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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 128,264 (bp)   Positions: 322
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.005
.841
.024
.003
.414
.002
.001
.001
.0
.0
.0
.0
.014
.003
.01
.001
.0
.0
.0
.008
.0
.001
.009
.515
.926
.024
.929
.001
.064
.0
.005
.001
.001
.029
.02
.983
.991
.0
.0
.015
.001
.002
.0
.006
.003
.013
.03
.002
.136
.501
.032
.0
.0
.011
.897
.001
--
--
.005
.009
.002
--
--
--
.004
.013
.0
.989
.316
.137
.187
.001
--
.004
.001
.925
.024
.002
.571
.031
.245
.036
.002
.017
.001
.016
.001
.263
.015
.005
.001
.006
.028
.309
.141
.001
.001
.194
.002
.001
.058
.215
.011
.759
.998
.997
.001
.01
.026
.029
--
--
.337
.02
.1
.055
.009
.009
.019
.0
.01
.003
.001
.0
.0
.0
.925
.0
.005
.006
.046
.003
.001
.0
.02
.0
.014
.001
.806
.02
.052
.001
.0
.002
.002
.016
.035
.226
.35
.002
.001
.125
.002
.013
.094
.005
.004
.005
.0
.037
.011
.993
.047
--
--
.455
--
.001
.001
.008
.003
.0
.0
.001
.002
--
.022
.023
.0
.004
.003
.077
.002
.005
.002
.023
.003
.006
.011
.013
.085
.0
.002
.0
.001
.004
.013
.0
.0
.549
.053
.006
.052
.006
.018
.008
.017
.013
.019
.001
.325
.001
.009
.317
.171
.132
.038
.006
.015
.0
.001
.001
.028
.976
.405
--
--
--
--
.809
.999
.187
.003
.977
.148
.018
.007
.002
.047
.009
.0
.121
.019
.001
.06
.0
.023
.002
.171
.004
.316
.082
.08
.852
.071
--
--
--
.411
.349
.001
.018
.074
.0
.003
.001
.0
.0
.001
.0
.001
--
.096
.016
.016
.0
.013
--
.009
.288
.015
.074
--
.001
.029
.0
.002
.001
.006
.01
.854
.002
.008
.001
.005
.001
.002
.997
.001
.002
.197
.012
.002
.002
.003
.085
.02
.003
.997
.964
.017
.367
.142
.68
.0
.002
.308
.292
.002
.0
.991
.01
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
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--
C
C
G
T
C
C
C
3
2
A
A
G
A
T
A
3
G
C
C
8
C
A
G
A
C
A
C
A
A
C
C
T
A
C
G
A
C
A
A
A
A
A
C
2
C
T
G
C
T
A
T
C
C
A
T
G
T
T
C
T
C
G
A
15
G
C
G
G
A
C
C
G
G
C
A
C
G
G
G
A
T
G
C
G
G
2
C
A
A
T
A
T
2
G
T
T
T
T
C
C
A
4
T
A
A
C
G
C
G
T
5
C
G
A
2
6
T
T
A
T
G
G
A
G
T
T
A
G
G
C
A
C
G
C
T
C
T
A
A
T
G
G
G
A
A
A
C
T
A
T
A
T
A
T
A
G
G
T
G
A
A
T
T
G
2
T
42
A
T
C
C
3
C
C
T
C
T
10
C
G
A
A
G
T
C
C
C
C
T
T
C
G
G
A
4
A
A
G
G
T
A
C
T
G
G
A
A
G
G
G
T
G
C
A
G
G
A
A
G
T
A
A
C
A
T
G
A
G
T
T
T
G
T
T
T
G
C
T
A
5
A
C
T
6
4
A
C
T
5
C
A
2
G
C
16
A
G
A
A
A
T
A
T
G
C
G
A
C
A
A
T
A
2
A
C
A
C
A
C
T
T
C
A
C
G
8
A
A
A
A
6
C
C
T
T
T
G
C
G
G
C
5
C
G
A
T
G
14
A
G
G
A
A
C
A
T
4
C
A
A
A
C
  48,073,543
  48,073,610
  48,074,950
  48,075,285
  48,075,372
  48,075,398
  48,075,501
  48,075,572
  48,075,602
  48,075,607
  48,075,610
  48,075,613
  48,075,853
  48,076,028
  48,076,286
  48,076,539
  48,076,544
  48,076,545
  48,076,546
  48,076,550
  48,076,969
  48,077,671
  48,077,852
  48,078,814
  48,078,967
  48,079,021
  48,079,107
  48,080,269
  48,080,703
  48,080,971
  48,081,102
  48,081,471
  48,081,473
  48,081,480
  48,082,451
  48,082,935
  48,083,050
  48,083,081
  48,083,198
  48,083,467
  48,083,948
  48,084,024
  48,084,148
  48,084,293
  48,084,310
  48,084,892
  48,085,088
  48,085,101
  48,085,198
  48,085,297
  48,085,631
  48,085,738
  48,085,740
  48,085,833
  48,086,700
  48,087,294
  48,087,578
  48,087,751
  48,087,975
  48,088,039
  48,088,158
  48,089,040
  48,089,524
  48,089,529
  48,089,550
  48,089,846
  48,090,088
  48,090,307
  48,090,694
  48,090,779
  48,091,069
  48,092,080
  48,092,821
  48,093,297
  48,093,442
  48,093,884
  48,095,960
  48,096,030
  48,096,064
  48,096,215
  48,096,406
  48,096,430
  48,096,527
  48,096,549
  48,096,625
  48,096,761
  48,096,835
  48,096,876
  48,097,004
  48,097,038
  48,097,177
  48,097,861
  48,097,920
  48,097,988
  48,098,481
  48,099,659
  48,099,875
  48,100,311
  48,100,703
  48,100,799
  48,101,062
  48,101,089
  48,102,141
  48,102,150
  48,102,210
  48,102,257
  48,103,001
  48,103,327
  48,103,903
  48,103,946
  48,104,520
  48,104,672
  48,106,469
  48,106,552
  48,106,598
  48,106,602
  48,106,693
  48,106,694
  48,106,786
  48,107,159
  48,107,179
  48,107,191
  48,107,297
  48,107,375
  48,107,381
  48,107,426
  48,107,972
  48,108,639
  48,108,926
  48,109,122
  48,109,416
  48,109,441
  48,109,472
  48,109,522
  48,109,592
  48,109,891
  48,109,895
  48,109,900
  48,109,992
  48,110,069
  48,110,236
  48,110,669
  48,110,730
  48,110,766
  48,110,767
  48,110,970
  48,110,978
  48,111,048
  48,111,652
  48,112,302
  48,112,517
  48,112,669
  48,113,163
  48,113,696
  48,113,807
  48,114,825
  48,114,829
  48,114,907
  48,115,265
  48,115,504
  48,115,645
  48,115,768
  48,115,877
  48,116,295
  48,116,565
  48,116,870
  48,117,669
  48,117,726
  48,117,729
  48,117,990
  48,118,170
  48,118,328
  48,119,029
  48,120,052
  48,120,294
  48,122,174
  48,122,585
  48,123,003
  48,123,476
  48,123,894
  48,123,899
  48,126,433
  48,126,595
  48,127,624
  48,127,797
  48,128,545
  48,128,561
  48,128,562
  48,128,568
  48,128,905
  48,130,014
  48,130,612
  48,130,640
  48,130,906
  48,130,979
  48,132,753
  48,132,767
  48,132,852
  48,132,974
  48,134,035
  48,137,764
  48,137,796
  48,137,837
  48,137,894
  48,137,896
  48,138,194
  48,138,231
  48,138,612
  48,138,700
  48,138,956
  48,139,433
  48,143,712
  48,144,066
  48,144,203
  48,144,257
  48,145,959
  48,146,297
  48,146,305
  48,146,490
  48,147,077
  48,147,100
  48,147,399
  48,148,770
  48,149,570
  48,149,737
  48,149,909
  48,149,956
  48,150,021
  48,150,312
  48,150,506
  48,150,838
  48,151,030
  48,151,295
  48,151,774
  48,151,822
  48,151,920
  48,151,992
  48,152,794
  48,153,416
  48,153,960
  48,154,787
  48,154,821
  48,155,813
  48,156,450
  48,156,473
  48,157,079
  48,157,481
  48,157,513
  48,158,211
  48,158,368
  48,158,912
  48,160,497
  48,160,499
  48,161,217
  48,161,403
  48,161,484
  48,161,499
  48,161,504
  48,161,564
  48,161,570
  48,162,107
  48,162,573
  48,162,758
  48,164,256
  48,164,362
  48,164,407
  48,166,840
  48,167,606
  48,168,633
  48,169,111
  48,169,517
  48,171,483
  48,172,667
  48,175,191
  48,175,192
  48,175,217
  48,175,630
  48,176,270
  48,176,556
  48,177,072
  48,177,232
  48,177,977
  48,178,363
  48,179,467
  48,179,598
  48,180,619
  48,180,633
  48,180,637
  48,180,639
  48,180,641
  48,181,002
  48,181,477
  48,182,352
  48,182,673
  48,183,236
  48,184,040
  48,184,368
  48,184,516
  48,185,791
  48,188,177
  48,189,032
  48,189,037
  48,189,042
  48,189,043
  48,189,412
  48,190,682
  48,191,497
  48,192,491
  48,192,849
  48,192,872
  48,193,999
  48,194,074
  48,194,149
  48,194,184
  48,194,438
  48,195,147
  48,197,626
  48,197,648
  48,197,969
  48,198,586
  48,201,270
  48,201,332
T
A
-
C
T
A
T
-
-
C
G
T
G
A
G
-
A
4
T
-
-
G
C
C
T
G
T
G
G
T
4
C
G
G
2
T
A
2
G
G
C
G
25
-
T
G
T
T
C
-
C
A
T
T
C
T
C
2
T
A
T
8
-
-
8
T
A
T
G
G
G
A
A
T
3
2
2
A
T
G
G
A
T
A
A
-
T
C
G
C
G
C
-
C
2
A
61
A
T
T
A/3
-
2
G
2
T
C
T
A
C
5/-
T
C
-
-
-
C
G
-
-
T
T
C
C
C
3
2
A
C
T
G
T
T
A
C
2
C
G
-
C
A
A
C
4
G
G
15
C
-
C
G
C
G
2
G
T
T
-
T
83
G
G
A
T
-
-
-
G
C
T
T
-
T
A
-
5/9
G
-
G
A
T
T
A
C
T
2
-
T
2
G
3
C
T
T
-
G
G
A
A
C
-
A
-
-
-
27
C
T
A
A
3
C
T
C
5
A
-
C
A
6
C
C
G
9
A
A
T
2
C
2
9
T
C
C
C
-
T
C
-
-
2
2
C
-
-
G
2
G
-
T
15
-
T
G
-
-
-
2
T
T
A
5
C
A
C/9
G/10
T
T
G
T
C
C
-
C
A
T
A
T
T
C
A
2
-
T
-
-
6
-
G
2
6/-
T
T
-
C
C
A
T
A
A
T
-
5
C
2
C
2
-
G
-
2
2
G
2
G
3
-
T
G
-
-
2