Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 19,390 (bp)   Positions: 114
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
LE/OrlBarth (UDEL) 
.065
--
--
--
--
--
--
--
--
--
.052
.031
.048
.003
.006
.003
.004
.001
.002
.013
.0
.115
.116
.006
.064
.018
.001
.011
.003
.043
.262
.012
.064
.023
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.229
.059
.004
.006
.009
.008
.062
.027
.002
.169
.157
.056
.024
.044
.095
.019
.244
.04
.035
.047
.587
.235
.043
.055
.241
.008
.011
.001
.001
.001
.004
.121
.293
.001
.001
.002
--
--
--
--
--
--
--
--
--
.011
.061
.005
.105
.024
.029
.114
.036
--
--
.023
.021
.0
.002
.209
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Cxcl3
Cxcl3
Cxcl3
Cxcl3
Cxcl3
Cxcl3
Cxcl3
Cxcl3
Cxcl3
Cxcl3
Cxcl3
Cxcl3
C
C
C
A
A
C
G
G
A
2
C
T
T
C
C
A
T
T
G
C
C
A
T
T
C
A
C
G
T
T
C
A
G
C
A
G
T
3
T
C
T
A
A
G
G
G
T
G
A
4
A
A
C
G
T
T
G
A
G
G
T
T
C
T
G
T
G
8
C
T
C
T
C
12
C
A
G
A
C
G
C
C
A
G
A
C
A
A
C
A
G
G
T
A
A
C
2
C
T
C
A
T
G
A
G
G
A
20
A
G
G
7
A
T
  18,729,587
  18,730,134
  18,730,230
  18,731,540
  18,731,766
  18,731,875
  18,731,953
  18,733,139
  18,733,654
  18,734,685
  18,734,889
  18,734,893
  18,734,898
  18,735,631
  18,735,775
  18,735,776
  18,735,788
  18,735,812
  18,735,870
  18,735,987
  18,736,001
  18,736,073
  18,736,147
  18,736,170
  18,736,186
  18,736,475
  18,736,495
  18,736,503
  18,736,665
  18,736,787
  18,736,806
  18,736,853
  18,736,920
  18,736,961
  18,737,162
  18,737,202
  18,737,214
  18,737,227
  18,737,259
  18,737,459
  18,737,485
  18,737,611
  18,737,616
  18,737,793
  18,737,828
  18,737,869
  18,737,896
  18,737,936
  18,737,986
  18,738,032
  18,738,119
  18,738,124
  18,738,138
  18,738,259
  18,738,302
  18,738,356
  18,738,357
  18,738,390
  18,738,512
  18,738,546
  18,738,628
  18,738,689
  18,738,764
  18,738,810
  18,738,819
  18,738,897
  18,738,911
  18,739,021
  18,739,050
  18,739,265
  18,739,326
  18,739,333
  18,739,614
  18,739,626
  18,739,771
  18,739,817
  18,739,821
  18,740,298
  18,740,316
  18,740,628
  18,740,751
  18,741,003
  18,741,019
  18,741,086
  18,741,611
  18,741,632
  18,741,705
  18,741,784
  18,741,907
  18,742,188
  18,742,304
  18,742,397
  18,742,453
  18,742,544
  18,742,635
  18,742,945
  18,742,991
  18,743,206
  18,743,326
  18,743,631
  18,743,749
  18,744,395
  18,744,414
  18,745,063
  18,745,299
  18,745,320
  18,746,376
  18,746,507
  18,746,651
  18,747,415
  18,747,507
  18,747,536
  18,747,655
  18,747,999
T
G
A
G
G
3
A
A
G
-
T
G
C
T
T
G
C
C
A
2
A
G
C
C
T
G
G
A
C
G
G
G
A
T
G
A
C
-
A
2
C
G
2
A
A
A
C
T
G
-
T
G
T
A
C
C
A
G
-
A
C
C
T
G
C
C
A
-
T
C
2
G
T
-
T
G
2
G
T
A
G
T
T
A
2
G
G
G
T
C
A
A
C
C
G
T
-
2
C
T
-
C
A
G
A
A
-
-
G
-
A
-
G
-