Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 71,381 (bp)   Positions: 107
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SS/JrHsdMcwi (MCW) 
.384
.225
.076
.072
.009
.194
.001
.002
.001
.0
.0
.008
.377
.021
.027
.008
.009
.002
.028
.011
.089
.01
.07
.085
--
--
--
--
--
--
--
--
--
.001
.37
.179
.819
.871
.913
.002
.011
.043
.779
.013
.006
.029
.0
.355
.028
.053
.001
.029
.101
.242
.091
.002
.0
.003
--
.089
.12
.014
--
--
--
--
--
.0
.04
.011
.724
.14
.005
.003
--
--
.703
.0
--
--
--
.056
.01
--
--
.007
.013
.327
.091
.007
.127
.01
.002
.001
.0
.0
.006
.027
.0
.001
.061
.027
.001
.0
.001
.007
.007
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
Lemd3
A
G
20
T
C
2
9
G
4
2
T
T
C
10
A
C
A
C
C
A
G
G
T
C
4
2
C
T
T
T
T
C
C
A
A
T
C
A
2
T
8
2
C
T
T
A
A
C
T
A
C
C
C
C
2
G
C
12
T
2
6
A
T
T
T
T
T
T
2
3
T
T
2
T
A
G
G
T
A
T
G
C
T
2
T
T
T
C
T
C
G
T
4
A
T
C
A
A
A
T
A
G
A
T
T
T
T
  62,960,797
  62,960,957
  62,962,160
  62,962,187
  62,962,910
  62,963,116
  62,963,159
  62,963,167
  62,963,811
  62,963,813
  62,964,030
  62,964,419
  62,964,606
  62,964,926
  62,964,927
  62,965,499
  62,965,513
  62,967,092
  62,967,107
  62,967,287
  62,968,182
  62,969,213
  62,971,454
  62,972,207
  62,972,798
  62,972,800
  62,972,865
  62,972,990
  62,972,992
  62,973,045
  62,973,142
  62,973,145
  62,974,660
  62,975,962
  62,977,444
  62,977,452
  62,978,074
  62,978,076
  62,978,764
  62,981,000
  62,981,017
  62,981,663
  62,982,902
  62,983,267
  62,983,805
  62,984,536
  62,985,459
  62,986,146
  62,989,071
  62,989,371
  62,989,503
  62,992,346
  62,993,513
  62,993,532
  62,994,474
  62,995,526
  62,998,871
  62,999,230
  62,999,777
  63,000,029
  63,000,039
  63,000,667
  63,001,646
  63,001,650
  63,001,654
  63,001,658
  63,001,662
  63,002,303
  63,002,662
  63,003,695
  63,003,719
  63,003,761
  63,003,769
  63,004,547
  63,006,574
  63,006,642
  63,007,676
  63,007,969
  63,008,372
  63,008,525
  63,008,544
  63,012,938
  63,012,974
  63,012,982
  63,012,996
  63,013,697
  63,018,224
  63,018,323
  63,018,368
  63,020,957
  63,022,196
  63,022,677
  63,023,071
  63,023,461
  63,026,868
  63,026,896
  63,029,022
  63,030,789
  63,031,238
  63,031,288
  63,031,361
  63,031,405
  63,031,597
  63,031,906
  63,031,981
  63,032,076
  63,032,130
G
A
-
T/C
T
2/-
-
-
4/-
-
G
C
G
-
A/2
C/3
-
CA/3
2
T
A
T
C
T
4/-
-
T
C
C
C
A
T
C/T
G
G
2
4
C
-
C
-
-
2
-
A
2
G
A
C
T
T
A
2
T
-
2
T
-
2
-
6/-
3
T/C
C
C
C
C
C
-
-
C
-
2/-
C
A/-
C
G/-
C
C
A
A
T
-
2/-
C
C
C
T
C
T
A
C
-
-
C
3
G
G
T
C
G
2
C
C
A
C
C