Variant Visualizer (Variants)

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Sequence Annotation

Assembly RGSC_v3.4

Conservation

Genes ( + )

Genes ( - )

RGSC 3.4

SHR/OlaIpcv (ICL)

.298	1.0	.0	.0	.001	.002	.004	.009	.001	.026	.0	.001	.001	.006	.002	.002	.0	.008	.0	.01	.277	.002	.0	.0	.0	.001	.002	.0	.0	.0	.032	.005	.01	.004	.0	.0	.0	.0	.008	.0	.042	.003	.001	.002	.0	.0	--	.005	1.0	.003	.038	.007	.0	.002	.004	.0	.0	.0	.003	.044	.484	.929	.0	.762	.002	.001	.0	.001	.003	.0	--	.001	.004	.26	.008	.001	.002	.007	--	--	.003	.0	.0	.001	.039	.0	.0	.001	.006	.0	.007	.345	.007	.013	.0	.021	.018	.998	.001	.0	.0	.972	.014	.003	.0	.046	.0	.0	.0	.002	.007	.01	.736	.011	.0	.016	.015	.0	.006	.981	.956	.116	.736	.095	.017	.0	.005	.014	.001	.0	.002	.0	.007	.0	.0	.001	.0	.011	.008	.001	.007	.001	.001	.202	.004	.05	.002	.006	.009	.013	.001	.0	.038	.002	.002	.001	.337	--	--	--	--	--	--	--	--	--	--	--	--	--	--	.0	.013	.046	.0	.001	.006	.01	.087	.024	.028	.042	.001	.0	.104	.0	.017	.0	.0	.376	.001	.0	.001	.0	.0	.003	.0	.002	.004	.005	.001	.002	.0	.01	1.0	.001	.086	.001	.0	.002	.002	.995	.0	.006	.005	.017	.001	.0	.0	.0	.002	.0	.0	.0	.033	.0	.002	.007	.001	.005	--	--	.008	.0	.004	.003	.003	.004	1.0	.994	.004	.0	.0	.0	.001	.0	.0	.738	.0	.0	.008	.006	.0	.004	.029	.195	.002	.001	.003	.001	.943	.975	.992	.871	.803	.005	.023	.022	.974	.001	.029	.007	.016	--	.002	.028	.002	--	.005	.001	.003	.036	.007	.003	.0	.002	.02	.003	.071	.001	.001	.016	.0	.0	.0	.0	.021	.016	--	--	.007	.001	.081	.148	.13	.0	.005	.003	.0
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2										Ext2
G	C	G	G	T	T	T	C	C	A	A	G	A	T	G	T	T	T	G	A	T	G	T	G	G	T	A	C	G	G	T	C	C	A	C	C	C	T	C	G	A	G	A	G	C	A	C	T	C	A	C	G	A	T	T	T	G	T	A	C	C	C	C	T	A	G	G	A	T	T	G	C	C	A	A	G	A	A	G	T	T	A	G	G	G	T	T	G	G	G	G	T	A	T	C	C	G	A	G	C	A	T	C	G	A	A	A	T	G	C	G	T	A	T	T	A	A	C	C	C	A	C	C	C	C	C	A	A	A	T	A	G	T	T	G	C	C	A	T	A	G	G	G	C	G	A	A	T	G	G	T	A	G	A	G	G	G	T	G	A	G	C	A	G	T	A	G	A	C	T	G	G	T	C	G	G	C	T	C	T	G	T	C	C	A	C	T	G	T	C	A	T	A	A	T	G	C	C	G	A	A	G	C	C	T	C	A	T	T	T	T	A	T	T	A	G	A	T	T	A	A	A	G	T	G	A	C	C	C	C	A	G	G	C	A	T	G	A	T	C	T	T	G	A	A	A	T	G	A	T	C	G	T	G	A	G	A	A	G	C	T	C	C	C	T	T	T	T	G	C	A	C	G	A	C	G	A	T	T	C	C	C	T	A	G	G	G	T	A	C	G	G	G	C	A	C	T	G	C	G	T	A	C	C	C	G	T	A	C
78,111,440	78,111,460	78,111,520	78,112,300	78,112,491	78,112,493	78,112,585	78,112,908	78,113,253	78,113,304	78,113,713	78,113,745	78,114,139	78,114,276	78,114,584	78,114,800	78,115,065	78,115,237	78,115,555	78,115,726	78,115,834	78,116,090	78,116,183	78,116,194	78,116,198	78,116,237	78,116,271	78,116,702	78,117,091	78,117,739	78,117,967	78,118,454	78,119,472	78,121,714	78,122,495	78,122,623	78,122,624	78,122,646	78,123,623	78,123,801	78,123,967	78,125,008	78,125,337	78,125,615	78,125,828	78,126,017	78,126,524	78,127,654	78,127,929	78,128,232	78,128,436	78,128,457	78,128,529	78,128,644	78,128,739	78,130,421	78,131,205	78,131,508	78,131,824	78,131,953	78,133,982	78,134,013	78,134,836	78,138,401	78,138,493	78,138,789	78,138,889	78,140,159	78,140,385	78,140,572	78,142,277	78,142,420	78,143,127	78,144,220	78,144,261	78,144,674	78,144,952	78,145,100	78,145,406	78,145,535	78,146,731	78,146,910	78,148,656	78,148,689	78,149,000	78,149,104	78,149,936	78,150,656	78,151,103	78,151,443	78,151,981	78,152,942	78,152,964	78,153,806	78,154,655	78,156,829	78,157,504	78,158,291	78,158,857	78,159,225	78,159,242	78,161,850	78,162,076	78,162,081	78,162,519	78,163,817	78,165,655	78,165,786	78,166,036	78,166,062	78,166,936	78,168,149	78,168,700	78,168,717	78,169,203	78,169,574	78,169,851	78,169,885	78,170,584	78,170,756	78,170,777	78,170,812	78,170,883	78,171,028	78,171,610	78,171,662	78,172,390	78,172,780	78,174,305	78,174,606	78,174,682	78,174,925	78,175,168	78,175,188	78,175,201	78,175,242	78,175,344	78,175,506	78,175,699	78,175,748	78,176,154	78,176,177	78,176,934	78,177,602	78,178,016	78,178,320	78,178,609	78,178,700	78,178,704	78,178,764	78,178,913	78,178,921	78,179,381	78,179,853	78,180,992	78,181,437	78,181,577	78,183,559	78,183,610	78,184,024	78,184,073	78,184,075	78,184,265	78,184,455	78,184,494	78,184,587	78,184,979	78,185,054	78,185,441	78,185,582	78,185,600	78,186,661	78,188,035	78,188,124	78,188,230	78,188,299	78,188,561	78,188,563	78,189,198	78,189,636	78,189,638	78,189,653	78,189,946	78,190,053	78,191,486	78,191,617	78,191,940	78,192,085	78,192,086	78,192,206	78,192,270	78,192,397	78,192,508	78,192,833	78,193,088	78,193,119	78,193,243	78,193,270	78,193,557	78,193,558	78,193,569	78,193,805	78,195,059	78,195,280	78,195,346	78,196,439	78,197,456	78,198,118	78,198,135	78,198,151	78,199,340	78,199,766	78,201,225	78,201,802	78,202,531	78,203,405	78,203,743	78,204,267	78,204,349	78,205,168	78,206,543	78,206,710	78,206,750	78,207,059	78,207,124	78,207,176	78,207,546	78,207,912	78,209,218	78,210,633	78,211,064	78,211,088	78,211,818	78,212,256	78,212,283	78,212,621	78,213,324	78,213,344	78,213,935	78,214,198	78,214,440	78,215,303	78,215,338	78,215,352	78,216,019	78,216,213	78,217,120	78,217,130	78,217,273	78,217,327	78,217,619	78,217,772	78,218,003	78,218,139	78,218,203	78,219,277	78,219,323	78,219,539	78,219,721	78,219,770	78,219,826	78,219,969	78,219,990	78,220,007	78,220,125	78,220,274	78,220,369	78,220,379	78,220,975	78,221,210	78,222,036	78,222,170	78,222,308	78,222,550	78,222,700	78,222,778	78,222,830	78,223,173	78,223,534	78,223,558	78,223,596	78,223,712	78,224,000	78,224,037	78,224,353	78,224,656	78,224,771	78,224,832	78,224,916	78,225,106	78,225,142	78,225,328	78,225,767	78,225,812	78,225,836	78,226,440	78,226,672	78,226,692	78,232,643	78,232,754	78,234,094	78,234,587	78,235,988	78,237,080	78,237,973	78,238,309	78,241,875	78,241,978	78,242,349
A	T	C	C	C	C	C	T	G	G	G	T	G	C	A	C	C	C	C	G	C	T	C	C	A	C	G	A	C	A	G	G	T	G	T	T	T	C	C/T	A	G	A	G	A	T	G	G	C	A	T	T	T	G	C	C	C	C	C	G	T	T	A	T	C	G	A	C	G	C	C	G/A	A	T	G	G	A	G	G	A	G	C	G	C	A	G/A	C	C	C	T	A	A	C	G	C	T	T	A	G	A	T	C	C	T	A	G	G	G	C	A	T	A	C	G	C	C	G	C	T	G	G	C	G	T	T	T	A	G	G	G	C	T	A	C	C	T	T	T	G	C	G	A	T	A	T	T	C	G	A	T	C	C	G	T	C	A	A	A	C	C	A/G	G/A	C/T	G	C	C	G	G/A	A/T	T	C	A	C	A	T	C	A	A	C	T	C	T	A	T	T	G	T	C	C	A	T	G	C	T	G	G	C	T	A	T	T	G	C	T	G	C	T	T	C	C	C	C	G	C	G	G	A	G	A	C	G	G	G	A	C	A	T	T	G	T	A	G	A	A	T	G	C	A	G	C	G	C	G	A	G	G	G	C	A	G	A	T	A	C	C	G	A	G	G	A	G	C	T	T	T	A	C	C	A	G/C	T	G	A	A	G	T	A	G	C	C	T	A	T	C	G	A	A	C	C	T	G	A	T	A	T	G	T	C	T	C/A	G/A	C	G	T	T	T	C	T/C	G	T