Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 71,381 (bp)   Positions: 121
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
MR/N (KNAW) 
.384
.225
.009
.0
.008
.377
.009
.001
.025
.011
.018
.089
.04
.001
.07
--
--
--
--
--
--
--
--
.001
.001
.001
.047
.37
1.0
.309
.002
.058
.012
.004
.996
.0
.355
.006
--
.022
.254
.028
.02
--
.19
.029
.271
.224
.101
.03
.026
.092
.001
.011
.0
.001
.021
.031
.001
.001
.014
.005
.0
.0
.001
.06
.002
.001
--
--
.008
.015
.266
.035
.0
--
--
.03
.175
.224
.008
.007
.082
.073
--
--
.008
.004
--
.01
.002
.009
.091
.023
.007
.127
.059
.014
.01
.06
.161
.001
.01
.043
.003
.084
.0
.199
.002
.001
.0
.006
.027
.0
.001
.002
.001
.0
.001
.007
.007
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
A
G
C
T
T
C
A
G
G
A
C
G
A
5
T
C
T
T
T
T
C
T
G
A
G
A
G
A
G
T
T
G
2
T
G
A
C
8
G
C
G
T
A
G
C
C
G
G
C
T
C
C
G
G
G
A
G
C
T
G
A
T
G
T
T
A
A
A
C
G
A
C
A
C
T
T
C
2
G
C
T
T
G
A
C
3
G
C
T
T
G
T
T
G
C
G
4
G
T
T
C
C
T
A
T
C
G
G
A
T
T
A
A
A
T
T
A
T
T
T
T
  62,960,797
  62,960,957
  62,962,910
  62,964,030
  62,964,419
  62,964,606
  62,965,513
  62,966,266
  62,967,138
  62,967,287
  62,967,957
  62,968,182
  62,969,531
  62,971,039
  62,971,454
  62,972,933
  62,972,990
  62,972,992
  62,973,045
  62,973,142
  62,973,145
  62,973,232
  62,974,601
  62,975,124
  62,975,215
  62,975,962
  62,977,027
  62,977,444
  62,979,314
  62,979,934
  62,981,000
  62,982,477
  62,983,266
  62,984,317
  62,985,158
  62,985,459
  62,986,146
  62,986,411
  62,986,927
  62,988,005
  62,988,566
  62,989,071
  62,991,243
  62,992,152
  62,992,267
  62,992,346
  62,993,147
  62,993,491
  62,993,513
  62,994,098
  62,994,099
  62,994,473
  62,994,533
  62,995,285
  62,996,293
  62,997,288
  62,997,809
  62,997,915
  62,999,043
  62,999,197
  63,000,667
  63,001,136
  63,001,286
  63,002,303
  63,002,958
  63,003,034
  63,005,207
  63,005,930
  63,006,301
  63,006,642
  63,006,816
  63,006,825
  63,007,713
  63,007,735
  63,007,969
  63,008,483
  63,008,484
  63,009,409
  63,009,574
  63,011,155
  63,013,438
  63,013,697
  63,013,877
  63,013,931
  63,014,240
  63,014,422
  63,014,853
  63,014,981
  63,015,618
  63,015,969
  63,017,236
  63,017,771
  63,018,368
  63,019,160
  63,020,957
  63,022,196
  63,022,419
  63,022,619
  63,022,677
  63,022,891
  63,023,279
  63,023,302
  63,023,644
  63,024,263
  63,024,302
  63,024,737
  63,025,629
  63,026,063
  63,026,194
  63,026,309
  63,026,868
  63,029,022
  63,030,789
  63,031,238
  63,031,288
  63,031,475
  63,031,597
  63,031,906
  63,031,981
  63,032,076
  63,032,130
G
A
T
G
C
G
-
T
G/C
T
T
A
-
-
C
T
C
C
C
A
T
C
T
C
A
G
A
G
A
C
T/C
A
-
C
A
G
A
-
A
C/T
23
T/C
C
T
2
A
A
A
2
C
T
3
A
A
A
G
T
A
2
T
A/3
G
C
C
C
T
A/-
G
C/T
C
G
T
C
T
C
T/C
C/T
-
A
T
C
C
2
G
C/A
-
T
T
C
3
A
C
C
A
T
A
4/-
A
C
T/2
T
A
C
T
2
2
T
T
G
C
C
G
G
T
C
G
C
C
A
C
C