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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 128,264 (bp)   Positions: 172
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.024
.0
.0
.0
.0
--
.008
.004
.024
.571
.031
.245
.036
.002
.017
.001
.039
.025
.016
.001
.263
.001
.006
.028
.141
.009
.215
.002
.011
.001
.01
.026
.029
--
--
--
.185
.112
.029
.008
.094
.0
.01
.003
.0
.0
.0
.534
.005
.181
.046
.003
.001
.0
.02
.0
.014
.001
.02
.052
.001
.0
.002
.002
.016
.035
.226
.35
.125
.004
.002
.388
.003
.001
.0
.0
.001
.001
.12
.009
.002
.005
.0
.002
.993
.047
.455
.001
.02
.019
.0
.0
.022
.142
.0
.002
.077
.005
.002
.0
.023
.003
.011
.013
--
.085
.189
.0
.002
.0
.001
.037
.004
.013
.549
.053
.006
.052
.006
.018
.013
.019
.006
.001
.002
.009
.0
.002
.047
.121
.003
.082
.798
.001
.0
.001
.239
.349
.016
.016
.0
.013
--
.009
.288
.022
--
.093
.029
.008
.005
.043
.771
.012
.002
.002
.003
.123
.085
.02
.003
.964
.042
.0
.002
.308
.292
.002
.936
.998
.991
.172
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
--
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--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
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--
--
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--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
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--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
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--
--
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--
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--
--
--
G
2
A
A
G
G
A
G
G
G
A
T
G
C
G
G
T
G
2
C
A
A
T
2
T
4
4
T
T
G
C
G
T
C
C
C
T
4
8
A
A
T
G
G
G
T
C
A
G
A
A
C
G
C
T
C
T
A
T
G
G
G
A
A
A
C
T
A
T
G
A
C
G
C
G
A
A
A
T
T
T
T
G
A
T
T
T
A
A
C
3
C
T
A
C
9
A
T
C
C
C
C
T
T
C
C
C
G
G
A
4
A
A
A
T
A
C
T
G
G
G
G
A
T
6
C
C
T
A
C
G
G
T
T
C
T
A
G
A
C
A
C
A
C
T
A
A
T
G
C
2
G
T
5
C
G
A
A
T
G
2
G
G
A
T
4
C
A
G
2
A
A
  48,074,950
  48,075,602
  48,075,607
  48,075,610
  48,075,613
  48,092,821
  48,093,414
  48,093,418
  48,095,960
  48,096,064
  48,096,215
  48,096,406
  48,096,430
  48,096,527
  48,096,549
  48,096,625
  48,096,754
  48,096,756
  48,096,761
  48,096,835
  48,096,876
  48,097,177
  48,097,861
  48,097,920
  48,098,481
  48,101,063
  48,101,089
  48,101,619
  48,102,141
  48,103,001
  48,103,327
  48,103,903
  48,103,946
  48,104,502
  48,104,520
  48,104,672
  48,106,134
  48,106,596
  48,106,608
  48,106,629
  48,106,731
  48,107,159
  48,107,179
  48,107,191
  48,107,375
  48,107,381
  48,107,427
  48,107,978
  48,108,926
  48,109,411
  48,109,416
  48,109,441
  48,109,472
  48,109,522
  48,109,592
  48,109,891
  48,109,895
  48,109,900
  48,110,069
  48,110,236
  48,110,669
  48,110,730
  48,110,766
  48,110,767
  48,110,970
  48,110,978
  48,111,048
  48,111,652
  48,112,669
  48,113,060
  48,113,163
  48,113,814
  48,114,489
  48,114,490
  48,114,499
  48,114,500
  48,114,503
  48,114,508
  48,114,593
  48,114,821
  48,114,865
  48,114,907
  48,115,265
  48,115,522
  48,115,768
  48,115,877
  48,116,870
  48,117,927
  48,117,935
  48,117,937
  48,118,328
  48,119,029
  48,122,585
  48,123,014
  48,123,476
  48,123,649
  48,126,433
  48,127,624
  48,127,797
  48,128,266
  48,128,545
  48,128,561
  48,128,568
  48,128,905
  48,129,590
  48,130,014
  48,130,168
  48,130,612
  48,130,640
  48,130,906
  48,130,979
  48,131,307
  48,132,753
  48,132,767
  48,134,035
  48,137,764
  48,137,796
  48,137,837
  48,137,894
  48,137,896
  48,138,612
  48,138,700
  48,139,742
  48,143,256
  48,143,782
  48,144,066
  48,148,148
  48,152,794
  48,153,416
  48,154,821
  48,157,708
  48,160,498
  48,161,180
  48,162,212
  48,167,606
  48,169,549
  48,173,462
  48,174,908
  48,175,191
  48,175,192
  48,175,217
  48,175,630
  48,176,270
  48,176,556
  48,177,072
  48,177,921
  48,178,363
  48,179,099
  48,179,598
  48,182,352
  48,183,235
  48,184,097
  48,184,806
  48,189,037
  48,189,042
  48,189,043
  48,189,412
  48,190,556
  48,190,682
  48,191,497
  48,192,491
  48,192,872
  48,193,507
  48,194,438
  48,195,147
  48,197,626
  48,197,648
  48,197,969
  48,201,162
  48,201,269
  48,201,270
  48,201,333
-
-
C
G
T
G/A
A/G
G/5
G/2
G/T
A/G
T/G
G/A
C/T
G/A
G/A
T/13
G/C
2/-
C/T
A/C
A/G
T/C
2/-
T/2
4/-
4/-
T/C
T/2
G/C
C/T
G/A
T/C
C/T
C/G
C/T
T/C
4/-
8/-
A/G
A/G
T/-
G/T
G/T
G/C
T/C
C/-
A/T
G/C
A/C
A/G
C/T
G/T
C/A
T/C
2
T/C
A/G
T/C
G/A
G/A
G/C
A/2
A/G
A/G
C/15
T/C
A/-
T/C
G/A
A/G
C/2
G/A
C/T
G/A
A/G
A/G
A/G
T/A
T/5
T/-
T/-
G/T
A/42
T/G
T/A
T/-
A/G
A/G
C/-
3/-
C/T
T/G
A/G
C/G
9/-
A/T
T/C
C/T
C/T
2
-
2
T/G
C/T
C/3
C/A
G/C
G/T
A/T
4/-
A/2
A/G
A/G
T/C
-
A
-
-
-
G/T
G/A
A/-
T/-
6/-
C/T
C/T
T/C
A/-
C/2
G/T
G/T
T/C
T/-
C/T
T/-
A/G
G/A
C
A
T
C/A
A/T
C/T
T/C
A/G
A/-
T/C
G/-
C/T
2/-
G/A
T/-
-
5
C
A/2
A/G
T/C
G/2
2/-
G/-
G/A
A/G
T/3
4/-
C/T
A/G
A
2/-
A/-
A/-