4/-	2/-	C	C	2	C	-	2	G	-	T	C	-	C	7	A	C	-	11	A	A	-	C	4	C	C	C	A	A	T	A	T	A	G	2	A	A	A	G	T	C	A	G	G	C	2	G	T	G	-	G	C	C	G	11/-	A	T	G	A	4/-	2/-	-	2	-	A	-	G	3	A	-	A	-	T	T	G	T	3	-	T	C	G	A	-	T	-	C	C	-	C	G	C	C	A	-	A	T	A	A	35	4	G	17	A	15/23	G	C	5	G	G	-	A	2/-	G	T	G	G	-	G	A	G	T	2	8/-	3	5	C	-	4	5	A	G	C	A	-	G	C	-	A	4	T	G	C	2	2	A	C	T	A	T	C	A	G	A	2	T	9	T	T	A	2	G	T	T/3	T	G	T	G	-	A	3	T	9	4/3	G	C	T	T	G	23	2/-	-	G	-	G	C	-	-	5	G	G	A	T	A	T