chr start stop reference nuc variant nuc depth genic status zygosity variant ID 9 46962538 46962539 C CTTTT 8 INTERGENIC heterozygous 52471600 9 46962538 46962539 C CTTT 8 INTERGENIC heterozygous 53038417 9 46962775 46962776 T A 12 INTERGENIC homozygous 52471601 9 46964705 46964706 A T 1 INTERGENIC homozygous 52199405 9 46966011 46966012 C CCTTATCGACT 5 GENIC homozygous 52199414 9 46966241 46966242 G T 3 GENIC homozygous 53309436 9 46966427 46966428 A G 6 GENIC homozygous 52199418 9 46967146 46967147 A G 10 GENIC homozygous 52199420 9 46967323 46967324 C A 5 GENIC homozygous 53309437 9 46967326 46967327 T A 5 GENIC homozygous 52199422 9 46967717 46967718 C T 6 GENIC homozygous 52199426 9 46968056 46968057 C G 7 GENIC homozygous 53309441 9 46968305 46968306 A G 8 GENIC homozygous 52199428 9 46969300 46969301 T A 11 GENIC homozygous 52199436 9 46969399 46969400 T A 7 GENIC homozygous 52471604 9 46972328 46972329 C T 3 GENIC homozygous 52853259 9 46967098 46967099 T A 6 GENIC homozygous 53621221 9 46968309 46968310 A T 9 GENIC homozygous 53621222 9 46968648 46968649 C T 4 GENIC homozygous 53621223 9 46970834 46970870 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT ------------------------------------ 2 GENIC homozygous 53648516 9 46970871 46970872 T TAA 2 GENIC homozygous 53648517 9 46972837 46972841 ACAT ---- 1 GENIC homozygous 53071059 9 46972994 46972995 G A 6 GENIC homozygous 52471607 9 46974365 46974366 G A 5 GENIC homozygous 52471610 9 46977172 46977182 GGGATGCTAT ---------- 5 GENIC homozygous 53621226 9 46977186 46977187 G GCA 6 GENIC homozygous 53621227 9 46977443 46977444 C - 3 GENIC homozygous 52199473 9 46977446 46977452 AACACC ------ 3 GENIC homozygous 52199475 9 46977994 46977995 A C 8 GENIC homozygous 52199479 9 46978854 46978855 G A 10 GENIC homozygous 52471613 9 46979596 46979597 A G 6 GENIC homozygous 52199483 9 46980549 46980550 G A 8 GENIC homozygous 52199485 9 46980613 46980614 C T 7 GENIC homozygous 52199487 9 46980667 46980668 G A 3 GENIC homozygous 52199489 9 46980869 46980870 G T 6 GENIC homozygous 52199491 9 46981251 46981252 A G 5 GENIC homozygous 52199495 9 46981336 46981337 T G 6 GENIC homozygous 52199497 9 46981655 46981656 G A 1 GENIC homozygous 52199503 9 46981692 46981693 T A 3 GENIC homozygous 53621228 9 46982287 46982288 A G 7 GENIC homozygous 52199513 9 46982337 46982338 C T 8 GENIC homozygous 52199514 9 46982565 46982566 A T 9 GENIC homozygous 53621229 9 46982971 46982972 G C 5 GENIC homozygous 52199518 9 46983228 46983229 G A 9 GENIC homozygous 52199522 9 46983373 46983374 A G 8 GENIC homozygous 52199526 9 46984024 46984025 C T 9 GENIC homozygous 52199532 9 46984626 46984627 T A 2 GENIC homozygous 52199536 9 46984813 46984814 G C 9 GENIC homozygous 52199540 9 46985070 46985071 G A 7 GENIC homozygous 52199545 9 46985319 46985320 C G 7 GENIC homozygous 53621230 9 46985611 46985612 T A 12 GENIC homozygous 52199547 9 46986491 46986492 G - 6 GENIC homozygous 52199555 9 46986539 46986540 A G 6 GENIC homozygous 52199557 9 46986661 46986662 C T 5 GENIC homozygous 53621232 9 46986760 46986761 G A 9 GENIC homozygous 53621233 9 46987571 46987572 T C 3 GENIC homozygous 52199561 9 46987575 46987576 G A 4 GENIC homozygous 52199563 9 46987777 46987778 C T 5 GENIC homozygous 53621234 9 46987875 46987876 A G 3 GENIC homozygous 52471623 9 46987923 46987924 A AT 6 GENIC homozygous 52199567 9 46987954 46987955 T C 10 GENIC homozygous 52199568 9 46988101 46988102 C T 2 GENIC homozygous 53621235 9 46988768 46988769 T A 6 GENIC homozygous 53621236 9 46988828 46988829 G T 5 GENIC homozygous 52199572 9 46988838 46988839 C T 6 GENIC homozygous 52199574 9 46988949 46988950 T G 16 GENIC homozygous 52199576 9 46989178 46989179 A G 11 GENIC homozygous 52199578 9 46989975 46989990 AATAATAATAATAAT --------------- 2 GENIC homozygous 53621237 9 46990252 46990253 T C 3 GENIC homozygous 51936131 9 46990254 46990255 T C 3 GENIC homozygous 51936134 9 46990258 46990259 T C 3 GENIC homozygous 51936137 9 46990261 46990262 T C 3 GENIC homozygous 51936140 9 46990278 46990279 G C 3 GENIC homozygous 51936143 9 46991165 46991166 A G 7 GENIC homozygous 52199582 9 46991591 46991592 T - 9 GENIC homozygous 51936146 9 46991604 46991605 T A 7 GENIC homozygous 51936149 9 46991695 46991696 C G 6 GENIC homozygous 51936152 9 46991699 46991700 A G 6 GENIC homozygous 52199586 9 46992342 46992343 T C 5 GENIC homozygous 52199588 9 46993722 46993723 T C 14 GENIC homozygous 52199596 9 46994232 46994233 C CAT 3 GENIC homozygous 52199598 9 46994492 46994493 T TACATACATACACACACACACACACACACACAC 3 GENIC heterozygous 53038425 9 46994492 46994493 T TACATACATACACACACACACACAC 3 GENIC heterozygous 53617682 9 46994829 46994830 T A 14 GENIC homozygous 52199604 9 46994927 46994928 A C 5 GENIC homozygous 52199606 9 46995101 46995102 A G 7 GENIC homozygous 52199608 9 46995199 46995200 G A 6 GENIC homozygous 52199610 9 46995242 46995243 G A 7 GENIC homozygous 52199612 9 46995875 46995876 T C 4 GENIC homozygous 52199614 9 46995877 46995878 C G 4 GENIC homozygous 52199616 9 46995912 46995913 A G 3 GENIC homozygous 52199620 9 46995981 46995982 T C 7 GENIC homozygous 52199622 9 46996070 46996071 G A 14 GENIC homozygous 52199624 9 46996413 46996414 T C 12 GENIC homozygous 52199626 9 46997030 46997031 A C 6 GENIC homozygous 52199628 9 46997229 46997230 G GT 5 GENIC homozygous 53621238 9 46997353 46997354 C A 5 GENIC homozygous 52199630 9 46997421 46997422 C A 7 GENIC homozygous 51936155 9 46997440 46997441 G - 6 GENIC homozygous 51936158 9 46997470 46997471 C - 1 GENIC homozygous 51936170 9 46997457 46997458 A - 2 GENIC homozygous 51936164 9 46997466 46997467 G - 2 GENIC homozygous 51936167 9 46977385 46977386 C CTTTTT 1 GENIC homozygous 52906411 9 46986549 46986551 AC -- 2 GENIC homozygous 52906412 9 46991321 46991323 TG -- 3 GENIC heterozygous 52906414 9 46997447 46997448 G GTT 5 GENIC homozygous 52906415 9 46997451 46997454 AAA --- 2 GENIC homozygous 52906416 9 46978635 46978651 TGTGTGTGTGTGTGTG ---------------- 3 GENIC homozygous 53408659 9 46997478 46997479 G - 1 GENIC homozygous 51936173 9 46997483 46997484 C T 1 GENIC homozygous 52199634 9 46997486 46997489 ATA --- 1 GENIC homozygous 52906417 9 46997492 46997494 AA -- 1 GENIC homozygous 52906418 9 46997509 46997510 G - 1 GENIC homozygous 52906421 9 46997515 46997516 G - 1 GENIC homozygous 52906422 9 46997520 46997521 G - 1 GENIC homozygous 52906423 9 46997522 46997523 G - 1 GENIC homozygous 52906424 9 46997525 46997526 G - 1 GENIC homozygous 52906425 9 46997527 46997528 G - 1 GENIC homozygous 52906426 9 46997529 46997530 G - 1 GENIC homozygous 52906427 9 46997532 46997533 G - 1 GENIC homozygous 52906428 9 46997534 46997535 G T 1 GENIC homozygous 52906429 9 46997545 46997546 C T 1 GENIC homozygous 52199638 9 46997549 46997552 GTG --- 1 GENIC homozygous 51936176 9 46997563 46997565 AG -- 4 GENIC homozygous 51936179 9 46997570 46997571 A - 4 GENIC homozygous 51936182 9 46997581 46997582 A - 6 GENIC homozygous 51936185 9 46997602 46997603 A - 7 GENIC homozygous 51936188 9 46997912 46997913 G GTA 7 GENIC heterozygous 53621239 9 46998017 46998018 G GTA 5 GENIC heterozygous 53621240 9 46998039 46998040 G GTGT 5 GENIC homozygous 53112304 9 46998746 46998747 A G 3 GENIC homozygous 52199644 9 46998801 46998802 G A 2 GENIC homozygous 52199646 9 46999001 46999002 A G 7 GENIC homozygous 52199648 9 46999189 46999190 C T 6 GENIC homozygous 53621241 9 46999404 46999405 G GTT 2 GENIC heterozygous 53038429 9 46999511 46999512 A G 7 GENIC homozygous 52199652 9 46999575 46999576 G A 4 GENIC homozygous 52199654 9 46999598 46999599 A G 3 GENIC homozygous 52199656 9 46999764 46999765 G T 3 GENIC homozygous 52199658 9 46999770 46999771 G A 3 GENIC homozygous 53621242 9 46999871 46999872 T - 7 GENIC homozygous 52199660 9 46999878 46999879 T A 9 GENIC homozygous 53621243 9 46999929 46999930 T C 10 GENIC homozygous 52199662 9 46999938 46999939 A T 11 GENIC homozygous 52199664 9 47000142 47000143 T G 5 GENIC homozygous 52199666 9 47000298 47000299 G A 6 GENIC homozygous 52199668 9 47000397 47000398 C T 8 GENIC homozygous 52199670 9 47000413 47000414 A G 6 GENIC homozygous 52199672 9 47000831 47000832 C T 5 GENIC homozygous 52199674 9 47001073 47001074 A T 2 GENIC homozygous 52199676 9 47001085 47001086 G C 1 GENIC homozygous 52199678 9 47001194 47001195 G A 4 GENIC homozygous 52199680 9 47001263 47001264 A G 1 GENIC homozygous 52199684 9 47001367 47001368 G A 6 GENIC homozygous 52199686 9 47001374 47001375 A G 6 GENIC homozygous 52199688 9 47001486 47001487 A G 8 GENIC homozygous 52199690 9 47001668 47001669 G GA 4 GENIC homozygous 52199692 9 47001689 47001690 T C 4 GENIC homozygous 52199694 9 47002531 47002532 A T 6 GENIC homozygous 52199706 9 47002105 47002106 C T 3 GENIC homozygous 53621244 9 47002374 47002375 C T 5 GENIC homozygous 52199700 9 47002530 47002531 C T 6 GENIC homozygous 52199704 9 46997536 46997537 G - 1 GENIC homozygous 52544087 9 47002805 47002806 T C 7 GENIC homozygous 52199708 9 47002837 47002838 T C 7 GENIC homozygous 52199710 9 47002926 47002927 A C 6 GENIC homozygous 52199712 9 47003162 47003163 A G 4 GENIC homozygous 52199714 9 47003287 47003288 T C 10 GENIC homozygous 52199716 9 47003297 47003298 A G 11 GENIC homozygous 52199718 9 47003443 47003444 C - 2 GENIC homozygous 52199720 9 47003615 47003616 G A 6 GENIC homozygous 52199722 9 47003684 47003685 T A 8 GENIC homozygous 52199724 9 47003797 47003798 C T 7 GENIC homozygous 52199726 9 47004073 47004091 TGTGTGTGTGTGTGTGTC ------------------ 5 GENIC homozygous 53621245 9 47004140 47004141 A - 4 GENIC homozygous 52199728 9 47004219 47004220 C G 2 GENIC homozygous 52199730 9 47004962 47004963 A G 6 GENIC homozygous 52199734 9 47005014 47005015 A G 7 GENIC homozygous 52199738 9 47005095 47005096 T G 3 GENIC homozygous 52199740 9 47005127 47005128 G A 4 GENIC homozygous 52199744 9 47005246 47005247 T C 11 GENIC homozygous 52199746 9 47005347 47005348 T TACACACACACAC 1 GENIC homozygous 53352875 9 47005403 47005404 A G 3 GENIC homozygous 52199750 9 47005493 47005494 T G 5 GENIC homozygous 52199752 9 47005565 47005566 T A 8 GENIC homozygous 52199754 9 47005990 47005991 T C 2 GENIC homozygous 52199758 9 47006036 47006037 C T 2 GENIC homozygous 52199760 9 47006247 47006248 A ATC 2 GENIC homozygous 53352879 9 47006253 47006263 ATGCAAAGCA ---------- 2 GENIC homozygous 52199764 9 47006570 47006571 C T 4 GENIC homozygous 52199770 9 47006637 47006638 T C 5 GENIC homozygous 52199772 9 47006755 47006756 T C 3 GENIC homozygous 52199776 9 47006813 47006814 C T 4 GENIC homozygous 52199778 9 47006872 47006873 C G 6 GENIC homozygous 52199780 9 47006883 47006884 A G 4 GENIC homozygous 52199782 9 47007421 47007422 C T 1 GENIC homozygous 52199784 9 47007635 47007636 A G 7 GENIC homozygous 52199786 9 47007640 47007641 A G 7 GENIC homozygous 52199788 9 47007955 47007956 T - 5 GENIC homozygous 52199790 9 47007961 47007962 T C 5 GENIC homozygous 52199792 9 47007966 47007967 T C 6 GENIC homozygous 52199794 9 47007975 47007976 G A 6 GENIC homozygous 52199796 9 47008019 47008020 G T 1 GENIC homozygous 52199798 9 47008115 47008116 G A 7 GENIC homozygous 53621246 9 47008287 47008288 G A 3 GENIC homozygous 52199800 9 47008459 47008460 C T 8 GENIC homozygous 53309462 9 47009163 47009164 T C 5 GENIC homozygous 52199802 9 47009515 47009516 A G 1 GENIC homozygous 52199804 9 47010505 47010506 T C 2 GENIC homozygous 52199808 9 47010709 47010710 T C 1 GENIC homozygous 52199812 9 47011324 47011325 G A 3 GENIC homozygous 52199814 9 47011620 47011621 C T 4 GENIC homozygous 53621247 9 47011785 47011786 A G 8 GENIC homozygous 52199816 9 47012446 47012447 T C 6 GENIC homozygous 52199818 9 47012573 47012574 C T 4 GENIC homozygous 52199820 9 47012643 47012644 G A 6 GENIC homozygous 52199822 9 47012788 47012792 TAAT ---- 8 GENIC homozygous 52199824 9 47012859 47012860 T - 6 GENIC homozygous 52199826 9 47012891 47012892 C T 6 GENIC homozygous 52199828 9 47013333 47013355 GTCAGCCTAGCACGTTCTTGGG ---------------------- 2 GENIC homozygous 52199830 9 47013383 47013388 TAGAG ----- 1 GENIC homozygous 52199832 9 47013655 47013656 T TG 6 GENIC homozygous 52199834 9 47013788 47013789 G C 10 GENIC homozygous 52199836 9 47013903 47013904 A G 5 GENIC homozygous 52199838 9 47013984 47013985 A C 13 GENIC homozygous 52199840 9 47014512 47014514 GC -- 6 GENIC homozygous 52853316 9 47014524 47014581 GTGTGCGTGCGTGTGTGTGTGTGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTG --------------------------------------------------------- 2 GENIC homozygous 53370320 9 47015532 47015533 T C 4 GENIC homozygous 52199854 9 47015901 47015902 T G 3 GENIC homozygous 52199856 9 47015932 47015933 A G 4 GENIC homozygous 52199858 9 47015994 47015995 G A 4 GENIC homozygous 52199860 9 47016094 47016095 A G 8 GENIC homozygous 52199862 9 47016147 47016148 T C 3 GENIC homozygous 53621248 9 47016613 47016614 T C 6 GENIC homozygous 52199870 9 47016134 47016135 C T 5 GENIC homozygous 52199864 9 47016171 47016172 T C 3 GENIC homozygous 52199866 9 47016287 47016288 G A 5 GENIC homozygous 52199868 9 47016614 47016615 C T 6 GENIC homozygous 52853320 9 47016683 47016684 A G 4 GENIC homozygous 52199872 9 47016806 47016807 C T 2 GENIC homozygous 52199874 9 47016964 47016965 G A 5 GENIC homozygous 52199876 9 47017088 47017125 GTCCCACAGTCCTTTGCTCCATAGGAAATAGCTCATC ------------------------------------- 3 GENIC homozygous 52853322 9 47017728 47017729 T C 6 GENIC homozygous 52199882 9 47017884 47017885 T G 10 GENIC homozygous 52199883 9 47018061 47018062 A G 9 GENIC homozygous 52199885 9 47018127 47018128 G A 5 GENIC homozygous 52199887 9 47018374 47018375 C T 5 INTERGENIC homozygous 52199889 9 47018442 47018447 ATAGA ----- 2 INTERGENIC homozygous 52199891 9 47018475 47018476 C G 3 INTERGENIC homozygous 52199893 9 47018550 47018551 G A 3 INTERGENIC heterozygous 52199895 9 47019248 47019249 T G 1 INTERGENIC homozygous 52199899 9 47019256 47019257 T A 1 INTERGENIC homozygous 52199901 9 47019372 47019373 G T 2 INTERGENIC homozygous 52199903 9 47019392 47019393 C T 2 INTERGENIC homozygous 52199905 9 47019507 47019508 A G 3 INTERGENIC homozygous 52199911 9 47019429 47019430 A AAG 3 INTERGENIC homozygous 53038437 9 47019457 47019458 A C 2 INTERGENIC homozygous 52199907 9 47019470 47019471 A AAAC 2 INTERGENIC homozygous 53621249 9 47019540 47019541 C T 3 INTERGENIC homozygous 52471635 9 47020040 47020041 C T 1 INTERGENIC homozygous 52199913 9 47020213 47020214 T A 7 INTERGENIC homozygous 52199915 9 47021429 47021430 G A 4 INTERGENIC homozygous 52199917 9 47021475 47021476 T C 3 INTERGENIC homozygous 52199919 9 47022035 47022036 A AT 2 INTERGENIC homozygous 52199923 9 47022981 47022982 C T 5 INTERGENIC homozygous 52199929 9 47023293 47023318 GAGCTGGGGCTGGGGGCTGGGAGGA ------------------------- 3 INTERGENIC homozygous 52853328 9 47023345 47023346 A G 5 INTERGENIC homozygous 52471638 9 47023463 47023464 C T 1 INTERGENIC homozygous 52199933 9 47024793 47024794 T C 9 INTERGENIC homozygous 52199941 9 47024294 47024295 T C 5 INTERGENIC homozygous 52199935 9 47024385 47024386 C G 8 INTERGENIC homozygous 52199937 9 47024479 47024480 A T 3 INTERGENIC homozygous 52199939 9 47024797 47024798 T C 10 INTERGENIC homozygous 52199943 9 47024807 47024808 T C 9 INTERGENIC homozygous 52199945 9 47024849 47024850 A C 8 INTERGENIC homozygous 52199947 9 47025953 47025954 T C 4 INTERGENIC homozygous 52199949 9 47026123 47026124 A AATGTGTGTGT 2 INTERGENIC heterozygous 53352881 9 47026124 47026125 A ATGTGTGTGTATG 2 INTERGENIC heterozygous 53621250 9 47026323 47026324 T A 5 INTERGENIC homozygous 51936212 9 47026324 47026325 G C 5 INTERGENIC homozygous 51936215 9 47026450 47026451 A G 2 INTERGENIC homozygous 52199953 9 47026451 47026452 G A 2 INTERGENIC homozygous 52199955 9 47026922 47026923 G A 3 INTERGENIC homozygous 52199957 9 47027176 47027177 T C 4 INTERGENIC homozygous 52199959 9 47027688 47027689 C T 4 INTERGENIC homozygous 52199961 9 47027731 47027732 G A 3 INTERGENIC homozygous 52199963 9 47028007 47028008 G GA 3 INTERGENIC homozygous 52199965 9 47028089 47028090 T C 6 INTERGENIC homozygous 52199967 9 47028236 47028303 TGCAGGAGAGAAGAGACCGGAGCTAGGAGGGAGAGAGAGAACATGGTGGCAGATGTTAAGATTTCTC ------------------------------------------------------------------- 2 INTERGENIC homozygous 52906432 9 47028672 47028673 T A 1 INTERGENIC homozygous 52199975 9 47028791 47028792 G A 7 INTERGENIC homozygous 52199977 9 47029328 47029329 A G 2 INTERGENIC homozygous 52199979 9 47030310 47030311 A G 5 INTERGENIC homozygous 52199981 9 47030879 47030880 C T 8 INTERGENIC homozygous 53621251 9 47031019 47031020 T C 5 INTERGENIC homozygous 52199983 9 47031344 47031345 T C 4 INTERGENIC homozygous 52199989 9 47031485 47031486 T C 1 INTERGENIC homozygous 52199991 9 47032370 47032371 C CT 9 INTERGENIC homozygous 52199993 9 47032475 47032476 T G 6 INTERGENIC homozygous 52199997 9 47032563 47032564 T C 8 INTERGENIC homozygous 53621252 9 47032893 47032894 G C 5 INTERGENIC homozygous 52199999 9 47032989 47032990 T C 2 INTERGENIC homozygous 52200001 9 47033010 47033012 GG -- 2 INTERGENIC homozygous 52200003 9 47033017 47033021 TCTG ---- 2 INTERGENIC homozygous 52200005 9 47033328 47033329 T TG 3 INTERGENIC homozygous 52200007 9 47033353 47033354 T TAGTC 3 INTERGENIC homozygous 52200009 9 47033482 47033483 G A 5 INTERGENIC homozygous 52200011 9 47033518 47033519 G T 3 INTERGENIC homozygous 52200013 9 47033602 47033603 G T 5 INTERGENIC homozygous 52200017 9 47033661 47033662 A T 11 INTERGENIC homozygous 52471642 9 47034142 47034143 T TAA 3 INTERGENIC homozygous 53621253 9 47034159 47034160 T A 3 INTERGENIC homozygous 52200021 9 47034370 47034371 A ACC 7 INTERGENIC homozygous 52200023 9 47034371 47034372 A C 7 INTERGENIC homozygous 52853334 9 47035168 47035169 C T 3 INTERGENIC homozygous 52200027 9 47035554 47035555 T C 2 INTERGENIC homozygous 53309489 9 47035573 47035574 G T 2 INTERGENIC homozygous 53309491 9 47035837 47035838 C A 10 INTERGENIC homozygous 52200031 9 47036075 47036076 A G 7 INTERGENIC homozygous 52200033 9 47036168 47036169 G A 3 INTERGENIC homozygous 52200035 9 47036313 47036314 G A 5 INTERGENIC homozygous 53621254 9 47036347 47036348 G T 3 INTERGENIC homozygous 53621255 9 47037010 47037011 C T 5 INTERGENIC homozygous 53621256 9 47037135 47037136 A G 8 INTERGENIC homozygous 53309492 9 47037232 47037233 T - 1 INTERGENIC homozygous 53621258