chr start stop reference nuc variant nuc depth genic status zygosity variant ID 9 46962538 46962539 C CT 12 INTERGENIC heterozygous 52199393 9 46962538 46962539 C CTTTT 12 INTERGENIC heterozygous 52471600 9 46962775 46962776 T A 17 INTERGENIC homozygous 52471601 9 46965376 46965377 C - 13 INTERGENIC heterozygous 52199407 9 46965392 46965394 CT -- 15 INTERGENIC heterozygous 51936109 9 46967146 46967147 A G 13 GENIC homozygous 52199420 9 46967717 46967718 C T 26 GENIC homozygous 52199426 9 46968305 46968306 A G 19 GENIC homozygous 52199428 9 46968547 46968548 G A 12 GENIC homozygous 52471602 9 46968847 46968848 G C 28 GENIC homozygous 52199432 9 46969092 46969093 G T 29 GENIC homozygous 52471603 9 46969399 46969400 T A 37 GENIC homozygous 52471604 9 46969723 46969724 C G 32 GENIC homozygous 52471605 9 46969740 46969741 C T 31 GENIC homozygous 52471606 9 46969959 46969960 G A 32 GENIC homozygous 52199440 9 46972994 46972995 G A 20 GENIC homozygous 52471607 9 46973347 46973348 A C 30 GENIC possibly homozygous 52199444 9 46973369 46973370 T C 37 GENIC heterozygous 52199446 9 46973376 46973377 G A 41 GENIC heterozygous 52199450 9 46973381 46973382 A G 42 GENIC heterozygous 52199452 9 46973384 46973385 A G 40 GENIC heterozygous 52199453 9 46973390 46973391 C T 32 GENIC heterozygous 52199455 9 46973394 46973395 C A 42 GENIC heterozygous 52199457 9 46973400 46973401 A G 40 GENIC heterozygous 52199459 9 46973409 46973410 T C 40 GENIC heterozygous 52199461 9 46973413 46973414 A G 38 GENIC heterozygous 52199463 9 46973414 46973415 C T 38 GENIC heterozygous 52471608 9 46973416 46973417 A G 41 GENIC heterozygous 52471609 9 46974365 46974366 G A 28 GENIC homozygous 52471610 9 46975406 46975407 T C 21 GENIC homozygous 52471611 9 46976938 46976939 T C 37 GENIC homozygous 52471612 9 46977386 46977390 TTTT ---- 8 GENIC heterozygous 52199471 9 46977443 46977444 C - 16 GENIC homozygous 52199473 9 46977446 46977452 AACACC ------ 16 GENIC homozygous 52199475 9 46977994 46977995 A C 32 GENIC homozygous 52199479 9 46978854 46978855 G A 22 GENIC homozygous 52471613 9 46979382 46979383 T C 25 GENIC homozygous 52471614 9 46979512 46979513 T G 19 GENIC homozygous 52471615 9 46979596 46979597 A G 16 GENIC homozygous 52199483 9 46980009 46980010 T C 22 GENIC homozygous 52471616 9 46980106 46980107 A T 15 GENIC homozygous 52471617 9 46980549 46980550 G A 11 GENIC homozygous 52199485 9 46980613 46980614 C T 24 GENIC homozygous 52199487 9 46980667 46980668 G A 28 GENIC homozygous 52199489 9 46980869 46980870 G T 28 GENIC homozygous 52199491 9 46980978 46980979 G A 42 GENIC homozygous 52471618 9 46981251 46981252 A G 26 GENIC homozygous 52199495 9 46981336 46981337 T G 21 GENIC homozygous 52199497 9 46981645 46981646 A C 27 GENIC possibly homozygous 52471619 9 46982971 46982972 G C 25 GENIC homozygous 52199518 9 46984797 46984798 G A 22 GENIC homozygous 52471620 9 46986551 46986553 AC -- 5 GENIC homozygous 52471621 9 46987270 46987271 C - 25 GENIC homozygous 52471622 9 46987571 46987572 T C 33 GENIC homozygous 52199561 9 46987575 46987576 G A 34 GENIC homozygous 52199563 9 46987875 46987876 A G 24 GENIC homozygous 52471623 9 46987923 46987924 A AT 32 GENIC homozygous 52199567 9 46987954 46987955 T C 24 GENIC homozygous 52199568 9 46988067 46988068 A G 30 GENIC heterozygous 51936112 9 46988504 46988505 G C 23 GENIC homozygous 52471624 9 46988776 46988777 G A 32 GENIC homozygous 52199570 9 46988828 46988829 G T 23 GENIC homozygous 52199572 9 46988838 46988839 C T 24 GENIC homozygous 52199574 9 46988949 46988950 T G 29 GENIC homozygous 52199576 9 46989178 46989179 A G 27 GENIC homozygous 52199578 9 46990158 46990159 T C 6 GENIC homozygous 51936118 9 46990159 46990160 T C 6 GENIC homozygous 51936121 9 46990161 46990162 T C 6 GENIC homozygous 51936125 9 46990252 46990253 T C 6 GENIC homozygous 51936131 9 46990254 46990255 T C 6 GENIC homozygous 51936134 9 46990258 46990259 T C 8 GENIC possibly homozygous 51936137 9 46990261 46990262 T C 8 GENIC homozygous 51936140 9 46990278 46990279 G C 10 GENIC homozygous 51936143 9 46991010 46991011 T C 22 GENIC homozygous 52199580 9 46991165 46991166 A G 17 GENIC homozygous 52199582 9 46991197 46991198 C T 18 GENIC homozygous 52199584 9 46991591 46991592 T - 39 GENIC homozygous 51936146 9 46991604 46991605 T A 38 GENIC homozygous 51936149 9 46991695 46991696 C G 45 GENIC homozygous 51936152 9 46991699 46991700 A G 46 GENIC homozygous 52199586 9 46992342 46992343 T C 29 GENIC homozygous 52199588 9 46992655 46992656 G A 15 GENIC homozygous 52199590 9 46992802 46992803 A G 22 GENIC homozygous 52199594 9 46993722 46993723 T C 22 GENIC homozygous 52199596 9 46994232 46994233 C CAT 22 GENIC possibly homozygous 52199598 9 46994254 46994255 C T 22 GENIC heterozygous 52199600 9 46994287 46994288 A G 18 GENIC possibly homozygous 52471625 9 46994496 46994497 C T 26 GENIC heterozygous 52199602 9 46994829 46994830 T A 18 GENIC homozygous 52199604 9 46994927 46994928 A C 20 GENIC homozygous 52199606 9 46995101 46995102 A G 13 GENIC homozygous 52199608 9 46995199 46995200 G A 7 GENIC homozygous 52199610 9 46995242 46995243 G A 9 GENIC homozygous 52199612 9 46995912 46995913 A G 27 GENIC homozygous 52199620 9 46995981 46995982 T C 30 GENIC homozygous 52199622 9 46996070 46996071 G A 28 GENIC homozygous 52199624 9 46996413 46996414 T C 30 GENIC homozygous 52199626 9 46997030 46997031 A C 9 GENIC homozygous 52199628 9 46997353 46997354 C A 11 GENIC homozygous 52199630 9 46997412 46997413 G A 7 GENIC homozygous 52199632 9 46997421 46997422 C A 7 GENIC homozygous 51936155 9 46997440 46997441 G - 7 GENIC homozygous 51936158 9 46997449 46997450 A - 6 GENIC homozygous 51936161 9 46997457 46997458 A - 5 GENIC homozygous 51936164 9 46997466 46997467 G - 6 GENIC homozygous 51936167 9 46997470 46997471 C - 6 GENIC homozygous 51936170 9 46997478 46997479 G - 6 GENIC homozygous 51936173 9 46997483 46997484 C T 6 GENIC homozygous 52199634 9 46997495 46997496 A T 2 GENIC homozygous 52199636 9 46997549 46997552 GTG --- 13 GENIC homozygous 51936176 9 46997563 46997565 AG -- 15 GENIC homozygous 51936179 9 46997570 46997571 A - 13 GENIC homozygous 51936182 9 46997581 46997582 A - 9 GENIC homozygous 51936185 9 46997602 46997603 A - 11 GENIC homozygous 51936188 9 46997914 46997915 G A 22 GENIC heterozygous 52199640 9 46998019 46998020 G A 25 GENIC heterozygous 52199642 9 46998039 46998040 G - 18 GENIC homozygous 51936191 9 46998039 46998040 G GT 17 GENIC homozygous 51936194 9 46999406 46999407 G T 18 GENIC heterozygous 52199650 9 46998746 46998747 A G 21 GENIC homozygous 52199644 9 46998801 46998802 G A 32 GENIC homozygous 52199646 9 46999001 46999002 A G 35 GENIC homozygous 52199648 9 46999511 46999512 A G 15 GENIC homozygous 52199652 9 46999575 46999576 G A 15 GENIC homozygous 52199654 9 46999598 46999599 A G 19 GENIC homozygous 52199656 9 46999764 46999765 G T 21 GENIC homozygous 52199658 9 46999871 46999872 T - 6 GENIC homozygous 52199660 9 46999929 46999930 T C 12 GENIC homozygous 52199662 9 46999938 46999939 A T 12 GENIC homozygous 52199664 9 47000142 47000143 T G 24 GENIC homozygous 52199666 9 47000298 47000299 G A 18 GENIC homozygous 52199668 9 47000397 47000398 C T 23 GENIC homozygous 52199670 9 47000413 47000414 A G 22 GENIC homozygous 52199672 9 47000831 47000832 C T 20 GENIC homozygous 52199674 9 47001073 47001074 A T 26 GENIC homozygous 52199676 9 47001085 47001086 G C 23 GENIC homozygous 52199678 9 47001194 47001195 G A 24 GENIC homozygous 52199680 9 47001263 47001264 A G 30 GENIC homozygous 52199684 9 47001367 47001368 G A 26 GENIC homozygous 52199686 9 47001374 47001375 A G 26 GENIC homozygous 52199688 9 47001486 47001487 A G 17 GENIC homozygous 52199690 9 47001668 47001669 G GA 31 GENIC homozygous 52199692 9 47001689 47001690 T C 39 GENIC homozygous 52199694 9 47002015 47002016 C G 22 GENIC homozygous 52199696 9 47002241 47002242 G A 21 GENIC homozygous 52199698 9 47002374 47002375 C T 27 GENIC homozygous 52199700 9 47002530 47002531 C T 26 GENIC homozygous 52199704 9 47002531 47002532 A T 26 GENIC homozygous 52199706 9 47002805 47002806 T C 27 GENIC homozygous 52199708 9 47002837 47002838 T C 25 GENIC homozygous 52199710 9 47002926 47002927 A C 21 GENIC homozygous 52199712 9 47003162 47003163 A G 31 GENIC homozygous 52199714 9 47003287 47003288 T C 34 GENIC homozygous 52199716 9 47003297 47003298 A G 34 GENIC homozygous 52199718 9 47003443 47003444 C - 19 GENIC homozygous 52199720 9 47003615 47003616 G A 26 GENIC homozygous 52199722 9 47003679 47003680 G C 30 GENIC homozygous 52471626 9 47003684 47003685 T A 33 GENIC homozygous 52199724 9 47003797 47003798 C T 18 GENIC homozygous 52199726 9 47003978 47003979 T C 8 GENIC homozygous 52471627 9 47004140 47004141 A - 25 GENIC homozygous 52199728 9 47004219 47004220 C G 13 GENIC homozygous 52199730 9 47004962 47004963 A G 18 GENIC homozygous 52199734 9 47005014 47005015 A G 15 GENIC homozygous 52199738 9 47005095 47005096 T G 38 GENIC homozygous 52199740 9 47005403 47005404 A G 19 GENIC homozygous 52199750 9 47005110 47005111 G A 35 GENIC homozygous 52199742 9 47005127 47005128 G A 33 GENIC homozygous 52199744 9 47005246 47005247 T C 12 GENIC homozygous 52199746 9 47005493 47005494 T G 24 GENIC homozygous 52199752 9 47005565 47005566 T A 22 GENIC homozygous 52199754 9 47005947 47005948 A G 20 GENIC homozygous 52199756 9 47005990 47005991 T C 18 GENIC homozygous 52199758 9 47006036 47006037 C T 23 GENIC homozygous 52199760 9 47006253 47006263 ATGCAAAGCA ---------- 3 GENIC homozygous 52199764 9 47006531 47006532 T C 10 GENIC homozygous 52199766 9 47006544 47006545 G C 17 GENIC homozygous 52199768 9 47006570 47006571 C T 24 GENIC homozygous 52199770 9 47006637 47006638 T C 29 GENIC homozygous 52199772 9 47006755 47006756 T C 33 GENIC homozygous 52199776 9 47006813 47006814 C T 28 GENIC homozygous 52199778 9 47006872 47006873 C G 23 GENIC homozygous 52199780 9 47006883 47006884 A G 25 GENIC homozygous 52199782 9 47007421 47007422 C T 35 GENIC homozygous 52199784 9 47007635 47007636 A G 22 GENIC homozygous 52199786 9 47007636 47007637 C T 22 GENIC homozygous 52471628 9 47007640 47007641 A G 22 GENIC homozygous 52199788 9 47007955 47007956 T - 25 GENIC homozygous 52199790 9 47007961 47007962 T C 29 GENIC homozygous 52199792 9 47007966 47007967 T C 30 GENIC homozygous 52199794 9 47007975 47007976 G A 27 GENIC homozygous 52199796 9 47008019 47008020 G T 21 GENIC homozygous 52199798 9 47008287 47008288 G A 30 GENIC homozygous 52199800 9 47009163 47009164 T C 29 GENIC homozygous 52199802 9 47009515 47009516 A G 37 GENIC homozygous 52199804 9 47010203 47010204 T TCC 10 GENIC possibly homozygous 52199806 9 47010505 47010506 T C 20 GENIC homozygous 52199808 9 47010654 47010655 C T 24 GENIC homozygous 52199810 9 47010709 47010710 T C 31 GENIC homozygous 52199812 9 47011324 47011325 G A 37 GENIC homozygous 52199814 9 47011785 47011786 A G 35 GENIC homozygous 52199816 9 47012446 47012447 T C 9 GENIC homozygous 52199818 9 47012573 47012574 C T 13 GENIC homozygous 52199820 9 47012643 47012644 G A 17 GENIC homozygous 52199822 9 47012788 47012792 TAAT ---- 12 GENIC homozygous 52199824 9 47012859 47012860 T - 8 GENIC homozygous 52199826 9 47012891 47012892 C T 18 GENIC homozygous 52199828 9 47013161 47013162 G A 16 GENIC homozygous 52471629 9 47013333 47013355 GTCAGCCTAGCACGTTCTTGGG ---------------------- 11 GENIC homozygous 52199830 9 47013383 47013388 TAGAG ----- 8 GENIC homozygous 52199832 9 47013655 47013656 T TG 26 GENIC homozygous 52199834 9 47013788 47013789 G C 27 GENIC homozygous 52199836 9 47013903 47013904 A G 30 GENIC homozygous 52199838 9 47013984 47013985 A C 23 GENIC homozygous 52199840 9 47014513 47014514 C T 29 GENIC homozygous 52199842 9 47014529 47014530 C T 16 GENIC possibly homozygous 52199844 9 47014533 47014534 C T 13 GENIC heterozygous 52199846 9 47014549 47014550 C T 11 GENIC heterozygous 52199848 9 47014580 47014581 G - 14 GENIC possibly homozygous 52199850 9 47014642 47014643 G A 26 GENIC possibly homozygous 52471630 9 47015532 47015533 T C 22 GENIC homozygous 52199854 9 47015901 47015902 T G 32 GENIC possibly homozygous 52199856 9 47015932 47015933 A G 34 GENIC homozygous 52199858 9 47015994 47015995 G A 38 GENIC homozygous 52199860 9 47016094 47016095 A G 32 GENIC homozygous 52199862 9 47016134 47016135 C T 30 GENIC homozygous 52199864 9 47016171 47016172 T C 25 GENIC homozygous 52199866 9 47016287 47016288 G A 34 GENIC homozygous 52199868 9 47016683 47016684 A G 37 GENIC homozygous 52199872 9 47016806 47016807 C T 37 GENIC homozygous 52199874 9 47016964 47016965 G A 27 GENIC homozygous 52199876 9 47017043 47017044 G C 25 GENIC homozygous 52471631 9 47017124 47017125 C CA 10 GENIC homozygous 52199878 9 47017284 47017285 C - 21 GENIC homozygous 52471632 9 47017527 47017528 A - 8 GENIC heterozygous 52471633 9 47017728 47017729 T C 16 GENIC homozygous 52199882 9 47017884 47017885 T G 9 GENIC homozygous 52199883 9 47018061 47018062 A G 24 GENIC homozygous 52199885 9 47018127 47018128 G A 19 GENIC homozygous 52199887 9 47018374 47018375 C T 23 INTERGENIC homozygous 52199889 9 47019248 47019249 T G 7 INTERGENIC homozygous 52199899 9 47018442 47018447 ATAGA ----- 7 INTERGENIC homozygous 52199891 9 47018475 47018476 C G 13 INTERGENIC homozygous 52199893 9 47018550 47018551 G A 12 INTERGENIC homozygous 52199895 9 47019256 47019257 T A 6 INTERGENIC homozygous 52199901 9 47019372 47019373 G T 9 INTERGENIC possibly homozygous 52199903 9 47019392 47019393 C T 9 INTERGENIC heterozygous 52199905 9 47019457 47019458 A C 11 INTERGENIC heterozygous 52199907 9 47019462 47019463 C CAAAA 10 INTERGENIC homozygous 51936203 9 47019470 47019471 A AAAAAC 9 INTERGENIC heterozygous 52199909 9 47019470 47019471 A AAAAC 9 INTERGENIC possibly homozygous 52471634 9 47019507 47019508 A G 14 INTERGENIC homozygous 52199911 9 47019540 47019541 C T 18 INTERGENIC homozygous 52471635 9 47020040 47020041 C T 23 INTERGENIC homozygous 52199913 9 47020213 47020214 T A 25 INTERGENIC homozygous 52199915 9 47021429 47021430 G A 25 INTERGENIC homozygous 52199917 9 47021475 47021476 T C 27 INTERGENIC homozygous 52199919 9 47021604 47021605 C T 20 INTERGENIC homozygous 52471636 9 47022035 47022036 A AT 17 INTERGENIC homozygous 52199923 9 47022346 47022347 T TCC 6 INTERGENIC homozygous 52199925 9 47022360 47022361 C T 19 INTERGENIC heterozygous 52199927 9 47022366 47022367 G A 17 INTERGENIC homozygous 52471637 9 47022981 47022982 C T 32 INTERGENIC homozygous 52199929 9 47023302 47023303 C A 11 INTERGENIC homozygous 52199931 9 47023345 47023346 A G 12 INTERGENIC homozygous 52471638 9 47023463 47023464 C T 23 INTERGENIC homozygous 52199933 9 47024294 47024295 T C 22 INTERGENIC homozygous 52199935 9 47024385 47024386 C G 30 INTERGENIC homozygous 52199937 9 47024479 47024480 A T 18 INTERGENIC homozygous 52199939 9 47024793 47024794 T C 18 INTERGENIC homozygous 52199941 9 47024797 47024798 T C 17 INTERGENIC homozygous 52199943 9 47024807 47024808 T C 18 INTERGENIC homozygous 52199945 9 47024849 47024850 A C 21 INTERGENIC homozygous 52199947 9 47025502 47025503 C G 29 INTERGENIC homozygous 52471639 9 47025942 47025943 C A 26 INTERGENIC homozygous 52471640 9 47025953 47025954 T C 23 INTERGENIC homozygous 52199949 9 47026134 47026135 G A 39 INTERGENIC heterozygous 52199951 9 47026323 47026324 T A 25 INTERGENIC homozygous 51936212 9 47026324 47026325 G C 26 INTERGENIC homozygous 51936215 9 47026922 47026923 G A 23 INTERGENIC homozygous 52199957 9 47027176 47027177 T C 24 INTERGENIC homozygous 52199959 9 47027632 47027633 G A 16 INTERGENIC homozygous 52471641 9 47027688 47027689 C T 15 INTERGENIC homozygous 52199961 9 47027731 47027732 G A 17 INTERGENIC homozygous 52199963 9 47028007 47028008 G GA 26 INTERGENIC homozygous 52199965 9 47028089 47028090 T C 28 INTERGENIC homozygous 52199967 9 47028672 47028673 T A 30 INTERGENIC homozygous 52199975 9 47028791 47028792 G A 22 INTERGENIC homozygous 52199977 9 47029328 47029329 A G 20 INTERGENIC possibly homozygous 52199979 9 47030310 47030311 A G 26 INTERGENIC possibly homozygous 52199981 9 47031019 47031020 T C 16 INTERGENIC homozygous 52199983 9 47031344 47031345 T C 31 INTERGENIC homozygous 52199989 9 47031485 47031486 T C 30 INTERGENIC homozygous 52199991 9 47032370 47032371 C CT 10 INTERGENIC possibly homozygous 52199993 9 47032370 47032371 C CTT 10 INTERGENIC heterozygous 52199995 9 47032475 47032476 T G 19 INTERGENIC homozygous 52199997 9 47032893 47032894 G C 21 INTERGENIC homozygous 52199999 9 47032989 47032990 T C 31 INTERGENIC homozygous 52200001 9 47033010 47033012 GG -- 20 INTERGENIC homozygous 52200003 9 47033017 47033021 TCTG ---- 19 INTERGENIC homozygous 52200005 9 47033328 47033329 T TG 14 INTERGENIC homozygous 52200007 9 47033353 47033354 T TAGTC 19 INTERGENIC homozygous 52200009 9 47033482 47033483 G A 23 INTERGENIC homozygous 52200011 9 47033518 47033519 G T 21 INTERGENIC homozygous 52200013 9 47033602 47033603 G T 19 INTERGENIC homozygous 52200017 9 47033661 47033662 A T 16 INTERGENIC homozygous 52471642 9 47034143 47034144 A - 11 INTERGENIC homozygous 52200019 9 47034159 47034160 T A 15 INTERGENIC homozygous 52200021 9 47034370 47034371 A ACC 23 INTERGENIC homozygous 52200023 9 47035168 47035169 C T 19 INTERGENIC homozygous 52200027 9 47035771 47035772 A G 16 INTERGENIC homozygous 52200029 9 47035837 47035838 C A 23 INTERGENIC homozygous 52200031 9 47036075 47036076 A G 19 INTERGENIC homozygous 52200033 9 47036168 47036169 G A 15 INTERGENIC homozygous 52200035 9 47036175 47036176 T C 17 INTERGENIC homozygous 52200037 9 47037180 47037181 T TTTTG 22 INTERGENIC homozygous 52471643 9 47037710 47037711 G A 22 INTERGENIC homozygous 52200041 9 47037507 47037508 T A 33 INTERGENIC homozygous 52471644