Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 68,737 (bp)   Positions: 155
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
ACI/N (KNAW) 
.015
.002
.0
.002
.169
.03
.073
.011
.0
.013
.0
.012
.003
.018
.036
.01
.002
.011
.0
.001
.008
.005
.002
.0
.029
.002
.001
.002
.019
.017
.001
.007
.001
.001
.008
.0
.008
.008
.007
.001
.027
.01
.005
.006
--
.018
.097
.0
.029
.013
.547
.006
.02
.039
.016
.009
.008
.025
.0
.002
.054
.001
.0
.01
.002
--
--
--
.001
.927
.002
.001
.009
.012
.001
.001
.002
.007
.0
.624
.402
.001
.976
.181
.001
.349
.001
.902
.901
.001
.002
.002
.198
.033
.001
.001
.047
.056
.03
.419
.026
.017
.451
.747
.001
.003
.005
.002
.001
.0
.0
.002
.0
.003
.0
.002
.006
.0
.001
.011
.001
.0
.001
.007
.011
.002
.004
.0
.005
.002
.059
.763
.062
.026
.003
.001
.002
.0
.03
.007
.005
.002
.0
.002
.002
.0
--
--
.308
.003
.019
.0
.018
.023
.063
Lpar3
Lpar3
Lpar3
Lpar3
Lpar3
Lpar3
Lpar3
Lpar3
Lpar3
Lpar3
Lpar3
Lpar3
Lpar3
Lpar3
Lpar3
Lpar3
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
A
T
C
G
A
A
A
T
C
G
T
G
T
A
A
T
C
A
G
G
G
G
C
T
T
G
G
G
4
A
G
A
C
G
C
C
C
C
A
T
T
G
G
C
G
C
A
A
G
T
G
G
A
T
C
C
A
T
G
2
T
C
T
G
G
2
A
A
G
C
C
C
G
C
T
G
G
C
G
A
G
A
T
T
G
C
A
T
C
T
G
T
G
T
C
C
T
A
G
C
G
C
T
C
C
A
C
C
G
C
A
T
A
C
T
T
A
T
A
T
C
T
C
A
T
A
C
T
C
G
T
C
T
C
C
T
A
A
T
C
2
G
C
C
T
T
C
G
T
C
C
T
2
A
  270,611,318
  270,611,510
  270,611,543
  270,611,698
  270,611,983
  270,612,150
  270,612,212
  270,613,496
  270,614,005
  270,614,771
  270,615,324
  270,616,185
  270,616,941
  270,617,860
  270,618,237
  270,618,272
  270,618,661
  270,618,803
  270,618,998
  270,619,003
  270,619,581
  270,619,624
  270,620,774
  270,620,811
  270,620,968
  270,621,115
  270,621,199
  270,621,254
  270,621,320
  270,621,400
  270,621,564
  270,621,664
  270,621,829
  270,622,009
  270,622,077
  270,622,209
  270,622,279
  270,622,436
  270,622,440
  270,623,367
  270,623,962
  270,624,051
  270,624,113
  270,624,886
  270,625,106
  270,625,223
  270,625,571
  270,625,681
  270,625,887
  270,626,005
  270,626,079
  270,626,372
  270,626,486
  270,626,734
  270,627,101
  270,627,641
  270,627,782
  270,628,312
  270,628,581
  270,628,688
  270,628,923
  270,628,976
  270,629,000
  270,629,141
  270,629,430
  270,629,570
  270,629,652
  270,629,666
  270,630,701
  270,632,259
  270,632,375
  270,632,473
  270,632,537
  270,633,349
  270,633,501
  270,633,986
  270,634,098
  270,634,259
  270,634,629
  270,634,732
  270,634,733
  270,634,737
  270,634,866
  270,635,524
  270,635,828
  270,635,947
  270,636,275
  270,636,478
  270,636,496
  270,637,823
  270,638,070
  270,638,169
  270,638,324
  270,638,351
  270,638,735
  270,638,739
  270,639,187
  270,639,592
  270,639,662
  270,639,869
  270,639,932
  270,640,036
  270,640,072
  270,640,100
  270,640,228
  270,640,264
  270,640,265
  270,640,276
  270,640,319
  270,640,445
  270,640,483
  270,640,871
  270,641,889
  270,642,925
  270,644,772
  270,646,233
  270,646,747
  270,646,967
  270,647,041
  270,647,137
  270,647,577
  270,647,935
  270,647,938
  270,648,024
  270,648,181
  270,648,300
  270,648,675
  270,648,792
  270,649,293
  270,649,336
  270,650,378
  270,650,970
  270,651,124
  270,651,125
  270,651,578
  270,652,194
  270,652,217
  270,652,245
  270,652,293
  270,652,350
  270,652,464
  270,652,549
  270,652,554
  270,652,660
  270,652,661
  270,652,752
  270,654,351
  270,654,406
  270,655,461
  270,656,174
  270,657,207
  270,657,959
  270,658,854
  270,659,013
  270,659,254
2
G
C
-
A
G
T
G
C
A
A
A
A
C
2
A/C
C
A
C
A
A
A
-
T
C
C
A
C
T
-
G
A
G
T
A
C/A
C/5
T
A
G
G
2
T
A
T
A
T
C
8
A
C
-
A
G
C
T
C/A
G
C
T
-
C
T
C
A
T
-
T
G
G/T
T
A
T
T
A
C
-
A
A
A
T
T
G
T/A
G
G/C
T
G
A
T
G
12
C
A
C
T
T
-
8
A
T
A
C/G
C
T
C/T
A/T
T
A
A
T
G
C
T
G
C
C
C
G
5
3/TG
T
G
T
G
C
T
T
C
T
A
C
C/T
C
A
T
C
C
C
C
T
-
A
A
G
C
C
C/2
T
T/A
T
T
C
2/-
G