chr start stop reference nuc variant nuc depth genic status zygosity variant ID X 55470065 55470066 T TTTAGAGCTCTGTACCTGCAGCTAGGAG 4 INTERGENIC homozygous 45509003 X 55477503 55477505 TG -- 6 INTERGENIC heterozygous 45136314 X 55477918 55477920 TG -- 3 INTERGENIC heterozygous 45668350 X 55480869 55480873 GAGA ---- 1 INTERGENIC homozygous 45509005 X 55485645 55485646 C CTCTTCT 6 INTERGENIC homozygous 45136315 X 55485895 55485897 AT -- 13 INTERGENIC homozygous 45136316 X 55486908 55486909 G C 2 INTERGENIC homozygous 45477968 X 55489543 55489544 G - 8 INTERGENIC heterozygous 45136326 X 55504796 55504798 AC -- 6 INTERGENIC heterozygous 45546634 X 55523736 55523737 C CAG 16 INTERGENIC heterozygous 45648970 X 55523738 55523740 CC -- 18 INTERGENIC heterozygous 45648972 X 55527035 55527036 A AG 10 INTERGENIC heterozygous 45797128 X 55589100 55589102 GG -- 14 INTERGENIC heterozygous 45648981 X 55589104 55589105 A AAC 15 INTERGENIC heterozygous 45648983 X 55599428 55599429 T TAATAAAAAAAAAGATAAAAAA 1 INTERGENIC homozygous 45618332 X 55608731 55608733 TG -- 4 INTERGENIC heterozygous 45509013 X 55610969 55610970 T C 13 INTERGENIC homozygous 45136348 X 55620845 55620846 C CT 1 INTERGENIC homozygous 45136349 X 55637098 55637099 T - 1 GENIC homozygous 45136350 X 55649360 55649361 T TAGCC 8 GENIC homozygous 45136352 X 55651905 55651906 A - 6 GENIC heterozygous 45303073 X 55666827 55666828 T TTCTCTC 8 GENIC heterozygous 45717097 X 55671066 55671068 CA -- 6 GENIC heterozygous 45509017 X 55675352 55675354 GT -- 1 GENIC homozygous 45509019 X 55670668 55670669 T - 4 GENIC heterozygous 45694404 X 55632844 55632846 GT -- 3 GENIC heterozygous 45633046 X 55680486 55680487 C CAG 1 GENIC homozygous 45509021 X 55680736 55680737 G A 2 GENIC homozygous 45509023 X 55683574 55683578 CACA ---- 9 GENIC heterozygous 45633050 X 55683576 55683578 CA -- 9 GENIC heterozygous 45546641 X 55729283 55729284 C CA 1 INTERGENIC homozygous 45136363 X 55729286 55729287 T TC 1 INTERGENIC homozygous 45136364 X 55731845 55731846 A - 3 INTERGENIC heterozygous 45136365 X 55733366 55733372 CAACAA ------ 9 INTERGENIC heterozygous 45303135 X 55747677 55747681 CTCT ---- 3 INTERGENIC heterozygous 45255655 X 55747679 55747681 CT -- 3 INTERGENIC heterozygous 45255656 X 55749599 55749601 CA -- 8 INTERGENIC heterozygous 45509027 X 55752802 55752803 T - 5 INTERGENIC homozygous 45136366 X 55753504 55753505 G GTTTTTATTTATTTATTTTT 6 INTERGENIC heterozygous 45694417 X 55758695 55758696 C G 7 INTERGENIC heterozygous 45303174 X 55788721 55788722 T TTTG 9 INTERGENIC homozygous 45136370 X 55790724 55790725 C A 6 INTERGENIC homozygous 45324824 X 55794784 55794785 A - 9 INTERGENIC heterozygous 45694419 X 55794786 55794791 AACTT ----- 8 INTERGENIC heterozygous 45694421 X 55808228 55808229 G GT 6 INTERGENIC heterozygous 45303223 X 55819771 55819773 AC -- 10 INTERGENIC heterozygous 45509033 X 55820507 55820509 AC -- 3 INTERGENIC heterozygous 45255658 X 55851095 55851096 A AC 2 INTERGENIC homozygous 45136376 X 55876149 55876150 T - 3 INTERGENIC heterozygous 45509038 X 55881545 55881547 CT -- 1 INTERGENIC homozygous 45255661 X 55887304 55887305 T C 8 INTERGENIC homozygous 45136383 X 55889080 55889081 T TGTGC 8 INTERGENIC heterozygous 45803594 X 55890303 55890305 AC -- 5 INTERGENIC heterozygous 45509040 X 55892310 55892311 A - 9 INTERGENIC heterozygous 45136384 X 55897505 55897506 T C 17 GENIC homozygous 45136385 X 55906639 55906640 C CAT 6 INTERGENIC homozygous 45136387 X 55908492 55908494 GT -- 9 INTERGENIC heterozygous 45546649 X 55911973 55911974 G GAGGA 3 GENIC homozygous 45509042 X 55912038 55912039 G GGGAA 3 GENIC homozygous 45509044 X 55912856 55912857 A C 17 GENIC homozygous 45136389 X 55924898 55924899 A - 4 INTERGENIC heterozygous 45717099 X 55925754 55925756 AC -- 4 INTERGENIC heterozygous 45136390 X 55927152 55927153 G - 14 INTERGENIC homozygous 45136391 X 55927155 55927156 A T 14 INTERGENIC homozygous 45477975 X 55930490 55930491 G GT 7 INTERGENIC homozygous 45303275 X 55951293 55951297 GTGT ---- 4 GENIC heterozygous 45255663 X 55951295 55951297 GT -- 4 GENIC heterozygous 45136393 X 55955302 55955303 C CA 4 GENIC heterozygous 45324828 X 55958075 55958077 TG -- 7 GENIC heterozygous 45342247 X 55976011 55976012 A C 13 GENIC homozygous 45136399 X 55976012 55976013 A T 13 GENIC homozygous 45136400 X 55976037 55976038 G A 11 GENIC homozygous 45136401 X 55982459 55982460 T TC 8 GENIC homozygous 45136402 X 55989423 55989424 G GA 8 GENIC homozygous 45509056 X 55989426 55989427 C A 8 GENIC homozygous 45509058 X 55997518 55997520 AT -- 1 GENIC homozygous 45324829 X 55999475 55999479 ACAG ---- 2 GENIC homozygous 45509060 X 56061017 56061018 T - 5 GENIC homozygous 45136411 X 56061038 56061039 C - 3 GENIC homozygous 45136412 X 56062970 56062971 A - 3 GENIC heterozygous 45303281 X 56066109 56066110 T C 13 GENIC homozygous 45136414 X 56066130 56066131 T C 11 GENIC homozygous 45136415 X 56066131 56066132 G A 11 GENIC homozygous 45136416 X 56067406 56067407 G - 8 GENIC heterozygous 45324831 X 56091104 56091105 C T 4 GENIC homozygous 45136417 X 56094134 56094168 CATCAATCCCTCACAGACAAAATGACCAGCAGAC ---------------------------------- 8 GENIC homozygous 45509065 X 56094171 56094172 G GC 3 GENIC homozygous 45509067 X 56094172 56094173 A T 3 GENIC homozygous 45509069 X 56094177 56094178 C - 2 GENIC homozygous 45509071 X 56094180 56094181 A AG 2 GENIC homozygous 45546658 X 56094184 56094187 TGC --- 2 GENIC homozygous 45546660 X 56102981 56102985 CTTT ---- 1 INTERGENIC homozygous 45509073 X 56106405 56106407 AG -- 10 INTERGENIC heterozygous 45136425 X 56108739 56108740 G GA 5 INTERGENIC heterozygous 45136426 X 56108739 56108740 G GAA 5 INTERGENIC heterozygous 45509077 X 56110589 56110590 T - 9 INTERGENIC heterozygous 45569069 X 56110591 56110592 T TG 9 INTERGENIC heterozygous 45569071 X 56113046 56113050 TAGC ---- 9 INTERGENIC heterozygous 45509081 X 56113051 56113052 A AT 10 INTERGENIC heterozygous 45509084 X 56115264 56115265 C CAG 11 INTERGENIC heterozygous 45803596 X 56115266 56115267 C CTGAGCCAT 10 INTERGENIC heterozygous 45803598 X 56115290 56115306 GCCCCATCAAGGAGCC ---------------- 13 INTERGENIC heterozygous 45546677 X 56115361 56115363 AC -- 13 INTERGENIC heterozygous 45509086 X 56125486 56125487 T - 11 INTERGENIC heterozygous 45477981 X 56127581 56127582 T C 10 INTERGENIC homozygous 45136430 X 56131063 56131064 G - 12 INTERGENIC heterozygous 45303287 X 56135592 56135593 A AAG 8 INTERGENIC homozygous 45136433 X 56138398 56138399 T - 7 INTERGENIC heterozygous 45546685 X 56156487 56156488 C CA 6 GENIC heterozygous 45569075 X 56158308 56158312 GGAA ---- 6 GENIC homozygous 45587564 X 56176234 56176235 T TACAC 6 GENIC homozygous 45136437 X 56176746 56176747 A ACT 19 GENIC heterozygous 45633058 X 56181805 56181807 AC -- 4 GENIC homozygous 45587566 X 56185701 56185702 T TAC 1 INTERGENIC homozygous 45136439 X 56189453 56189454 T TTG 1 GENIC homozygous 45324833 X 56195426 56195427 T TAGG 11 GENIC heterozygous 45324834 X 56196098 56196099 T - 7 GENIC homozygous 45303290 X 56201029 56201030 A - 4 GENIC heterozygous 45136441 X 56201815 56201816 G GT 6 GENIC homozygous 45136442 X 56201864 56201865 T - 5 GENIC heterozygous 45324835 X 56203651 56203652 T TGTGTGTGTG 6 GENIC heterozygous 45509100 X 56207309 56207310 A - 11 GENIC heterozygous 45324836 X 56211728 56211730 AG -- 6 GENIC heterozygous 45509104 X 56215681 56215682 A ATTCTTTCTTTCTTTCT 4 GENIC homozygous 45509108 X 56215885 56215886 T TCTTCCTTC 1 GENIC homozygous 45546689 X 56218069 56218070 T TTCTCTC 1 GENIC homozygous 45587568 X 56228104 56228106 AC -- 8 GENIC homozygous 45136448 X 56234826 56234827 T TCA 2 GENIC heterozygous 45136449 X 56249746 56249747 A - 7 GENIC homozygous 45255674 X 56251442 56251444 TG -- 8 GENIC homozygous 45136450 X 56261894 56261895 G A 13 GENIC homozygous 45136451 X 56265438 56265440 AC -- 5 GENIC homozygous 45569077 X 56310309 56310310 C CA 7 GENIC heterozygous 45324837 X 56312231 56312232 C CT 5 GENIC homozygous 45136453 X 56315867 56315868 C CA 11 INTERGENIC heterozygous 45717106 X 56333042 56333050 TCTCTCTC -------- 6 INTERGENIC heterozygous 45546695 X 56340242 56340243 C CATCT 5 INTERGENIC heterozygous 45569082 X 56333044 56333050 TCTCTC ------ 6 INTERGENIC heterozygous 45509112 X 56333157 56333158 G A 17 INTERGENIC homozygous 45136467 X 56337152 56337154 TG -- 10 INTERGENIC heterozygous 45509114 X 56337554 56337555 C CAAGA 14 INTERGENIC homozygous 45136468 X 56171978 56171979 T - 8 GENIC heterozygous 45612677 X 56345761 56345762 A ACCCATTT 23 INTERGENIC heterozygous 45509116 X 56345769 56345773 AGGA ---- 21 INTERGENIC heterozygous 45509118 X 56345773 56345774 G GT 22 INTERGENIC heterozygous 45509120 X 56349758 56349759 A - 12 GENIC possibly homozygous 45255682 X 56351017 56351018 C G 14 GENIC homozygous 45136470 X 56351358 56351359 C CA 10 GENIC homozygous 45136471 X 56364307 56364308 A - 5 INTERGENIC heterozygous 45569086 X 56366349 56366351 GT -- 2 INTERGENIC homozygous 45136472 X 56368437 56368439 AG -- 8 INTERGENIC heterozygous 45509122 X 56369903 56369904 A G 3 INTERGENIC homozygous 45136474 X 56372601 56372603 TG -- 9 INTERGENIC heterozygous 45546698 X 56374712 56374713 A AGTTGGCAGACAT 5 INTERGENIC homozygous 45477985 X 56374715 56374716 T TTTGAGTGTTG 5 INTERGENIC homozygous 45477987 X 56374716 56374717 C CTTGCTTGCTTGCTTGCAAAG 5 INTERGENIC homozygous 45477989 X 56374718 56374719 C CTGTTTCA 5 INTERGENIC homozygous 45509124 X 56374722 56374723 C A 5 INTERGENIC homozygous 45509126 X 56374725 56374726 C A 4 INTERGENIC homozygous 45509128 X 56374727 56374728 C A 4 INTERGENIC homozygous 45509130 X 56374729 56374730 C A 4 INTERGENIC homozygous 45509132 X 56381957 56381958 C CGT 4 INTERGENIC homozygous 45136475 X 56389130 56389131 G - 3 GENIC heterozygous 45633066 X 56403203 56403204 C - 4 GENIC homozygous 45136479 X 56408946 56408947 C CA 6 GENIC homozygous 45136480 X 56424366 56424367 T C 23 INTERGENIC heterozygous 45477991 X 56424368 56424369 C A 24 INTERGENIC heterozygous 45477993 X 56425472 56425473 A G 16 INTERGENIC homozygous 45136504 X 56425485 56425486 A AGCCTTTCCCTCAGTTTCT 15 INTERGENIC heterozygous 45509134 X 56425506 56425507 A AT 17 INTERGENIC heterozygous 45136506 X 56429606 56429607 C CATTGTGTT 2 INTERGENIC homozygous 45136522 X 56429825 56429826 A C 18 INTERGENIC heterozygous 45136531 X 56430240 56430241 G C 21 INTERGENIC heterozygous 45136539 X 56430290 56430291 A ACGG 16 INTERGENIC heterozygous 45136540 X 56430290 56430291 A ATAT 16 INTERGENIC heterozygous 45136541 X 56430332 56430333 A AGGTATTGAT 21 INTERGENIC heterozygous 45136547 X 56430379 56430388 TTGTTGTTG --------- 13 INTERGENIC heterozygous 45477995 X 56430408 56430409 T - 9 INTERGENIC heterozygous 45477997 X 56437697 56437831 CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTGTGTCTATGGCTGAGTAATGCTCAATTGTGTACCTAAACCAACCACCCTCCCTCCCTCTCTCTCTTTCTTTCTTTCTTTCTTTCT -------------------------------------------------------------------------------------------------------------------------------------- 9 INTERGENIC heterozygous 45587579 X 56439285 56439289 TGTG ---- 11 INTERGENIC heterozygous 45509143 X 56440624 56440625 T - 8 INTERGENIC heterozygous 45136553 X 56443205 56443206 C - 9 INTERGENIC heterozygous 45569090 X 56443945 56443946 T - 10 INTERGENIC heterozygous 45136556 X 56445245 56445246 T - 4 INTERGENIC heterozygous 45136559 X 56446222 56446223 C CT 2 INTERGENIC heterozygous 45509149 X 56447549 56447550 T - 3 INTERGENIC heterozygous 45509151 X 56449884 56449885 C T 17 INTERGENIC heterozygous 45136587 X 56450650 56450651 T - 5 INTERGENIC heterozygous 45649007 X 56452252 56452253 G - 7 INTERGENIC homozygous 45136596 X 56452451 56452452 T TC 5 INTERGENIC homozygous 45136598 X 56457920 56457921 C CTAT 4 INTERGENIC homozygous 45136601 X 56459710 56459711 T TA 14 INTERGENIC heterozygous 45477999 X 56459712 56459713 C CAAGCAGT 13 INTERGENIC heterozygous 45478001 X 56461675 56461676 C A 14 INTERGENIC heterozygous 45509157 X 56461716 56461717 A - 12 INTERGENIC heterozygous 45509159 X 56470869 56470871 TA -- 2 INTERGENIC homozygous 45509161 X 56483935 56483936 C CT 6 INTERGENIC heterozygous 45303317 X 56492249 56492250 G C 13 INTERGENIC homozygous 45136613 X 56492338 56492339 A AG 10 INTERGENIC homozygous 45136614 X 56492344 56492345 A - 8 INTERGENIC homozygous 45478003 X 56492347 56492348 C A 8 INTERGENIC homozygous 45509163 X 56492349 56492350 G C 8 INTERGENIC homozygous 45509165 X 56492351 56492352 G GT 8 INTERGENIC homozygous 45509167 X 56492360 56492361 G T 6 INTERGENIC homozygous 45136617 X 56492365 56492366 G A 5 INTERGENIC homozygous 45136618 X 56492369 56492370 T A 3 INTERGENIC homozygous 45136619 X 56492378 56492379 A C 1 INTERGENIC homozygous 45136620 X 56492379 56492380 G T 1 INTERGENIC homozygous 45136621 X 56492384 56492385 A T 1 INTERGENIC homozygous 45255693 X 56492386 56492387 A T 1 INTERGENIC homozygous 45255694 X 56492389 56492390 A T 1 INTERGENIC homozygous 45255695 X 56492390 56492391 A T 1 INTERGENIC homozygous 45255696 X 56492413 56492414 A G 1 INTERGENIC homozygous 45509169 X 56492414 56492415 T A 2 INTERGENIC homozygous 45509171 X 56492438 56492439 G - 2 INTERGENIC homozygous 45136623 X 56492443 56492444 A - 3 INTERGENIC homozygous 45136624 X 56492462 56492463 G - 5 INTERGENIC homozygous 45136625 X 56492502 56492503 G A 6 INTERGENIC homozygous 45136628 X 56492488 56492489 C CA 7 INTERGENIC homozygous 45136626 X 56492496 56492497 G - 6 INTERGENIC homozygous 45136627 X 56374742 56374743 C - 1 INTERGENIC homozygous 45694438 X 56492585 56492586 G GT 4 INTERGENIC homozygous 45136629 X 56496032 56496034 TG -- 6 INTERGENIC heterozygous 45255697 X 56508288 56508292 TGTG ---- 7 INTERGENIC possibly homozygous 45788670 X 56519770 56519771 G GT 3 INTERGENIC homozygous 45136642 X 56520256 56520258 TG -- 6 INTERGENIC heterozygous 45546713 X 56525519 56525520 C A 12 INTERGENIC homozygous 45136647 X 56525520 56525521 T G 13 INTERGENIC homozygous 45136648 X 56525533 56525534 C CA 12 INTERGENIC homozygous 45136649 X 56525551 56525552 C G 6 INTERGENIC homozygous 45136650 X 56525652 56525653 T G 11 INTERGENIC homozygous 45136651 X 56525753 56525754 G A 9 INTERGENIC homozygous 45136652 X 56525757 56525758 G A 10 INTERGENIC homozygous 45136653 X 56525891 56525892 C T 4 INTERGENIC homozygous 45136654 X 56525898 56525899 G A 5 INTERGENIC homozygous 45478005 X 56525899 56525900 A T 5 INTERGENIC homozygous 45478007 X 56525901 56525902 C A 5 INTERGENIC homozygous 45478008 X 56525911 56525912 G A 5 INTERGENIC homozygous 45136655 X 56544503 56544504 G - 6 INTERGENIC homozygous 45136656 X 56547933 56547934 G C 5 INTERGENIC homozygous 45136657 X 56547936 56547937 A T 5 INTERGENIC homozygous 45136658 X 56547937 56547938 A T 5 INTERGENIC homozygous 45136659 X 56547975 56547976 T C 5 INTERGENIC homozygous 45478010 X 56547977 56547978 T A 5 INTERGENIC homozygous 45478012 X 56547983 56547984 T - 5 INTERGENIC homozygous 45136660 X 56547987 56547988 G T 5 INTERGENIC homozygous 45136661 X 56547997 56547998 G - 4 INTERGENIC homozygous 45136663 X 56547999 56548000 C A 4 INTERGENIC homozygous 45509177 X 56548008 56548009 C T 4 INTERGENIC homozygous 45136664 X 56548011 56548012 C A 4 INTERGENIC homozygous 45136665 X 56548015 56548016 G T 4 INTERGENIC homozygous 45509179 X 56548018 56548019 A G 2 INTERGENIC homozygous 45509181 X 56548024 56548025 G T 1 INTERGENIC homozygous 45136666 X 56548052 56548053 A T 1 INTERGENIC homozygous 45509183 X 56548053 56548054 G A 2 INTERGENIC homozygous 45509185 X 56548055 56548056 G C 3 INTERGENIC homozygous 45136669 X 56548058 56548059 G A 4 INTERGENIC homozygous 45136670 X 56548067 56548068 G A 5 INTERGENIC homozygous 45136671 X 56548071 56548072 G A 5 INTERGENIC homozygous 45136672 X 56548074 56548075 G C 5 INTERGENIC homozygous 45136673 X 56548078 56548079 A C 5 INTERGENIC homozygous 45136674 X 56548086 56548087 G A 6 INTERGENIC homozygous 45136675 X 56548089 56548090 G C 7 INTERGENIC homozygous 45136676 X 56548094 56548095 G A 8 INTERGENIC homozygous 45136677 X 56548096 56548097 G T 8 INTERGENIC homozygous 45136678 X 56548696 56548698 TA -- 1 INTERGENIC homozygous 45546715 X 56550033 56550034 C T 5 INTERGENIC homozygous 45136680 X 56550075 56550076 C A 6 INTERGENIC homozygous 45136681 X 56571688 56571689 C G 4 GENIC homozygous 45136683 X 56574231 56574233 AG -- 6 GENIC heterozygous 45803601 X 56577031 56577039 CTGATCCA -------- 5 GENIC homozygous 45136690 X 56583743 56583744 C - 5 GENIC homozygous 45136691 X 56615639 56615640 T TTTC 9 GENIC homozygous 45136694 X 56636834 56636835 C - 12 GENIC homozygous 45136699 X 56651905 56651906 G - 10 GENIC homozygous 45136701 X 56651911 56651912 A - 12 GENIC homozygous 45136702 X 56651920 56651921 C - 11 GENIC homozygous 45136703 X 56652054 56652055 T - 5 GENIC homozygous 45136704 X 56652057 56652058 T - 5 GENIC homozygous 45136705 X 56652082 56652083 T - 4 GENIC homozygous 45136706 X 56652096 56652097 T - 5 GENIC homozygous 45136707 X 56652097 56652098 C G 5 GENIC homozygous 45509194 X 56652100 56652101 T - 5 GENIC homozygous 45136708 X 56652102 56652103 T - 5 GENIC homozygous 45136709 X 56652105 56652106 C - 5 GENIC homozygous 45136710 X 56652109 56652110 C - 5 GENIC homozygous 45136711 X 56670536 56670538 CA -- 6 GENIC heterozygous 45649010 X 56688514 56688515 C - 4 GENIC homozygous 45136713 X 56702672 56702673 A AT 11 GENIC homozygous 45136718 X 56702615 56702616 G GT 11 GENIC homozygous 45136717 X 56702629 56702630 G T 10 GENIC homozygous 45255713 X 56702630 56702631 A G 9 GENIC homozygous 45255714 X 56702727 56702728 T - 16 GENIC homozygous 45136719 X 56702974 56702975 A AG 5 GENIC homozygous 45136720 X 56711951 56711952 T TTAGA 4 GENIC homozygous 45136722 X 56714813 56714814 A AACACACACAC 15 GENIC heterozygous 45633080 X 56714814 56714816 AC -- 15 GENIC heterozygous 45546723 X 56714845 56714847 CA -- 21 GENIC homozygous 45136723 X 56715690 56715691 T TGA 9 GENIC homozygous 45136724 X 56716790 56716791 C CCAATAGAAAGACTACAAATGAGGTTGCTTTG 5 GENIC heterozygous 45546725 X 56722806 56722807 A AAAATGTAAGCAGGAAGGGAGACATAACTACAGATTCAGAGGAAATTCAAAAAATCATCAGATC 4 GENIC homozygous 45509198 X 56736130 56736131 G - 8 GENIC heterozygous 45633082 X 56742637 56742638 C - 5 GENIC heterozygous 45478022 X 56759322 56759324 AC -- 1 GENIC homozygous 45509204