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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 128,264 (bp)   Positions: 245
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.024
.003
.414
.002
.001
.0
.0
.0
.014
.003
.01
.001
.0
.008
.0
.01
.005
.982
.024
.929
.069
.001
.941
.002
.002
.02
.983
.991
.0
.001
.002
.004
.0
.001
.003
.013
.03
.002
.571
.0
.0
.0
.013
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.009
.005
.056
.002
--
--
--
--
--
.995
.137
.054
.004
.0
.008
.004
.001
.505
.925
.001
.0
.024
.571
.031
.245
.036
.002
.017
.001
.016
.001
.263
.001
.006
.028
.141
.042
.001
.215
.011
.019
.001
.01
.026
.029
--
--
--
--
.185
.02
.146
.1
.0
.005
.0
.002
.014
.009
.002
--
.455
.02
.02
.003
.002
.0
.008
.0
.0
--
.001
.005
--
--
--
.022
.044
.0
.0
.077
.005
.002
.023
.003
.011
.013
.044
.085
.0
.002
.0
.001
.027
.995
.0
.001
.004
.013
.053
.006
.052
.006
.018
.028
.017
.017
.001
.03
.325
.998
.007
.0
.044
.009
.012
.031
.001
.038
.026
.006
.004
.0
.976
--
.002
.047
.005
.121
.061
.003
.167
.082
.082
.067
.798
--
--
--
--
.001
.001
.0
.012
.069
.239
.349
.488
.0
.013
--
.009
.288
.022
.066
--
.093
.029
.0
.009
.002
.001
.01
.008
.005
.043
.771
.002
.003
.123
.085
.02
.003
.964
.042
.0
.002
.308
.292
.002
.0
.998
.172
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
Col8a1
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--
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--
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--
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--
--
--
G
T
C
C
C
2
A
G
A
T
A
3
C
8
2
C
T
C
A
C
4
A
C
C
A
G
A
C
A
A
A
2
C
2
T
T
G
C
T
C
C
C
2
G
A
T
T
T
G
T
C
C
C
C
C
C
C
C
T
C
G
T
C
C
C
C
G
2
G
A
6
G
C
G
C
G
A
G
A
G
C
G
G
G
G
A
T
G
C
G
G
2
C
A
A
T
2
T
G
C
4
T
A
G
C
G
T
G
C
C
C
T
A
T
2
T
G
C
A
C
T
T
T
T
A
A
G
A
G
C
3
C
A
C
A
C
4
G
T
6
C
C
A
T
C
C
C
T
T
G
C
G
G
A
4
4
T
4
4
A
A
A
C
T
G
G
T
A
A
G
A
T
C
3
G
A
A
A
C
G
A
A
A
G
C
A
G
T
A
T
C
2
G
A
2
G
G
T
A
A
G
A
T
A
C
C
2
A
G
C
A
C
A
C
T
A
A
A
T
G
8
2
A
A
A
C
2
G
T
G
A
A
T
G
8
G
G
A
T
4
C
A
A
2
A
  48,074,950
  48,075,285
  48,075,372
  48,075,398
  48,075,501
  48,075,602
  48,075,610
  48,075,613
  48,075,853
  48,076,028
  48,076,286
  48,076,539
  48,076,545
  48,076,550
  48,076,968
  48,077,128
  48,078,363
  48,078,863
  48,079,021
  48,079,107
  48,079,593
  48,080,269
  48,080,511
  48,081,633
  48,081,702
  48,082,451
  48,082,935
  48,083,050
  48,083,081
  48,083,948
  48,084,024
  48,084,141
  48,084,148
  48,084,153
  48,084,312
  48,084,892
  48,085,088
  48,085,101
  48,085,309
  48,085,721
  48,085,738
  48,085,740
  48,086,851
  48,087,294
  48,087,557
  48,087,560
  48,087,566
  48,087,578
  48,087,579
  48,087,623
  48,087,663
  48,087,669
  48,087,675
  48,087,699
  48,087,705
  48,087,711
  48,087,717
  48,087,723
  48,087,733
  48,087,745
  48,087,749
  48,087,751
  48,087,886
  48,087,975
  48,088,115
  48,088,158
  48,089,040
  48,089,504
  48,089,516
  48,089,524
  48,089,529
  48,090,184
  48,090,779
  48,091,879
  48,093,297
  48,093,326
  48,093,414
  48,093,418
  48,093,442
  48,093,667
  48,093,884
  48,094,490
  48,095,396
  48,095,960
  48,096,064
  48,096,215
  48,096,406
  48,096,430
  48,096,527
  48,096,549
  48,096,625
  48,096,761
  48,096,835
  48,096,876
  48,097,177
  48,097,861
  48,097,920
  48,098,481
  48,099,209
  48,099,733
  48,101,089
  48,102,141
  48,102,469
  48,103,001
  48,103,327
  48,103,903
  48,103,946
  48,104,226
  48,104,502
  48,104,520
  48,104,672
  48,106,134
  48,106,552
  48,106,590
  48,106,598
  48,107,426
  48,108,926
  48,109,891
  48,110,759
  48,112,322
  48,114,821
  48,114,865
  48,116,558
  48,116,870
  48,117,196
  48,117,935
  48,117,965
  48,117,971
  48,117,977
  48,117,990
  48,118,328
  48,119,029
  48,119,193
  48,120,052
  48,120,349
  48,122,174
  48,122,327
  48,122,348
  48,122,585
  48,123,007
  48,123,476
  48,126,128
  48,126,433
  48,127,624
  48,127,797
  48,128,545
  48,128,561
  48,128,568
  48,128,905
  48,129,879
  48,130,014
  48,130,612
  48,130,640
  48,130,906
  48,130,979
  48,131,310
  48,132,376
  48,132,655
  48,132,663
  48,132,753
  48,132,767
  48,137,764
  48,137,796
  48,137,837
  48,137,894
  48,137,896
  48,138,149
  48,138,231
  48,138,353
  48,138,565
  48,139,283
  48,139,433
  48,140,532
  48,141,015
  48,141,698
  48,143,340
  48,145,293
  48,145,441
  48,145,726
  48,146,108
  48,146,297
  48,146,300
  48,146,305
  48,146,916
  48,148,148
  48,149,570
  48,150,021
  48,152,794
  48,153,416
  48,153,948
  48,154,821
  48,156,475
  48,157,708
  48,158,215
  48,160,497
  48,160,498
  48,160,513
  48,161,180
  48,161,484
  48,161,496
  48,161,499
  48,161,504
  48,162,212
  48,164,405
  48,167,606
  48,168,076
  48,172,661
  48,173,462
  48,174,908
  48,174,912
  48,175,217
  48,175,630
  48,176,270
  48,176,556
  48,177,072
  48,177,921
  48,177,978
  48,178,363
  48,179,099
  48,179,598
  48,180,619
  48,180,632
  48,180,633
  48,180,637
  48,180,641
  48,182,352
  48,183,235
  48,184,097
  48,184,806
  48,189,043
  48,189,412
  48,190,556
  48,190,682
  48,191,497
  48,192,491
  48,192,872
  48,193,507
  48,194,438
  48,195,147
  48,197,626
  48,197,648
  48,197,969
  48,198,586
  48,201,269
  48,201,333
-
C
T
A
T
-
G
T
G
A
G
-
4
-
-
T
C
T
G
T
-
G
2
T
T
2
T
A
2
C
G
2/-
C/T
2/-
?
G
T
T
C
T
A
T
-
T
T
C
A
C
A
2
C/T
C/T
C/T
C/T
C/T
C/T
C/T
C/T
T/C
C/T
3/3
2
T
T
T
T
9
-
-
-
-
A
G
A
T
A
G
A
3/7
A
2
A
T
2
T
G
G
A
T
A
A
-
T
C
G
C
-
2
A
T
-
2
G
C
T
A
C
A
C/T
C/G
C/T
C
-
3
-
T/2
C
2
-
T
T/G
-
T/3
-
G
G
C
G
A
T
-
T
A/T
A
G
5
4/-
G/A
G
-
G
T
T
C
T
2
-
2
G
A
3
C
T
T
-
-
C
-
-
G
G
-
A
-
-
-
C
C
C
A
G
3
T
-
A
-
G
G
A
A
A/-
T
C
A
T
9
3/GC
C
-
2
2
-
T
-
2/-
G/-
T
C
-
T
-
2
-
A/G
T
2
-
G
A
5
T
A
T
T
C
G
-
-
C
-
-
-
6
2
-
T
-
A
-
-
2
G
C
2
-
-
A
G
3
-
C/T
G
A/-
-
-