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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 83,139 (bp)   Positions: 502
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.0
.002
.022
.001
.0
.0
.001
.011
.0
.036
.004
.007
.0
.0
.0
.006
.006
.212
.0
.476
.17
.163
.101
.001
.009
.007
.023
.011
.402
.017
.0
.0
.014
.003
.002
.003
.057
.055
.005
.169
.002
.0
.001
.001
.005
.214
.218
.0
.093
.054
.018
.007
--
--
--
--
--
--
.073
.08
.053
.002
.002
.002
.003
.004
.023
.109
.115
.22
.121
.005
.001
.231
.337
.742
.742
.745
.167
.073
.142
.188
.009
.547
.009
.002
.012
.002
.002
.002
.002
.006
.004
.002
.001
.566
.034
.02
.009
.007
.039
.024
.037
.032
.05
.021
.043
.014
.153
.075
.274
.39
.293
.261
.163
.189
.25
.174
.046
.009
.017
.039
.001
.077
.04
.0
.0
.059
.26
.561
.417
.088
.146
.004
.081
.102
.165
.393
.324
.295
.207
.092
.438
.512
.081
.042
.011
.003
.373
.145
.109
.086
.096
.662
.182
.198
.889
.941
.965
.02
.061
.402
.211
.083
.01
.017
.018
.046
.013
.001
.0
.0
.001
.001
.001
.002
.005
.001
.001
.003
.003
.001
.0
.003
.0
.0
.093
.017
.0
.002
.027
.167
.159
.112
.096
.136
.081
.08
.071
.031
.005
.017
.108
.008
.013
--
--
.008
.018
.071
.301
.543
.747
.688
.045
.083
.095
.141
.059
.06
.012
.017
.018
.005
.007
.136
.989
.992
1.0
.003
.004
.019
.029
.011
.033
.07
.004
1.0
.005
.096
.493
.314
.11
.012
.063
.092
.088
.054
.009
.556
.042
.048
--
.012
.015
.0
.0
.055
.143
.07
.006
.021
.044
.066
.155
.013
.034
.02
.086
.301
.018
.012
.228
.228
.307
.005
.01
.02
.003
.005
.027
.033
.001
.009
.012
.02
.11
.126
.019
.013
.079
.013
.057
.027
.036
.033
.067
.244
.018
.037
.061
.06
.263
.261
.289
.375
.034
.487
.004
.024
.001
.001
.03
.034
.001
.095
.001
.001
.069
.003
.005
.007
.003
.076
.002
.002
.054
.014
.015
.0
.0
.0
.0
.001
.004
.007
.058
.004
.131
.01
.003
.475
.0
.012
.004
.013
.0
.165
.247
.004
.015
.002
.044
.015
.011
.017
.031
.039
.002
.023
.001
.016
.104
.084
.028
.008
.001
.002
.019
.04
.001
.013
.082
.002
--
--
--
--
--
--
--
--
--
--
.093
.033
.027
.01
.005
.01
.012
.008
.002
.008
.016
.002
--
.011
.001
.001
.002
.0
.011
.997
1.0
.001
.001
.001
.004
.003
.187
.169
--
--
.03
.054
.0
.655
.116
.039
.16
.048
.125
.045
.029
.166
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.032
.069
.126
.023
.024
.032
.001
.995
.179
.049
.975
1.0
.0
.009
.208
.013
.001
.407
.127
.122
--
--
.008
.238
.24
.062
.173
.176
.003
.01
.0
.003
.0
.001
.002
.0
.0
.064
.004
--
.001
.008
.037
.017
.006
.0
.046
.02
.016
.015
.0
.0
.005
.011
.001
.0
--
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Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
Abcb1b
C
A
C
A
C
G
A
T
T
G
T
G
C
G
A
C
A
A
G
A
G
G
T
A
A
T
A
C
T
C
G
G
A
G
G
T
A
C
G
G
G
C
A
G
T
A
G
C
C
T
C
C
C
C
G
C
T
T
A
C
G
T
G
C
G
C
G
C
A
C
C
C
A
2
G
T
G
T
G
A
G
C
A
G
4
C
C
T
C
C
A
C
A
A
T
T
C
C
G
G
G
T
T
A
T
T
G
T
G
T
T
A
T
G
A
T
G
G
G
A
G
T
C
G
T
G
A
C
T
C
C
8
C
G
T
A
A
T
G
C
T
A
A
A
A
C
T
A
G
T
2
A
C
T
C
T
T
T
T
A
A
G
C
A
T
A
T
G
C
G
C
A
A
A
G
C
A
G
C
A
C
C
G
G
G
A
A
A
G
T
T
G
G
5
5
C
G
C
T
A
C
C
A
C
A
2
2
G
C
T
A
T
G
G
A
A
A
G
T
C
C
G
C
A
T
G
T
G
T
C
G
T
T
G
A
T
T
G
G
G
T
C
T
C
A
2
G
G
T
C
G
C
A
T
C
G
G
G
T
T
C
G
T
T
C
T
T
T
C
22
G
A
C
A
A
C
C
A
T
C
T
T
G
A
C
A
C
C
G
G
T
C
C
T
T
C
T
C
4
4
A
A
G
G
T
T
G
T
G
G
C
2
A
A
T
T
G
T
G
A
T
T
G
T
G
C
T
C
A
A
G
G
A
C
C
A
A
A
T
A
C
C
G
C
C
A
G
T
A
T
A
A
T
C
G
T
C
C
T
C
C
C
A
T
A
T
G
C
G
G
G
A
C
T
T
A
C
A
A
A
C
A
G
A
T
G
A
A
G
A
A
C
C
A
C
A
C
T
T
A
G
T
A
G
A
A
G
C
T
G
A
T
C
C
A
G
A
A
G
C
T
T
T
G
C
A
C
G
T
G
C
G
A
G
C
C
C
C
C
A
2
G
A
G
T
3
G
2
A
C
T
T
T
T
G
A
C
G
C
A
C
A
C
C
T
T
T
A
A
G
C
C
A
T
C
T
G
T
T
C
C
T
A
C
C
G
C
C
A
G
A
C
G
C
A
22
C
G
A
G
T
A
  22,164,205
  22,164,614
  22,165,228
  22,165,239
  22,165,245
  22,165,247
  22,166,062
  22,166,493
  22,166,503
  22,166,574
  22,166,590
  22,166,801
  22,166,851
  22,166,863
  22,166,954
  22,166,960
  22,166,961
  22,166,968
  22,167,045
  22,167,159
  22,167,236
  22,167,238
  22,167,244
  22,167,271
  22,167,280
  22,167,284
  22,167,307
  22,167,317
  22,167,393
  22,167,413
  22,167,486
  22,167,489
  22,167,568
  22,167,775
  22,167,936
  22,167,987
  22,168,053
  22,168,116
  22,168,139
  22,168,203
  22,168,239
  22,168,356
  22,168,378
  22,168,405
  22,168,484
  22,168,492
  22,168,493
  22,168,676
  22,168,742
  22,168,988
  22,168,997
  22,169,013
  22,169,384
  22,169,395
  22,169,527
  22,169,727
  22,169,828
  22,169,901
  22,170,114
  22,170,117
  22,170,141
  22,170,174
  22,170,178
  22,170,179
  22,170,185
  22,170,197
  22,170,208
  22,170,264
  22,170,267
  22,170,288
  22,170,677
  22,170,692
  22,170,716
  22,170,728
  22,170,730
  22,170,786
  22,170,787
  22,170,790
  22,170,848
  22,170,853
  22,170,866
  22,170,878
  22,170,935
  22,170,944
  22,171,006
  22,171,016
  22,171,075
  22,171,092
  22,171,120
  22,171,184
  22,171,225
  22,171,248
  22,171,262
  22,171,267
  22,171,312
  22,171,358
  22,171,450
  22,171,455
  22,171,461
  22,171,516
  22,171,541
  22,171,563
  22,171,584
  22,171,585
  22,171,591
  22,171,623
  22,171,624
  22,171,645
  22,171,679
  22,171,719
  22,171,733
  22,171,738
  22,171,766
  22,171,772
  22,171,849
  22,171,851
  22,171,863
  22,171,891
  22,171,937
  22,171,949
  22,171,996
  22,172,023
  22,172,040
  22,172,062
  22,172,072
  22,172,263
  22,172,270
  22,172,317
  22,172,332
  22,172,369
  22,172,427
  22,172,443
  22,172,503
  22,172,536
  22,172,556
  22,172,570
  22,172,596
  22,172,615
  22,172,633
  22,172,641
  22,172,664
  22,172,721
  22,172,826
  22,172,838
  22,172,862
  22,172,880
  22,172,939
  22,172,943
  22,173,155
  22,173,179
  22,173,182
  22,173,208
  22,173,214
  22,173,385
  22,173,402
  22,173,406
  22,173,432
  22,173,453
  22,173,458
  22,173,485
  22,173,515
  22,173,578
  22,173,587
  22,173,739
  22,173,754
  22,173,800
  22,173,814
  22,173,943
  22,173,994
  22,174,017
  22,174,060
  22,174,061
  22,174,091
  22,174,095
  22,174,109
  22,174,111
  22,174,155
  22,174,158
  22,174,161
  22,174,171
  22,174,179
  22,174,194
  22,174,289
  22,174,399
  22,174,403
  22,174,420
  22,174,674
  22,174,729
  22,174,746
  22,174,747
  22,174,762
  22,174,828
  22,174,831
  22,174,853
  22,174,860
  22,174,914
  22,174,916
  22,174,917
  22,174,920
  22,174,952
  22,174,966
  22,174,971
  22,174,989
  22,175,002
  22,175,007
  22,175,033
  22,175,038
  22,175,094
  22,175,104
  22,175,121
  22,175,171
  22,175,240
  22,175,261
  22,175,282
  22,175,314
  22,175,334
  22,175,336
  22,175,501
  22,175,563
  22,175,564
  22,175,587
  22,175,590
  22,175,604
  22,175,620
  22,175,649
  22,175,891
  22,176,490
  22,176,491
  22,176,506
  22,176,882
  22,176,888
  22,177,215
  22,177,444
  22,177,573
  22,178,020
  22,178,075
  22,178,516
  22,178,573
  22,178,930
  22,179,042
  22,179,444
  22,179,595
  22,181,568
  22,181,642
  22,182,034
  22,182,044
  22,182,052
  22,182,065
  22,182,084
  22,182,210
  22,182,379
  22,183,043
  22,183,168
  22,183,868
  22,184,009
  22,184,348
  22,184,377
  22,184,556
  22,185,089
  22,185,114
  22,185,154
  22,185,175
  22,185,197
  22,185,219
  22,185,262
  22,185,407
  22,185,426
  22,185,631
  22,185,711
  22,185,781
  22,185,837
  22,185,859
  22,185,945
  22,185,946
  22,185,958
  22,186,021
  22,186,128
  22,186,129
  22,186,174
  22,186,203
  22,186,255
  22,186,296
  22,186,448
  22,186,457
  22,186,459
  22,186,504
  22,186,522
  22,186,556
  22,186,587
  22,186,600
  22,186,622
  22,186,649
  22,186,823
  22,186,839
  22,186,860
  22,186,861
  22,186,890
  22,186,996
  22,187,064
  22,187,069
  22,187,191
  22,187,248
  22,187,380
  22,187,415
  22,187,422
  22,187,602
  22,187,912
  22,187,980
  22,188,114
  22,188,218
  22,188,284
  22,188,354
  22,188,372
  22,188,472
  22,188,698
  22,188,765
  22,189,249
  22,189,464
  22,189,644
  22,189,664
  22,189,705
  22,189,772
  22,190,205
  22,190,253
  22,190,275
  22,190,411
  22,190,449
  22,190,595
  22,190,807
  22,191,427
  22,191,633
  22,198,497
  22,198,546
  22,198,614
  22,198,880
  22,199,163
  22,199,167
  22,199,368
  22,199,377
  22,199,411
  22,199,455
  22,199,522
  22,199,575
  22,199,710
  22,199,722
  22,199,763
  22,199,863
  22,199,988
  22,200,005
  22,200,431
  22,200,519
  22,200,771
  22,200,878
  22,200,924
  22,200,925
  22,201,098
  22,201,181
  22,201,187
  22,201,217
  22,201,230
  22,201,323
  22,201,360
  22,201,531
  22,201,556
  22,202,235
  22,202,247
  22,202,440
  22,202,906
  22,203,078
  22,203,377
  22,203,412
  22,203,549
  22,204,172
  22,205,255
  22,205,676
  22,205,851
  22,206,646
  22,207,014
  22,208,415
  22,208,754
  22,209,207
  22,209,552
  22,211,132
  22,211,489
  22,212,288
  22,212,292
  22,212,293
  22,212,300
  22,212,304
  22,212,315
  22,212,381
  22,212,387
  22,213,145
  22,213,161
  22,213,201
  22,213,408
  22,213,862
  22,214,375
  22,214,555
  22,214,556
  22,215,343
  22,216,339
  22,216,434
  22,216,677
  22,217,203
  22,217,607
  22,217,668
  22,217,688
  22,217,743
  22,218,558
  22,218,644
  22,218,645
  22,218,860
  22,218,862
  22,219,596
  22,223,453
  22,223,881
  22,223,968
  22,224,318
  22,224,791
  22,224,815
  22,224,893
  22,224,958
  22,224,999
  22,225,023
  22,225,231
  22,225,809
  22,225,812
  22,225,922
  22,225,956
  22,226,010
  22,226,013
  22,226,016
  22,226,041
  22,226,067
  22,226,077
  22,226,113
  22,226,150
  22,226,154
  22,226,186
  22,226,474
  22,226,618
  22,226,739
  22,227,549
  22,227,619
  22,227,631
  22,230,088
  22,230,143
  22,230,380
  22,230,702
  22,231,164
  22,231,470
  22,231,819
  22,232,132
  22,232,912
  22,232,961
  22,234,052
  22,234,232
  22,234,319
  22,234,860
  22,234,886
  22,235,002
  22,235,288
  22,236,198
  22,236,799
  22,236,802
  22,238,401
  22,238,498
  22,239,176
  22,239,253
  22,239,269
  22,239,305
  22,239,332
  22,239,404
  22,239,507
  22,239,613
  22,240,128
  22,240,182
  22,240,215
  22,240,216
  22,240,384
  22,240,489
  22,240,500
  22,240,580
  22,241,059
  22,241,666
  22,241,953
  22,241,987
  22,242,059
  22,243,092
  22,243,432
  22,243,506
  22,244,136
  22,244,167
  22,244,179
  22,244,275
  22,244,313
  22,244,314
  22,244,599
  22,244,613
  22,244,675
  22,244,691
C/-
G
T
G
T
A
G
G
C
A
G
T
T
T
A/T
T
G
G
A
A/T
A
A
4
5
G
A
G
T
G
-
T
C
-
A
A
C
G
A
A
A
T
A
T
T
G
C
A
T
T
C
T
T
C/T
T
A
T
C
G
G
T
A
A
T
T
2
A
A
C/T
A/G
T
G
T
G
-
3
C
A
A
A
T
A
C/T
T
C
-
T
T
A
A
T
2
T
G
G
C
C
T
T
A
A
A
C
G
G
C
T/C
G/A
C
C
C
C
G
C
A
C
A
A
A
A
C
A
G
T
A
C
T
G
T
C
T
G
-
T
A
2
A/C
2
G
A
2
G
T
G
G
G
T
C
G
A
-
-
G
G
C
T
A
T/C
2
67
G
G
T
T
7
G
G
2
T
T
T
C/T
A/G
G
2
-
T
2
2
T
T
T
T
A
A
A
G
T
G
C
G
C
A
T
-
5/-
-
T
A
4
G
T
T
T
T
G
-
-
G/C
G
2
C
15
A
C
G
G
C
C
T/C
C/T
T
A
T
G
G
A
C
A
C
T
A
A
T/C
C
A/G
A
C
A
G/A
T
-
C/T
C
G
C
-
T
A
C
T
A
A
C
C
C/G
A
A
A
C
C
G
A
C
2
T
C
C
-
C/T
-
T
G
C/T
A/G
4
T
T
G
C
T
C
C
T
G
A
A/5
T
T
-
A
C
T
G
G
T/C
C/T
C
T
-
-
G
G
A
C
C
C
A
C
A
A
T
-
G
G
A
A
T
C
2
-
2
G
T
G
A
T
G
T
-
C
C
A
C
T
8
G
2
A/G
C
C
T
T
A
3
A
C
C
G
C
G
G
T
C
T
T
C
T
-
C
T
T
A
G
C
G
C
A
21
3
A
C
G
T
C
T/G
G
C/G
C
G
G
2
G
G/2
A/G
-
A
G
T
T
T
2
C/-
A
-
T
A/T
G
C
T/C
G
A
C
3
A
G
G
T
A
A
2
C
C
T
T
G
C
G
T
A
T
T/2
G
C
A
T
C
T
T
G
A
T
T
G
A
T
T
C/G
A
T
G
2/-
A
T
A
A
-
A
-
T
3
C
C
C
C
A
G
A
G/A
T
-
T
2
T
G
C
C
C
T
G
A
A
G
5
C
A
G
2
C
C
A
C/G
G
C
T
5
A
T
T
2
G/-
T
T
C
C/G
T
22/-
C/2
G/C
2
A
A
-