chr start stop reference nuc variant nuc depth genic status zygosity variant ID X 55470065 55470066 T TTTAGAGCTCTGTACCTGCAGCTAGGAG 6 INTERGENIC homozygous 45509003 X 55485645 55485646 C CTCTTCT 6 INTERGENIC homozygous 45136315 X 55485895 55485897 AT -- 13 INTERGENIC homozygous 45136316 X 55486908 55486909 G C 4 INTERGENIC homozygous 45477968 X 55488166 55488173 AAAGGTT ------- 1 INTERGENIC homozygous 45255645 X 55521137 55521209 CTTTTGTCCCTGGGTTTCAACAGGTCTCCTAGTAGGCCTGTGGCCCTGGCTGTAGCAGACCTCCTGTGGGGA ------------------------------------------------------------------------ 1 INTERGENIC homozygous 45509007 X 55561255 55561256 T TCTGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATC 2 INTERGENIC homozygous 45509011 X 55610969 55610970 T C 9 INTERGENIC homozygous 45136348 X 55620845 55620846 C CTT 4 INTERGENIC heterozygous 45255652 X 55637098 55637099 T - 1 GENIC homozygous 45136350 X 55649360 55649361 T TAGCC 6 GENIC homozygous 45136352 X 55658764 55658765 G GAGGAAAAACTACAC 1 GENIC homozygous 45509015 X 55675352 55675354 GT -- 1 GENIC homozygous 45509019 X 55680486 55680487 C CAG 1 GENIC homozygous 45509021 X 55680736 55680737 G A 6 GENIC homozygous 45509023 X 55621717 55621718 G GT 2 INTERGENIC heterozygous 45569065 X 55680436 55680438 CT -- 3 GENIC heterozygous 45569067 X 55683576 55683578 CA -- 6 GENIC heterozygous 45546641 X 55729283 55729284 C CA 2 INTERGENIC homozygous 45136363 X 55729286 55729287 T TC 2 INTERGENIC homozygous 45136364 X 55747677 55747681 CTCT ---- 1 INTERGENIC homozygous 45255655 X 55749599 55749601 CA -- 4 INTERGENIC heterozygous 45509027 X 55752802 55752803 T - 4 INTERGENIC homozygous 45136366 X 55764361 55764362 G GGAGGAGGAGGAAACAGTACTCCCCAGGCCACTGGTAACTTTCT 2 INTERGENIC homozygous 45509029 X 55788721 55788722 T TTTG 15 INTERGENIC homozygous 45136370 X 55820507 55820509 AC -- 7 INTERGENIC heterozygous 45255658 X 55851095 55851096 A AC 6 INTERGENIC homozygous 45136376 X 55864387 55864388 T A 2 INTERGENIC homozygous 45136380 X 55872554 55872556 CA -- 13 GENIC heterozygous 45255660 X 55881545 55881547 CT -- 1 INTERGENIC homozygous 45255661 X 55887304 55887305 T C 3 INTERGENIC homozygous 45136383 X 55890303 55890305 AC -- 5 INTERGENIC heterozygous 45509040 X 55897505 55897506 T C 19 GENIC possibly homozygous 45136385 X 55906639 55906640 C CAT 5 INTERGENIC homozygous 45136387 X 55911973 55911974 G GAGGA 3 GENIC homozygous 45509042 X 55912038 55912039 G GGGAA 4 GENIC homozygous 45509044 X 55912856 55912857 A C 7 GENIC homozygous 45136389 X 55914989 55914990 G GGTGT 1 GENIC homozygous 45509046 X 55925754 55925756 AC -- 7 INTERGENIC heterozygous 45136390 X 55927152 55927153 G - 9 INTERGENIC homozygous 45136391 X 55927155 55927156 A T 9 INTERGENIC homozygous 45477975 X 55930490 55930491 G GT 7 INTERGENIC homozygous 45303275 X 55951293 55951297 GTGT ---- 3 GENIC homozygous 45255663 X 55970081 55970082 A - 5 GENIC heterozygous 45477977 X 55976011 55976012 A C 10 GENIC homozygous 45136399 X 55976012 55976013 A T 10 GENIC homozygous 45136400 X 55976037 55976038 G A 11 GENIC homozygous 45136401 X 55978728 55978730 TG -- 2 GENIC homozygous 45509054 X 55982459 55982460 T TC 6 GENIC homozygous 45136402 X 56001553 56001554 C CAGGA 1 GENIC homozygous 45509062 X 55989423 55989424 G GA 5 GENIC homozygous 45509056 X 55989426 55989427 C A 7 GENIC homozygous 45509058 X 55997914 55997916 CA -- 2 GENIC heterozygous 45546656 X 55999475 55999479 ACAG ---- 3 GENIC homozygous 45509060 X 56061017 56061018 T - 8 GENIC homozygous 45136411 X 56061038 56061039 C - 6 GENIC homozygous 45136412 X 56066109 56066110 T C 6 GENIC homozygous 45136414 X 56066130 56066131 T C 4 GENIC homozygous 45136415 X 56066131 56066132 G A 4 GENIC homozygous 45136416 X 56088025 56088026 T A 3 GENIC heterozygous 45342340 X 56091104 56091105 C T 1 GENIC homozygous 45136417 X 56094134 56094168 CATCAATCCCTCACAGACAAAATGACCAGCAGAC ---------------------------------- 1 GENIC homozygous 45509065 X 56094171 56094172 G GC 1 GENIC homozygous 45509067 X 56094172 56094173 A T 1 GENIC homozygous 45509069 X 56094177 56094178 C - 1 GENIC homozygous 45509071 X 56094180 56094181 A AG 1 GENIC homozygous 45546658 X 56094184 56094187 TGC --- 1 GENIC homozygous 45546660 X 56094189 56094190 C A 1 GENIC homozygous 45546662 X 56094190 56094191 T TTTG 1 GENIC homozygous 45546664 X 56102981 56102985 CTTT ---- 3 INTERGENIC homozygous 45509073 X 56108739 56108740 G GA 5 INTERGENIC heterozygous 45136426 X 56108739 56108740 G GAA 5 INTERGENIC heterozygous 45509077 X 56110589 56110590 T - 8 INTERGENIC heterozygous 45569069 X 56110591 56110592 T TG 8 INTERGENIC heterozygous 45569071 X 56113046 56113050 TAGC ---- 14 INTERGENIC heterozygous 45509081 X 56113051 56113052 A AT 13 INTERGENIC heterozygous 45509084 X 56116425 56116426 G GACAGCATACACCTTTAATCCCAGCACTCAGGAGACAGAGGCAGGTGGATCTTTA 4 INTERGENIC heterozygous 45509088 X 56123941 56123942 T - 5 INTERGENIC heterozygous 45136427 X 56125486 56125487 T - 2 INTERGENIC homozygous 45477981 X 56127581 56127582 T C 5 INTERGENIC homozygous 45136430 X 56131063 56131064 G - 4 INTERGENIC heterozygous 45303287 X 56135592 56135593 A AAG 5 INTERGENIC homozygous 45136433 X 56137919 56137921 TG -- 3 INTERGENIC heterozygous 45546683 X 56141645 56141657 TCTTTCTTTCTT ------------ 3 INTERGENIC homozygous 45569073 X 56145135 56145136 T - 4 INTERGENIC heterozygous 45342406 X 56156487 56156488 C CA 3 GENIC heterozygous 45569075 X 56176234 56176235 T TACAC 2 GENIC homozygous 45136437 X 56179222 56179223 A - 3 GENIC heterozygous 45509096 X 56185701 56185702 T TAC 4 INTERGENIC homozygous 45136439 X 56191233 56191234 T - 4 GENIC homozygous 45136440 X 56201029 56201030 A - 1 GENIC homozygous 45136441 X 56201815 56201816 G GT 1 GENIC homozygous 45136442 X 56203651 56203652 T TGTGTGTGTG 3 GENIC homozygous 45509100 X 56203902 56203903 T - 5 GENIC heterozygous 45136445 X 56210327 56210329 GT -- 2 GENIC homozygous 45509102 X 56215681 56215682 A ATTCTTTCTTTCTTTCT 3 GENIC homozygous 45509108 X 56215885 56215886 T TCTTCCTTC 2 GENIC homozygous 45546689 X 56234826 56234827 T TCA 1 GENIC homozygous 45136449 X 56236819 56236820 G GT 1 GENIC homozygous 45546691 X 56249746 56249747 A - 3 GENIC homozygous 45255674 X 56251442 56251444 TG -- 1 GENIC homozygous 45136450 X 56261894 56261895 G A 16 GENIC homozygous 45136451 X 56265438 56265440 AC -- 7 GENIC heterozygous 45569077 X 56312231 56312232 C CT 10 GENIC homozygous 45136453 X 56333044 56333050 TCTCTC ------ 1 INTERGENIC homozygous 45509112 X 56333157 56333158 G A 9 INTERGENIC homozygous 45136467 X 56334523 56334525 TG -- 7 INTERGENIC heterozygous 45569079 X 56337554 56337555 C CAAGA 9 INTERGENIC homozygous 45136468 X 56340242 56340243 C CATCT 3 INTERGENIC homozygous 45569082 X 56345761 56345762 A ACCCATTT 22 INTERGENIC heterozygous 45509116 X 56345769 56345773 AGGA ---- 19 INTERGENIC heterozygous 45509118 X 56345773 56345774 G GT 19 INTERGENIC heterozygous 45509120 X 56351017 56351018 C T 5 GENIC homozygous 45439012 X 56351358 56351359 C CA 8 GENIC homozygous 45136471 X 56353915 56353916 G GAAC 4 INTERGENIC heterozygous 45569084 X 56364307 56364308 A - 8 INTERGENIC heterozygous 45569086 X 56369903 56369904 A G 8 INTERGENIC possibly homozygous 45136474 X 56372601 56372603 TG -- 8 INTERGENIC heterozygous 45546698 X 56374712 56374713 A AGTTGGCAGACAT 5 INTERGENIC homozygous 45477985 X 56374715 56374716 T TTTGAGTGTTG 5 INTERGENIC homozygous 45477987 X 56374716 56374717 C CTTGCTTGCTTGCTTGCAAAG 5 INTERGENIC homozygous 45477989 X 56374718 56374719 C CTGTTTCA 5 INTERGENIC homozygous 45509124 X 56374722 56374723 C A 4 INTERGENIC homozygous 45509126 X 56374725 56374726 C A 4 INTERGENIC homozygous 45509128 X 56374727 56374728 C A 4 INTERGENIC homozygous 45509130 X 56374729 56374730 C A 4 INTERGENIC homozygous 45509132 X 56381957 56381958 C CGT 5 INTERGENIC heterozygous 45136475 X 56389461 56389462 G GTTT 2 GENIC heterozygous 45569088 X 56403203 56403204 C - 5 GENIC homozygous 45136479 X 56408946 56408947 C CA 8 GENIC homozygous 45136480 X 56422893 56422894 G GA 2 INTERGENIC homozygous 45136481 X 56424366 56424367 T C 19 INTERGENIC heterozygous 45477991 X 56424368 56424369 C A 20 INTERGENIC heterozygous 45477993 X 56425472 56425473 A G 13 INTERGENIC homozygous 45136504 X 56425485 56425486 A AGCCTTTCCCTCAGTTTCT 14 INTERGENIC heterozygous 45509134 X 56425506 56425507 A AT 15 INTERGENIC heterozygous 45136506 X 56428354 56428355 T - 1 INTERGENIC homozygous 45136517 X 56429606 56429607 C CATTGTGTT 1 INTERGENIC homozygous 45136522 X 56429825 56429826 A C 13 INTERGENIC heterozygous 45136531 X 56429941 56429943 AC -- 18 INTERGENIC heterozygous 45509136 X 56429945 56429953 AAGGAGCA -------- 20 INTERGENIC heterozygous 45509138 X 56430240 56430241 G C 18 INTERGENIC heterozygous 45136539 X 56430290 56430291 A ACGG 17 INTERGENIC heterozygous 45136540 X 56430290 56430291 A ATAT 17 INTERGENIC heterozygous 45136541 X 56430332 56430333 A AGGTATTGAT 16 INTERGENIC heterozygous 45136547 X 56430379 56430388 TTGTTGTTG --------- 13 INTERGENIC heterozygous 45477995 X 56439285 56439289 TGTG ---- 2 INTERGENIC heterozygous 45509143 X 56440624 56440625 T - 5 INTERGENIC heterozygous 45136553 X 56443205 56443206 C - 21 INTERGENIC heterozygous 45569090 X 56443759 56443760 A ACTCTTCATGAT 9 INTERGENIC heterozygous 45509145 X 56443762 56443763 G GT 9 INTERGENIC heterozygous 45509147 X 56443945 56443946 T - 12 INTERGENIC heterozygous 45136556 X 56449884 56449885 C T 21 INTERGENIC heterozygous 45136587 X 56445245 56445246 T - 10 INTERGENIC heterozygous 45136559 X 56446222 56446223 C CT 5 INTERGENIC heterozygous 45509149 X 56447549 56447550 T - 10 INTERGENIC heterozygous 45509151 X 56447749 56447750 T TG 6 INTERGENIC heterozygous 45136577 X 56450953 56450954 C - 6 INTERGENIC heterozygous 45509153 X 56452252 56452253 G - 5 INTERGENIC homozygous 45136596 X 56452451 56452452 T TC 5 INTERGENIC homozygous 45136598 X 56457920 56457921 C CTAT 4 INTERGENIC homozygous 45136601 X 56459710 56459711 T TA 11 INTERGENIC heterozygous 45477999 X 56459712 56459713 C CAAGCAGT 11 INTERGENIC heterozygous 45478001 X 56467656 56467658 AC -- 6 INTERGENIC heterozygous 45569092 X 56470869 56470871 TA -- 2 INTERGENIC homozygous 45509161 X 56492249 56492250 G C 11 INTERGENIC homozygous 45136613 X 56492338 56492339 A AG 10 INTERGENIC homozygous 45136614 X 56492344 56492345 A - 10 INTERGENIC homozygous 45478003 X 56492347 56492348 C A 11 INTERGENIC homozygous 45509163 X 56492349 56492350 G C 11 INTERGENIC homozygous 45509165 X 56492351 56492352 G GT 11 INTERGENIC homozygous 45509167 X 56492360 56492361 G T 12 INTERGENIC homozygous 45136617 X 56492365 56492366 G A 12 INTERGENIC homozygous 45136618 X 56492369 56492370 T A 12 INTERGENIC homozygous 45136619 X 56492378 56492379 A C 10 INTERGENIC homozygous 45136620 X 56492379 56492380 G T 10 INTERGENIC homozygous 45136621 X 56492384 56492385 A T 12 INTERGENIC homozygous 45255693 X 56492386 56492387 A T 12 INTERGENIC homozygous 45255694 X 56492389 56492390 A T 12 INTERGENIC homozygous 45255695 X 56492390 56492391 A T 11 INTERGENIC homozygous 45255696 X 56492397 56492398 T - 12 INTERGENIC homozygous 45136622 X 56492413 56492414 A G 10 INTERGENIC homozygous 45509169 X 56492414 56492415 T A 10 INTERGENIC homozygous 45509171 X 56492438 56492439 G - 11 INTERGENIC homozygous 45136623 X 56492443 56492444 A - 10 INTERGENIC homozygous 45136624 X 56492462 56492463 G - 8 INTERGENIC homozygous 45136625 X 56492488 56492489 C CA 6 INTERGENIC homozygous 45136626 X 56492496 56492497 G - 10 INTERGENIC homozygous 45136627 X 56492502 56492503 G A 10 INTERGENIC homozygous 45136628 X 56492585 56492586 G GT 13 INTERGENIC homozygous 45136629 X 56511044 56511045 A AG 1 INTERGENIC homozygous 45136631 X 56511187 56511190 GTC --- 1 INTERGENIC homozygous 45255700 X 56511191 56511192 C CTG 1 INTERGENIC homozygous 45569093 X 56511193 56511194 T TG 2 INTERGENIC homozygous 45255701 X 56519770 56519771 G GT 4 INTERGENIC homozygous 45136642 X 56525519 56525520 C A 10 INTERGENIC homozygous 45136647 X 56525520 56525521 T G 10 INTERGENIC homozygous 45136648 X 56525533 56525534 C CA 8 INTERGENIC homozygous 45136649 X 56525551 56525552 C G 10 INTERGENIC homozygous 45136650 X 56525891 56525892 C T 9 INTERGENIC homozygous 45136654 X 56525652 56525653 T G 12 INTERGENIC homozygous 45136651 X 56525753 56525754 G A 10 INTERGENIC homozygous 45136652 X 56525757 56525758 G A 10 INTERGENIC homozygous 45136653 X 56525898 56525899 G A 8 INTERGENIC homozygous 45478005 X 56525899 56525900 A T 8 INTERGENIC homozygous 45478007 X 56525901 56525902 C A 8 INTERGENIC homozygous 45478008 X 56525911 56525912 G A 5 INTERGENIC homozygous 45136655 X 56541008 56541010 AC -- 7 INTERGENIC heterozygous 45509175 X 56544503 56544504 G - 1 INTERGENIC homozygous 45136656 X 56547933 56547934 G C 14 INTERGENIC homozygous 45136657 X 56547936 56547937 A T 16 INTERGENIC homozygous 45136658 X 56547937 56547938 A T 16 INTERGENIC homozygous 45136659 X 56547975 56547976 T C 12 INTERGENIC homozygous 45478010 X 56547977 56547978 T A 12 INTERGENIC homozygous 45478012 X 56547983 56547984 T - 12 INTERGENIC homozygous 45136660 X 56547987 56547988 G T 12 INTERGENIC homozygous 45136661 X 56547997 56547998 G - 10 INTERGENIC homozygous 45136663 X 56547999 56548000 C A 9 INTERGENIC homozygous 45509177 X 56548008 56548009 C T 9 INTERGENIC homozygous 45136664 X 56548011 56548012 C A 9 INTERGENIC homozygous 45136665 X 56548015 56548016 G T 7 INTERGENIC homozygous 45509179 X 56548018 56548019 A G 8 INTERGENIC homozygous 45509181 X 56548024 56548025 G T 8 INTERGENIC homozygous 45136666 X 56548032 56548033 G A 8 INTERGENIC homozygous 45136667 X 56548034 56548035 G - 8 INTERGENIC homozygous 45136668 X 56548052 56548053 A T 10 INTERGENIC homozygous 45509183 X 56548053 56548054 G A 10 INTERGENIC homozygous 45509185 X 56548055 56548056 G C 10 INTERGENIC homozygous 45136669 X 56548058 56548059 G A 9 INTERGENIC homozygous 45136670 X 56548067 56548068 G A 11 INTERGENIC homozygous 45136671 X 56548071 56548072 G A 12 INTERGENIC homozygous 45136672 X 56548074 56548075 G C 13 INTERGENIC homozygous 45136673 X 56548078 56548079 A C 13 INTERGENIC homozygous 45136674 X 56548086 56548087 G A 14 INTERGENIC homozygous 45136675 X 56548089 56548090 G C 14 INTERGENIC homozygous 45136676 X 56548094 56548095 G A 14 INTERGENIC homozygous 45136677 X 56548096 56548097 G T 14 INTERGENIC homozygous 45136678 X 56548696 56548698 TA -- 1 INTERGENIC homozygous 45546715 X 56550033 56550034 C T 2 INTERGENIC homozygous 45136680 X 56550075 56550076 C A 4 INTERGENIC homozygous 45136681 X 56555050 56555052 GA -- 4 INTERGENIC homozygous 45509187 X 56557757 56557759 AA -- 8 GENIC heterozygous 45303343 X 56571688 56571689 C G 3 GENIC homozygous 45136683 X 56577031 56577039 CTGATCCA -------- 15 GENIC homozygous 45136690 X 56583743 56583744 C - 6 GENIC homozygous 45136691 X 56615639 56615640 T TTTC 7 GENIC homozygous 45136694 X 56636834 56636835 C - 15 GENIC homozygous 45136699 X 56641644 56641646 TG -- 1 GENIC homozygous 45546717 X 56647640 56647641 A AG 7 GENIC heterozygous 45509190 X 56651905 56651906 G - 11 GENIC homozygous 45136701 X 56651911 56651912 A - 12 GENIC homozygous 45136702 X 56651920 56651921 C - 12 GENIC homozygous 45136703 X 56652054 56652055 T - 5 GENIC homozygous 45136704 X 56652057 56652058 T - 4 GENIC homozygous 45136705 X 56652082 56652083 T - 7 GENIC homozygous 45136706 X 56652096 56652097 T - 6 GENIC homozygous 45136707 X 56652097 56652098 C G 6 GENIC homozygous 45509194 X 56652100 56652101 T - 6 GENIC homozygous 45136708 X 56652102 56652103 T - 7 GENIC homozygous 45136709 X 56652105 56652106 C - 7 GENIC homozygous 45136710 X 56652109 56652110 C - 8 GENIC homozygous 45136711 X 56667811 56667812 C CA 5 GENIC homozygous 45478016 X 56679409 56679410 A AATCT 1 GENIC homozygous 45509196 X 56688514 56688515 C - 3 GENIC homozygous 45136713 X 56689178 56689181 TGA --- 17 GENIC heterozygous 45136714 X 56699274 56699275 A - 4 GENIC heterozygous 45569095 X 56702615 56702616 G GT 5 GENIC homozygous 45136717 X 56702629 56702630 G T 5 GENIC homozygous 45255713 X 56702630 56702631 A G 5 GENIC homozygous 45255714 X 56702672 56702673 A AT 3 GENIC homozygous 45136718 X 56702727 56702728 T - 7 GENIC homozygous 45136719 X 56702974 56702975 A AG 11 GENIC homozygous 45136720 X 56703219 56703223 TATG ---- 4 GENIC homozygous 45569098 X 56711951 56711952 T TTAGA 3 GENIC homozygous 45136722 X 56714845 56714847 CA -- 18 GENIC homozygous 45136723 X 56715690 56715691 T TGA 8 GENIC homozygous 45136724 X 56716387 56716388 T - 2 GENIC heterozygous 45569100 X 56719256 56719257 G GT 7 GENIC homozygous 45136727 X 56743658 56743659 C CAACA 1 GENIC homozygous 45478024 X 56753559 56753563 GAAA ---- 1 GENIC homozygous 45546729