Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 29,239 (bp)   Positions: 77
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
F344/NRrrc (SOLiD) (KNAW) 
.0
.005
.051
.0
.053
.01
.002
.357
.001
.001
.308
.021
.002
.0
.046
.036
.001
.003
.002
.001
.002
.001
.001
.001
.0
.001
.005
.009
.0
.001
.0
.0
.001
.001
.002
.001
.006
.0
.003
--
.024
.001
.467
.971
.0
.117
.046
.317
.104
.092
.001
.098
.22
.005
.001
.999
.0
--
--
.918
--
--
--
--
.095
.0
.035
.0
.0
.012
.0
.069
.002
.0
.034
.021
.101
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Mmp2
Mmp2
Mmp2
Mmp2
Mmp2
Mmp2
Mmp2
Mmp2
G
G
A
G
C
A
G
A
A
G
C
A
G
C
G
A
G
A
T
C
C
A
G
G
T
G
C
T
A
A
T
C
G
G
13
C
C
C
C
A
T
G
4
T
C
T
G
C
A
G
G
G
G
G
C
T
8
T
G
G
G
A
G
T
A
A
C
G
A
C
C
C
G
T
T
A
A
  26,631,445
  26,631,763
  26,631,984
  26,632,059
  26,632,075
  26,633,283
  26,634,160
  26,634,492
  26,634,664
  26,635,259
  26,635,660
  26,636,128
  26,636,368
  26,636,386
  26,637,547
  26,641,386
  26,641,512
  26,643,620
  26,643,806
  26,643,807
  26,644,320
  26,645,582
  26,645,799
  26,645,821
  26,645,862
  26,646,160
  26,646,211
  26,646,233
  26,646,382
  26,646,393
  26,646,395
  26,646,425
  26,646,448
  26,646,544
  26,646,557
  26,646,936
  26,647,004
  26,647,141
  26,647,196
  26,647,995
  26,648,129
  26,648,352
  26,648,479
  26,648,534
  26,648,709
  26,648,839
  26,649,121
  26,649,229
  26,649,348
  26,649,743
  26,650,188
  26,650,207
  26,650,302
  26,650,632
  26,651,597
  26,652,049
  26,652,268
  26,652,512
  26,653,477
  26,654,079
  26,654,199
  26,654,204
  26,654,229
  26,654,272
  26,654,993
  26,655,199
  26,655,294
  26,655,411
  26,655,828
  26,656,170
  26,656,218
  26,656,360
  26,656,414
  26,656,463
  26,656,640
  26,656,650
  26,656,692
G/T
11
3
A
T
A/6
G/-
G
G
C
G
G
C
A
A
A/G
A
G
T/A
C/G
T
G
A
A
C
T
G
C
G
G
C
T
A
A
13/-
G
T
G
A
C
20
T
4/-
C
T
T/C
T
T
T
G/C
A
2
3
A
T
G
8/-
C
A
A
T
G
C
T/19
G
A/G
T
A
G
T
G
G
A
C
A
C
G