Variant Visualizer (Variants)

Submit Data | Help | Video Tutorials | News | Publications | Download | REST API | Citing RGD | Contact

Sequence Annotation

Assembly RGSC_v3.4

Conservation

Genes ( + )

Genes ( - )

Rnor 5.0

SHR/OlaIpcv (KNAW)

.047	.0	.0	.001	.0	.024	.007	.976	.003	.019	.334	.862	.015	.048	.002	.015	.005	.002	.088	.025	.01	.033	.001	.948	.059	.001	.007	.952	.091	.272	.0	1.0	.027	.024	.043	.162	.045	.031	.015	.005	.123	.086	.004	.34	.342	.014	--	--	.021	.524	.013	.283	.033	.042	.002	.014	.266	.022	--	--	.027	.021	.058	.003	.001	.006	.023	.005	.002	.02	.04	.034	.112	.882	.069	.001	.897	.285	.02	.002	.182	.212	.004	.005	.002	.0	.021	.488	.033	.003	.041	.002	.021	.018	.0	--	--	.998	1.0	.005	.001	.001	.002	.001	.009	.17	.059	.015	.001	.012	.014	.003	.0	.0	.001	.004	.008	.86	.001	.0	.0	.001	.002	.004	.001	.205	.001	.0	.016	.175	.014	.011	--	--	--	.463	--	--	--	--	--	--	.076	.276	.939	.005	.055	.06	.079	.058	.002	.0	--	.003	.004	--	--	--	.074	.0	.0	.0	.002	.014	.004	.001	.004	.04	.012	.005	.279	.096	.012	--	.018	.536	.021	.0	.001	.001	.002	.002	.003	.997	.009	.013	.002	.024	.014	.001	.059	.007	.003	--	--	--	--	.06	.048	.066	.998	.004	.001	.06	.14	.068	.015	.002	.082	.03	.01	.0	.001	.002	.003	.004	.003	--	.047	.002	.12	.122	.001	.022	.018	.164	.123	.039	.003	.006	.016	.013	.006	.117	.269	.094	--	--	--	--	--	.002	.003	.008	.003	.0	.01	.004	.0	.0	.007	.421	.007	.0	.037	.013	.003	.102	.007	.001	.003	.0	.0	.013	.005	.002	.033	.002	.0	.013	.125	.0	.001	.012	.038	.007	.004	.003	.042	.011	.021	.503	.027	.094	.866	.007	.008	.26	.002	.004	.188	.035	.227	.167	.03	.021	.002	.047	.0	.005	.002	.001	.024	.0	.602	.001	.001	.0	.0	.007	.0	.014	.009	.003	.0	.001	.0	.003	.008	1.0	.032	.873	.099	.001	.126	.074	.013	--	--	.001	.002	.014	.001	.036	.001	.009	.0	.863	.034	.013	.0	.0	.0	.0	.0	.001	.006	.106	.026	.009	.002	.001	.0	.028	--	.105	.323	.001	.002	.05	.987	.003	.0	.0	.008	--	--	--	--	--	--	--	--	--	--	.001	.033	.033	.012	.001	.113	.002	.0	.002	.0	.002	.054	.239	.198	.202	.026	.006	.006	.017	--	--	.01	.077	.0	.001	.001	.005	.002	.033	.0	.054	.001	.066	.003	.516	.244	.013	--	--	--	.008	.078	.005	.002	.008	.008	.105	.106	.006	.005	.013	.048	.105	.121	.003	--	.01	.052	.002	.004	.031	--	--	--	--	--	--	1.0	.0	.017	.003	.048	.154	.0	.182	.031	.0	.026	.001	.001	.01	--	--	.01	.009	.001	.005	.014	.294	.008	.009	.0	.001	.008	.004	.011	.057	.001	.008	.004	.001	.001	.0	.131	.091	.002	.044	.006	.012	.007	.953	--	.075	.001	.002	.004	.672	.331	.001	.0	.1	--	.026	.001	.025	.035	.999	.0	.002	.007	--	.028	.024	.004	.01	.012	.085	.015	.002	.013	.009	.346	.0	.007	.007	.0	.001	.927	.744	.149	.152	.107	.098	.082	.015	.058	.043	.0	.107	.001	.001	.005	.512	.183	.0	.004	.0	.002	.001	.007	--	--	--	--	--	.018	.076	.003	.009	.001	.998	.021	.007	.0	.002	.003	.353	.0	.61	.0	.001	.001	.002	.0	.195	.0	.222	.08	.001	.0	.0	.0	.002	.003	.009	.004	.003	.004	.033	.029	.031	.028	.025	.16	.013	.01	.001	.002	.026	.019	.015	.022	.005	.418	.371	.556	.119	.963	--	.001	.0	.006	--	--	.072	.005	.008	.022	--
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3										Diaph3
C	2	T	C	G	T	A	A	G	T	G	A	T	T	A	T	A	T	G	G	66	A	G	C	C	A	G	T	T	G	G	G	T	T	A	G	G	T	A	T	C	C	T	C	C	T	G	A	G	A	A	C	A	T	A	T	A	C	T	T	C	C	A	A	A	G	G	2	4	A	G	G	C	T	G	T	C	A	C	T	C	A	C	T	T	C	T	T	C	C	A	A	4	2	A	T	C	T	A	A	T	G	C	T	T	T	C	C	G	A	T	G	22	T	C	G	9	C	C	T	5	C	G	C	C	16	2	A	C	C	A	A	C	G	G	G	C	G	C	A	C	C	A	2	C	T	A	T	4	C	C	T	A	G	C	T	T	T	A	A	C	T	G	T	C	G	A	C	T	T	C	G	G	2	C	T	T	G	A	A	T	T	3	G	A	T	T	T	T	C	T	T	T	A	T	A	A	G	T	C	A	C	C	A	C	G	G	T	C	T	T	C	C	C	C	A	T	C	A	A	4	2	G	A	C	C	C	G	G	T	T	6	2	G	A	A	6	C	A	T	6	A	G	G	T	T	A	A	T	T	A	C	8	G	C	G	76	C	C	G	C	T	A	G	G	G	C	A	G	G	A	T	T	A	C	A	A	T	T	A	G	G	A	A	T	A	C	T	T	T	C	A	T	A	C	3	C	T	A	G	A	C	G	C	C	G	T	G	A	T	G	A	A	T	C	T	G	A	G	G	A	G	A	C	C	T	C	C	T	C	G	G	T	C	C	A	T	2	G	T	C	G	G	G	A	C	T	C	A	A	C	C	C	C	C	A	A	G	T	T	G	A	G	G	T	T	C	C	T	G	A	A	G	T	G	6	T	G	2	G	G	A	C	T	T	A	A	C	A	G	A	G	G	T	2	C	C	2	T	G	T	C	C	G	C	A	C	G	G	C	A	A	T	A	G	A	C	A	T	C	T	C	T	C	C	G	C	2	A	T	C	A	C	C	G	C	A	4	C	3	T	C	C	T	G	A	A	C	A	G	G	G	A	A	G	T	A	G	A	G	C	G	A	A	A	G	T	A	4	T	T	G	G	A	G	T	G	A	A	C	C	G	T	C	2	T	C	C	A	G	G	A	C	T	G	T	A	T	2	A	A	G	G	T	C	104	T	C	A	A	3	2	T	3	A	C	A	G	G	T	A	2	T	A	T	31	T	T	T	C	7	A	G	T	G	G	C	A	A	C	G	8	7	T	T	A	C	A	A	26	G	T	T	A	A	G	G	T	T	A	T	C	C	G	C	C	C	C	T	G	T	G	40	C	C	T	A	C	C	C	C	T	T	A	A	T	A	A	5	C	T	C	T	A	C	A	C	A	C	C	A	C	2	A	G	G	A	T	A	2	C	A	C	A
73,539,022	73,539,373	73,539,478	73,540,406	73,540,408	73,541,561	73,542,155	73,542,673	73,543,664	73,544,743	73,544,951	73,545,496	73,545,529	73,545,937	73,545,982	73,546,459	73,547,001	73,550,654	73,550,693	73,550,930	73,551,358	73,551,861	73,553,011	73,554,238	73,554,301	73,556,729	73,556,921	73,561,114	73,562,012	73,564,581	73,567,165	73,567,732	73,568,333	73,568,390	73,568,606	73,568,658	73,568,811	73,570,764	73,570,988	73,573,873	73,573,996	73,575,487	73,576,113	73,576,531	73,579,291	73,579,497	73,581,447	73,582,364	73,585,134	73,585,742	73,586,056	73,586,642	73,587,433	73,589,118	73,589,196	73,589,497	73,589,632	73,589,684	73,590,327	73,590,345	73,590,583	73,590,768	73,590,940	73,592,105	73,592,108	73,592,679	73,592,881	73,592,902	73,592,905	73,594,600	73,595,141	73,595,142	73,595,186	73,595,743	73,597,441	73,598,190	73,601,205	73,601,238	73,602,752	73,604,069	73,605,569	73,606,502	73,606,804	73,606,959	73,607,201	73,607,289	73,608,632	73,608,774	73,608,792	73,609,039	73,610,808	73,611,018	73,615,418	73,615,420	73,615,598	73,617,155	73,617,991	73,620,713	73,620,832	73,621,774	73,622,607	73,622,998	73,623,412	73,623,856	73,624,277	73,625,314	73,625,379	73,625,861	73,625,975	73,626,553	73,626,867	73,628,933	73,629,058	73,629,884	73,629,940	73,630,045	73,630,669	73,630,961	73,631,070	73,631,071	73,631,687	73,632,326	73,632,963	73,633,515	73,633,670	73,634,265	73,634,735	73,634,736	73,635,855	73,638,448	73,638,877	73,638,964	73,639,585	73,640,878	73,641,079	73,645,308	73,646,419	73,647,096	73,647,113	73,647,116	73,647,117	73,647,179	73,647,348	73,650,228	73,650,805	73,650,970	73,651,060	73,651,067	73,651,263	73,651,273	73,651,538	73,651,566	73,652,695	73,653,213	73,653,282	73,653,358	73,653,359	73,653,361	73,658,539	73,659,482	73,660,130	73,660,224	73,660,844	73,661,159	73,661,302	73,661,417	73,662,562	73,662,812	73,662,976	73,663,189	73,663,319	73,663,486	73,664,393	73,664,574	73,666,289	73,666,748	73,666,942	73,668,016	73,668,564	73,669,081	73,669,837	73,669,866	73,670,032	73,670,949	73,673,473	73,673,568	73,674,069	73,675,306	73,676,606	73,676,720	73,676,796	73,676,967	73,676,993	73,677,212	73,677,577	73,677,837	73,679,369	73,679,440	73,679,443	73,681,451	73,682,416	73,682,911	73,683,655	73,684,760	73,684,977	73,685,266	73,685,297	73,685,638	73,686,067	73,686,238	73,686,745	73,686,798	73,686,802	73,686,804	73,686,806	73,686,809	73,686,942	73,688,509	73,692,889	73,692,938	73,693,551	73,693,553	73,693,632	73,693,654	73,693,904	73,694,952	73,694,958	73,694,966	73,694,974	73,694,975	73,694,982	73,695,372	73,695,376	73,695,914	73,696,537	73,697,106	73,698,174	73,698,239	73,698,279	73,698,400	73,698,424	73,698,810	73,699,275	73,699,737	73,699,842	73,700,718	73,700,851	73,701,136	73,701,623	73,701,644	73,701,884	73,702,712	73,703,147	73,703,299	73,704,121	73,704,500	73,704,617	73,705,672	73,705,862	73,705,871	73,705,876	73,706,054	73,707,053	73,707,082	73,707,118	73,707,207	73,707,458	73,707,568	73,707,595	73,708,238	73,708,281	73,708,368	73,709,794	73,709,849	73,710,002	73,710,484	73,710,843	73,711,037	73,711,076	73,711,546	73,711,643	73,712,747	73,712,909	73,714,677	73,715,553	73,715,694	73,715,695	73,715,740	73,716,847	73,716,994	73,719,570	73,719,653	73,720,122	73,721,139	73,722,298	73,722,300	73,724,092	73,724,968	73,726,870	73,727,067	73,727,122	73,727,464	73,727,770	73,727,951	73,728,117	73,728,500	73,730,367	73,730,487	73,731,265	73,731,292	73,731,454	73,731,957	73,731,983	73,732,116	73,732,168	73,732,319	73,732,507	73,733,062	73,733,119	73,733,717	73,734,385	73,734,420	73,736,509	73,737,060	73,737,114	73,737,865	73,738,392	73,739,438	73,740,679	73,741,645	73,742,179	73,742,225	73,742,563	73,743,372	73,743,572	73,744,226	73,744,262	73,744,565	73,744,807	73,744,874	73,745,447	73,745,837	73,746,732	73,747,117	73,750,162	73,751,157	73,753,445	73,754,937	73,755,237	73,758,204	73,761,283	73,761,338	73,761,533	73,762,909	73,762,974	73,763,161	73,763,861	73,764,352	73,764,808	73,765,253	73,765,439	73,765,589	73,765,657	73,765,701	73,765,721	73,765,933	73,765,984	73,765,985	73,766,255	73,768,867	73,768,931	73,768,943	73,770,359	73,770,519	73,770,524	73,771,445	73,771,795	73,771,914	73,772,105	73,772,121	73,772,372	73,772,518	73,772,557	73,772,633	73,772,728	73,772,767	73,773,024	73,773,043	73,773,050	73,773,141	73,773,170	73,773,180	73,773,355	73,773,366	73,778,432	73,778,434	73,778,540	73,778,593	73,778,737	73,778,968	73,778,993	73,779,294	73,779,321	73,779,788	73,779,932	73,780,400	73,780,452	73,780,881	73,781,017	73,781,097	73,781,376	73,781,591	73,781,758	73,781,760	73,781,783	73,782,059	73,782,179	73,782,239	73,782,318	73,782,344	73,782,345	73,782,725	73,782,727	73,783,362	73,783,364	73,783,390	73,783,453	73,783,662	73,783,663	73,783,763	73,784,133	73,784,640	73,784,788	73,784,837	73,784,848	73,785,008	73,785,168	73,785,269	73,785,324	73,785,328	73,785,668	73,785,868	73,786,218	73,786,348	73,786,768	73,786,873	73,787,310	73,787,600	73,787,772	73,788,354	73,788,495	73,788,623	73,788,674	73,788,731	73,788,957	73,789,454	73,790,076	73,790,143	73,790,256	73,790,275	73,790,413	73,791,542	73,791,567	73,791,598	73,791,928	73,792,054	73,792,487	73,792,636	73,792,730	73,794,302	73,794,863	73,795,170	73,796,556	73,796,596	73,796,672	73,796,776	73,797,638	73,799,796	73,800,079	73,801,163	73,801,442	73,802,709	73,803,974	73,805,131	73,806,662	73,806,703	73,807,247	73,808,137	73,809,412	73,810,469	73,810,470	73,811,684	73,813,288	73,813,407	73,814,103	73,814,428	73,815,199	73,816,482	73,817,022	73,817,945	73,818,333	73,818,553	73,819,980	73,821,160	73,821,474	73,822,777	73,822,942	73,823,999	73,824,125	73,824,658	73,824,697	73,825,340	73,825,854	73,826,069	73,826,262	73,828,194	73,828,901	73,829,534	73,829,925	73,830,808	73,831,420	73,831,846	73,832,287	73,832,373	73,832,824	73,832,826	73,832,858	73,832,860	73,832,863	73,833,090	73,833,898	73,833,920	73,834,997	73,835,910	73,836,024	73,837,293	73,838,817	73,838,967	73,839,122	73,839,366	73,839,820	73,841,908	73,841,909	73,842,974	73,843,544	73,844,075	73,844,930	73,845,043	73,845,078	73,845,248	73,845,522	73,845,537	73,845,624	73,845,879	73,845,882	73,846,371	73,846,527	73,849,108	73,849,187	73,849,206	73,849,335	73,849,520	73,850,925	73,851,467	73,852,088	73,852,095	73,852,100	73,852,121	73,852,133	73,852,620	73,855,594	73,856,880	73,858,956	73,860,441	73,860,483	73,860,487	73,860,491	73,860,497	73,860,505	73,860,520	73,860,522	73,860,524	73,860,526	73,860,536	73,860,538	73,860,547	73,860,549	73,860,550	73,860,730	73,874,058	73,874,059	73,877,132	73,877,133	73,880,895	73,880,900	73,880,901	73,880,922	73,880,929	73,881,021	73,881,095	73,881,137	73,881,808	73,896,963	73,904,968	73,906,903	73,906,960	73,918,370	73,937,082	73,937,085	73,939,718	73,966,665	73,966,666	73,967,263	73,975,564
A	-	A	T	A	3	T	G	T	C	A	C	C	C	G	C	13	C	2	A	-	G	A	T	T	G	5	C	C	C	A	A	C	C	A/9	G/2	5	C	T	A	A	-	C	2	5	G	A	10	T	21	G	5	C	8	G	T/5	-	2	C	3	A	T	G	C	-	A	A	-	-	T	2	10	9	C	A	C	T	C	T	C	T	A/-	G	A	C	T	C	A	T	A	G	C	4/-	2/-	G	C	T	C	G	A/-	C	A	T	C	C	C	T	T	A	G	-	A	-	C	A	A	9/-	G	2	G	-	15	T	T	T	-	2/-	-	3	T	G	G	A	A	C	C	G	A	T	T	T	-	17	-	G	C	G	C	-	A	A	C	C	A	T	3	10	20	T	T	T	C	A	C	C/3	A	C	T	C	C	9	A	A	-	T	C	G	2	T	T	C	C	-	T	9	C	3	A	C	A	A	2	C	4	C	A/-	T	G/2	T/-	T	G	T	T	C	-	A	A	5	T	T/4	C	21	G	G	G	26	G	3	T	G	4/-	2/-	15	24	G	-	-	-	-	C	-	6/-	2/-	A	T	2	-	A	3	C	-	G	T	T	C	A	-	G	C	C	G	T	-	2	T	4/GA	-	T	T	A	A	G	G	A	A	A	11	G	A	3	C	C	C	G	72	-	G	3/5	3	C	3	A	C	C	C	T	T	2	G	C	T	G	C	G	C/-	3/-	T	C	G	A	G	2	A	2	G	A	C	C	G	A	A	G	G	G	T	C	A	3	T	A	-	A	G	T	T	A	33	G	C	G	A	A	C	2	T	G	C	-	C	A	A	A	C	C	T	G	C	A	C	5	C/6	T	T	T	3/CT	3	G	A	A	A	A	C	C	C	C	C	-	A	C	G/-	A/-	A/2	A	C	-	-	2	A	-	A	A	C	T	A	C	G	G	T	G	A	T	T	2	A	-	A	T	-	A	T	C	G	G	A	T	-	A	A	A	T	G	T	A	G	C	G	T	G	A	T	G	T	G	T	-	A	T	-	A/-	C	T	-	T	T	T	5	G	-	-	-	C	A	T	-	A	G	5	T	G	A	T	G/5	C	G	A	C	G	A	T	A	T	A	G	G	G	T	T/11	G	-	G	C	A	A	G	A	-	A	-	G	T	T	GA/3	C	6	-	C	T	G	C	A	C	G	G	C	A	7	G	A	-	G	T	-	A	C	2	-	A	G	-	T	-	-	G	-	G	C/2	A/-	C	A	C	G	2/-	C	G	-	-	G	G	G	A	7/-	C	A	C	2	A	G	G	C	T	A	8/-	7/-	C	C	-	G	G	T	-	T	C	C	-	G	A	A	2	C	G	A	T	T	A	-	-	-	-	-	2	C	G/2	-	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	-	C/9	T/-	C/2	T/-	G	T	T	-	T	-	-	87	C/2	2/-	A/-	-	2	T	C	G	2/-	C/2	A/-	3	A/-