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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 114,493 (bp)   Positions: 323
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.181
.589
.651
.0
.979
.005
.02
.019
.0
.001
.269
.127
.007
.009
.027
.045
.247
.001
.028
.001
.003
.002
.001
.001
.003
.995
.012
.0
.0
.001
.003
.078
.005
.001
.0
.004
.009
.008
.008
.014
.005
.001
.001
.034
.001
.008
.001
.982
.958
.002
.0
.001
.002
.0
.001
.03
.011
.15
.044
.01
.001
.0
.025
.006
.638
.018
.002
--
.003
.202
.083
.073
.088
.002
.56
.16
.269
.037
--
.025
.013
.144
--
.058
.171
.0
.0
.0
.003
.002
.662
.33
.002
.003
.001
.093
.001
.044
.017
.07
.015
.011
.011
.001
.175
.008
.01
.001
.013
.009
.035
.002
.052
.035
.015
.012
.0
.986
.952
.984
.995
.989
.99
--
.0
.072
.001
.001
.009
.125
.116
.002
.013
.001
.001
.011
.0
--
.006
.014
.026
.012
.003
.01
.808
.04
.013
.011
.021
.28
.007
.025
.01
.004
--
.471
.029
.069
--
.05
.135
.018
.0
--
.001
.002
.01
.0
--
.983
.003
.047
.0
.0
.001
.001
.003
.001
.001
.051
.054
.097
.135
.138
.007
.234
.0
.003
.001
.033
.033
.058
--
--
.421
.005
.017
.136
.175
.139
.007
.0
.063
.086
.013
.001
.052
.38
.001
.062
.001
.034
.0
.001
--
--
.043
--
--
--
--
.001
.0
--
.014
.069
.012
.0
.003
.002
.028
.006
.312
.002
.231
.005
.003
.008
.035
.001
.013
.069
.018
.351
.197
.021
.0
.04
.015
.001
.063
.003
.019
.04
.46
.006
.043
.294
.004
.002
.001
.009
.0
.03
.124
.008
.061
.003
.803
.211
.043
.166
.168
.279
.043
.002
.029
.001
.03
.065
.039
.061
.061
.001
.002
.009
.001
.0
.943
.001
.0
.002
.001
.178
.013
.118
.006
--
--
.012
.018
.002
.018
.002
.019
.001
.001
.037
.028
.021
.074
.086
.001
.002
.003
.001
.0
.07
.067
.004
.001
.003
.205
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--
--
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
Nfkb1
A
C
T
C
A
T
G
G
C
A
G
C
T
G
G
T
A
A
C
A
C
G
T
C
A
C
T
G
T
G
G
T
A
T
G
T
A
A
C
T
A
T
A
T
A
A
G
G
G
A
A
G
C
C
T
A
C
G
T
A
A
C
A
G
15
G
C
T
T
C
5
4
G
G
2
T
T
T
T
12
10
T
G
G
G
C
G
A
C
T
G
A
T
C
A
C
T
T
G
C
C
A
T
T
T
T
A
G
G
A
G
A
T
T
C
G
T
C
G
C
G
G
C
T
C
C
C
T
G
G
A
T
T
6
4
T
A
7
C
C
T
G
C
A
A
G
T
C
C
G
A
G
C
T
C
G
T
T
T
G
G
C
A
A
T
G
A
C
A
A
T
T
A
C
G
A
C
C
C
14
10
C
C
A
T
C
G
C
C
A
A
G
A
G
A
G
2
10
6
3
G
C
C
A
G
T
G
C
G
A
A
G
G
T
10
8
A
2
2
A
G
A
G
G
A
A
G
C
G
C
A
C
C
C
A
A
C
C
C
A
C
G
C
3
21
A
3
C
T
C
T
A
A
C
C
C
C
T
A
A
G
A
C
5
10
G
T
A
C
G
C
10
8
G
G
A
T
A
A
C
C
A
A
G
A
A
C
T
G
6
G
A
T
A
T
G
A
4
T
12
T
G
T
T
G
C
T
G
A
T
T
G
10
G
4
T
G
A
G
C
A
A
T
  259,330,534
  259,330,566
  259,330,567
  259,330,627
  259,331,084
  259,331,480
  259,331,707
  259,331,953
  259,332,182
  259,332,212
  259,332,349
  259,332,570
  259,332,877
  259,333,466
  259,333,546
  259,333,550
  259,333,587
  259,333,758
  259,334,078
  259,334,123
  259,334,584
  259,335,183
  259,335,466
  259,335,496
  259,335,695
  259,335,831
  259,335,932
  259,336,039
  259,336,071
  259,336,099
  259,336,276
  259,336,330
  259,336,418
  259,336,646
  259,336,859
  259,337,349
  259,337,392
  259,337,450
  259,337,582
  259,337,592
  259,337,876
  259,338,026
  259,338,170
  259,338,248
  259,338,622
  259,338,790
  259,338,868
  259,339,197
  259,339,525
  259,340,048
  259,340,337
  259,340,633
  259,341,092
  259,341,137
  259,341,447
  259,341,586
  259,341,690
  259,341,926
  259,341,989
  259,342,234
  259,342,256
  259,342,326
  259,342,341
  259,342,772
  259,342,938
  259,343,080
  259,343,173
  259,343,533
  259,343,874
  259,343,905
  259,343,946
  259,343,947
  259,343,987
  259,344,268
  259,344,459
  259,344,503
  259,344,844
  259,344,876
  259,345,235
  259,345,385
  259,345,551
  259,345,690
  259,345,846
  259,346,033
  259,346,047
  259,346,316
  259,346,864
  259,346,899
  259,347,063
  259,347,214
  259,347,529
  259,347,584
  259,347,805
  259,348,236
  259,348,652
  259,349,423
  259,349,532
  259,349,611
  259,350,308
  259,350,603
  259,350,755
  259,351,473
  259,351,618
  259,351,985
  259,352,238
  259,352,627
  259,353,703
  259,354,083
  259,354,155
  259,354,312
  259,354,400
  259,355,146
  259,355,329
  259,355,485
  259,355,715
  259,356,166
  259,357,889
  259,358,716
  259,358,771
  259,359,135
  259,359,145
  259,359,319
  259,359,783
  259,360,131
  259,360,760
  259,360,829
  259,361,083
  259,361,239
  259,361,264
  259,362,096
  259,362,152
  259,362,345
  259,362,508
  259,363,029
  259,363,031
  259,363,339
  259,363,428
  259,363,982
  259,364,003
  259,364,007
  259,364,020
  259,364,023
  259,364,045
  259,364,141
  259,364,361
  259,364,691
  259,364,812
  259,364,875
  259,364,936
  259,365,013
  259,365,100
  259,365,664
  259,366,047
  259,366,111
  259,366,961
  259,367,520
  259,368,111
  259,368,398
  259,368,823
  259,369,280
  259,369,319
  259,369,366
  259,369,666
  259,370,969
  259,371,704
  259,372,309
  259,373,162
  259,374,654
  259,376,146
  259,378,059
  259,378,299
  259,378,387
  259,380,947
  259,382,050
  259,382,907
  259,383,516
  259,385,266
  259,385,570
  259,388,227
  259,388,904
  259,389,397
  259,389,988
  259,390,064
  259,390,067
  259,390,093
  259,392,930
  259,393,186
  259,393,221
  259,393,691
  259,394,076
  259,394,077
  259,394,529
  259,396,100
  259,396,120
  259,396,179
  259,396,543
  259,397,018
  259,397,049
  259,398,263
  259,398,266
  259,398,772
  259,399,151
  259,400,391
  259,400,395
  259,400,457
  259,401,313
  259,404,909
  259,405,463
  259,406,299
  259,406,327
  259,407,251
  259,407,338
  259,407,909
  259,409,099
  259,410,644
  259,410,646
  259,410,725
  259,410,842
  259,410,884
  259,410,942
  259,411,000
  259,411,286
  259,411,878
  259,413,825
  259,414,706
  259,414,851
  259,415,649
  259,416,606
  259,416,999
  259,418,121
  259,419,234
  259,419,274
  259,419,380
  259,421,742
  259,421,833
  259,421,852
  259,422,016
  259,422,179
  259,422,821
  259,422,841
  259,422,941
  259,423,644
  259,424,372
  259,424,737
  259,424,748
  259,424,774
  259,425,584
  259,425,624
  259,425,994
  259,426,191
  259,426,242
  259,426,386
  259,427,200
  259,427,242
  259,427,487
  259,427,936
  259,428,148
  259,428,669
  259,428,725
  259,428,766
  259,429,131
  259,429,146
  259,429,189
  259,429,233
  259,429,515
  259,429,767
  259,430,815
  259,431,217
  259,431,377
  259,431,405
  259,431,476
  259,431,507
  259,431,509
  259,431,854
  259,431,890
  259,431,934
  259,432,002
  259,432,078
  259,432,354
  259,432,426
  259,432,512
  259,432,785
  259,432,849
  259,433,311
  259,433,626
  259,433,726
  259,433,742
  259,433,847
  259,433,988
  259,434,144
  259,434,580
  259,434,647
  259,434,836
  259,434,891
  259,434,955
  259,435,492
  259,435,562
  259,436,399
  259,436,430
  259,436,493
  259,436,672
  259,437,119
  259,437,258
  259,437,820
  259,437,851
  259,438,251
  259,438,281
  259,438,320
  259,438,321
  259,439,087
  259,439,529
  259,439,530
  259,439,749
  259,439,827
  259,441,243
  259,441,772
  259,441,816
  259,442,268
  259,442,276
  259,442,513
  259,443,211
  259,443,214
  259,443,919
G
-
G
T
T
G
A
C
T
G
A
T
C
A
A
A
T
G
T
G
T
3
A
A
G
T
C
T
C
A
A
3
C
G
A
C
C
C
T
A
G
2
G
C
C
C
A
A
A
G
G
2
T
T
G
C
T
A
2
G
C
T
G
2
-
A
T
C
C
2
5/-
-
A
T
-
C
A
G
2
12/-
-
G
T
T
C
T
A
T
G
C
A
G
G
T
G
T
C
C
A
T
T
T
C
-
G
C
AT/4
A
A
9
A
G
C
A
T
A
C
31
G/A
C/31
G/31
A
T
5
T
A
T
C
A
A
G
C
C
-
4/-
4
G
-
-
-
A
-
-
G
C
A
A
T
T
C
T
2
G
G
T
A
C
C
C
G/7
3
T
G
C
C
A
T
T
3
2
A
A
G
T
A
G
A
G
T
-
-
5
-
G
5
C/2
A
T
5
2
12
C
-
2
-
6
-
10/-
6/-
-
C
T
C/2
A/-
A
C
A
G
A
G
G
A
T
G
10/-
-
-
-
2/-
A/5
G/61
G
-
-
-
-
A
A
A
T
5
A
G
T
-
6
A
T
4
G
T
A
T
-
-
G
-
2
C
T
C
C
G
C/T
T
A
3
C
2
-
A
T
2
-
10/8
A
C
2
45
A
T
10/-
8/-
A
A
G
C
G
G
G
C/5
G
C
A
G
5
G
C
T
-
C
G
C
G
2
A
G
-
C
-
C
C
C
-
2
T
C
5/4
T
C
C
T
-
A
-
C
A
G
A
T
2
-
A