chr start stop reference nuc variant nuc depth genic status zygosity variant ID 8 55309165 55309166 G C 21 GENIC possibly homozygous 52641483 8 55311039 55311040 G A 20 GENIC possibly homozygous 52641485 8 55312142 55312143 C T 25 GENIC possibly homozygous 52641487 8 55312282 55312283 C G 18 GENIC homozygous 52641489 8 55312455 55312456 G T 16 GENIC possibly homozygous 52641491 8 55313159 55313160 T C 25 GENIC possibly homozygous 52641493 8 55313230 55313231 A C 14 GENIC homozygous 52641495 8 55317201 55317202 T G 24 GENIC possibly homozygous 52641497 8 55317971 55317972 G - 9 GENIC homozygous 52978110 8 55324778 55324779 A ATTCCCAGCAACCACATGGTGTCTCAAAACCATCTGTAATGAGATCTGATGCCCTCTTCTGGTGTGTCTGCAG 4 GENIC homozygous 53387724 8 55325045 55325046 C CA 15 GENIC possibly homozygous 53536384 8 55325439 55325440 G T 14 GENIC homozygous 52978135 8 55350957 55350959 CC -- 7 INTERGENIC homozygous 52641509 8 55325440 55325441 T A 14 GENIC homozygous 52978136 8 55333375 55333376 C CA 3 GENIC homozygous 53207315 8 55344618 55344619 G - 22 INTERGENIC homozygous 52641505 8 55351312 55351315 TCC --- 23 INTERGENIC possibly homozygous 52641511 8 55366816 55366817 G - 4 INTERGENIC heterozygous 52978234 8 55369875 55369876 A T 27 INTERGENIC possibly homozygous 52641517 8 55370990 55370991 C T 21 INTERGENIC possibly homozygous 52641519 8 55371078 55371079 C G 22 INTERGENIC possibly homozygous 52641521 8 55371112 55371113 T C 27 INTERGENIC possibly homozygous 52641523 8 55371130 55371131 C T 25 INTERGENIC possibly homozygous 52641525 8 55371773 55371774 C T 17 INTERGENIC homozygous 52641527 8 55371800 55371801 A G 23 INTERGENIC homozygous 52641529 8 55371859 55371860 C A 26 INTERGENIC homozygous 52641531 8 55373196 55373197 A G 18 INTERGENIC homozygous 52641535 8 55373636 55373637 T G 18 INTERGENIC possibly homozygous 52641536 8 55375318 55375319 T G 28 INTERGENIC possibly homozygous 52641542 8 55376180 55376181 G C 33 INTERGENIC possibly homozygous 52641544 8 55376427 55376428 A G 25 INTERGENIC homozygous 52641546 8 55376679 55376691 TCTCTCTCTCTC ------------ 7 INTERGENIC heterozygous 53575937 8 55376687 55376691 TCTC ---- 7 INTERGENIC possibly homozygous 53431898 8 55377816 55377818 TT -- 18 INTERGENIC homozygous 53536386 8 55378663 55378664 C CA 27 INTERGENIC homozygous 52641554 8 55380674 55380675 C CTT 16 INTERGENIC heterozygous 52641555 8 55380674 55380675 C CT 16 INTERGENIC heterozygous 53119905 8 55381409 55381410 G A 24 INTERGENIC possibly homozygous 52641557 8 55381414 55381415 T A 20 INTERGENIC possibly homozygous 52641559 8 55381421 55381422 C T 21 INTERGENIC possibly homozygous 53582518 8 55381819 55381820 C T 19 INTERGENIC homozygous 52641560 8 55382055 55382056 C T 32 INTERGENIC possibly homozygous 52641562 8 55382577 55382578 C CAA 6 INTERGENIC heterozygous 52978258 8 55382577 55382578 C CAAA 6 INTERGENIC heterozygous 53387730 8 55382606 55382607 G C 14 INTERGENIC possibly homozygous 52641566 8 55383027 55383028 T G 32 INTERGENIC homozygous 52641568 8 55383141 55383142 G A 33 INTERGENIC homozygous 52641570 8 55383179 55383180 A G 33 INTERGENIC homozygous 52641572 8 55383609 55383610 C T 22 INTERGENIC possibly homozygous 52641574 8 55383683 55383687 GGGT ---- 22 INTERGENIC possibly homozygous 52641576 8 55383765 55383766 T C 29 INTERGENIC possibly homozygous 52641578 8 55384060 55384061 T - 16 INTERGENIC homozygous 52641579 8 55384178 55384179 G A 16 INTERGENIC homozygous 52641583 8 55384488 55384489 G - 34 INTERGENIC homozygous 52641585 8 55384898 55384899 A G 29 INTERGENIC possibly homozygous 52641587 8 55385023 55385024 T A 21 INTERGENIC possibly homozygous 52641589 8 55385207 55385208 T C 16 INTERGENIC possibly homozygous 52641591 8 55385283 55385286 AAA --- 20 INTERGENIC possibly homozygous 53431904 8 55385284 55385285 A AGAAGAAG 21 INTERGENIC heterozygous 53387731 8 55385294 55385295 C T 18 INTERGENIC homozygous 52641595 8 55385370 55385371 A G 19 INTERGENIC homozygous 52641597 8 55385527 55385529 GT -- 11 INTERGENIC heterozygous 52641599 8 55386023 55386024 A T 18 INTERGENIC possibly homozygous 52641607 8 55386375 55386376 C CTTTTTTT 3 INTERGENIC homozygous 53387732 8 55386524 55386525 C T 20 INTERGENIC homozygous 52641612 8 55386636 55386637 T C 21 INTERGENIC homozygous 52641614 8 55386744 55386745 A G 24 INTERGENIC homozygous 52641616 8 55387248 55387249 T C 29 INTERGENIC homozygous 52641618 8 55387740 55387741 T G 34 INTERGENIC possibly homozygous 52641620 8 55387774 55387775 A G 28 INTERGENIC possibly homozygous 52641622 8 55388835 55388836 A - 24 INTERGENIC homozygous 52641624 8 55390127 55390128 T TCTTCCTTCCTTCCTTCCTTCCTCCCTTCCTTC 12 INTERGENIC homozygous 53604615 8 55390214 55390215 C CTT 8 INTERGENIC possibly homozygous 53563028 8 55390994 55390996 GA -- 3 INTERGENIC homozygous 53207359 8 55391765 55391766 G A 25 INTERGENIC possibly homozygous 52641636 8 55393399 55393400 G T 24 INTERGENIC possibly homozygous 52641641 8 55393433 55393434 A C 17 INTERGENIC homozygous 52641643 8 55394279 55394280 C - 31 INTERGENIC possibly homozygous 52641645 8 55394435 55394436 G A 18 INTERGENIC homozygous 52641647 8 55394649 55394650 G T 31 INTERGENIC possibly homozygous 52641649 8 55395283 55395284 T C 20 INTERGENIC homozygous 52641651 8 55396630 55396631 A G 14 INTERGENIC possibly homozygous 52641653 8 55396655 55396656 T C 15 INTERGENIC possibly homozygous 52641655 8 55396926 55396927 C T 30 INTERGENIC possibly homozygous 52641659 8 55396952 55396953 A G 21 INTERGENIC possibly homozygous 52641661 8 55396955 55396956 G A 23 INTERGENIC possibly homozygous 52641663 8 55397220 55397221 C T 21 INTERGENIC possibly homozygous 52641665 8 55397241 55397242 G A 22 INTERGENIC possibly homozygous 52641667 8 55397295 55397296 T C 33 INTERGENIC possibly homozygous 52641669 8 55397417 55397418 C T 20 INTERGENIC homozygous 52641671 8 55397426 55397427 A G 21 INTERGENIC homozygous 52641673 8 55397825 55397826 A G 26 INTERGENIC possibly homozygous 52641675 8 55397948 55397949 C CA 19 INTERGENIC homozygous 52641677 8 55397961 55397962 A G 23 INTERGENIC possibly homozygous 52641678 8 55397993 55397994 C A 23 INTERGENIC possibly homozygous 52641680 8 55398124 55398125 C CT 24 INTERGENIC homozygous 52641682 8 55398141 55398142 A G 30 INTERGENIC homozygous 52641684 8 55398247 55398248 A G 19 INTERGENIC possibly homozygous 52641686 8 55398314 55398315 G A 18 INTERGENIC possibly homozygous 52641687 8 55398611 55398612 T - 21 INTERGENIC possibly homozygous 52641696 8 55358177 55358178 G GATTTATTT 2 INTERGENIC homozygous 54146758 8 55398331 55398332 G A 12 INTERGENIC homozygous 52641689 8 55398347 55398348 A T 12 INTERGENIC possibly homozygous 52641691 8 55398361 55398362 C T 16 INTERGENIC possibly homozygous 52641692 8 55398477 55398478 G A 25 INTERGENIC possibly homozygous 52641694 8 55398648 55398649 A G 20 INTERGENIC possibly homozygous 52641698 8 55398704 55398705 T TC 35 INTERGENIC possibly homozygous 52641700 8 55398732 55398733 C T 27 INTERGENIC possibly homozygous 52641702 8 55398882 55398883 T TGCTTTTC 21 INTERGENIC possibly homozygous 52641703 8 55398935 55398936 A ATGGAGAAGCCAGAGTTTG 22 INTERGENIC homozygous 52641707 8 55398968 55398969 A C 15 INTERGENIC homozygous 52641709 8 55398985 55398986 A G 14 INTERGENIC possibly homozygous 52641711 8 55399544 55399545 A ACACACACACGCACG 4 INTERGENIC heterozygous 53575938 8 55399143 55399144 C T 15 INTERGENIC possibly homozygous 52641713 8 55399201 55399202 T C 14 INTERGENIC homozygous 52641715 8 55399471 55399472 T - 10 INTERGENIC possibly homozygous 52641717 8 55399650 55399651 C T 22 INTERGENIC homozygous 52641719 8 55399729 55399730 C T 25 INTERGENIC homozygous 52641721 8 55399784 55399785 A G 27 INTERGENIC homozygous 52641723 8 55399894 55399895 G A 26 INTERGENIC possibly homozygous 52641724 8 55399899 55399900 G T 27 INTERGENIC possibly homozygous 52641726 8 55399940 55399941 G A 28 INTERGENIC possibly homozygous 52641728 8 55399952 55399953 G A 29 INTERGENIC possibly homozygous 52641730 8 55400081 55400082 T C 33 INTERGENIC possibly homozygous 52641732 8 55400109 55400110 C T 28 INTERGENIC possibly homozygous 52641733 8 55400197 55400198 T TAAAA 23 INTERGENIC homozygous 52641735 8 55400254 55400255 T - 24 INTERGENIC possibly homozygous 52641737 8 55400256 55400258 AT -- 24 INTERGENIC possibly homozygous 52641739 8 55400272 55400273 C G 30 INTERGENIC possibly homozygous 52978293 8 55400275 55400276 C T 30 INTERGENIC possibly homozygous 52641741 8 55400302 55400303 G GGATGAC 31 INTERGENIC possibly homozygous 52641745 8 55400359 55400360 T G 42 INTERGENIC possibly homozygous 52641746 8 55401022 55401023 C T 30 INTERGENIC possibly homozygous 52641801 8 55401030 55401034 ACAC ---- 29 INTERGENIC possibly homozygous 52641803 8 55401163 55401164 A G 20 INTERGENIC possibly homozygous 52641805 8 55401184 55401185 T C 17 INTERGENIC possibly homozygous 53575941 8 55401225 55401231 AGAGAA ------ 7 INTERGENIC heterozygous 53460677 8 55401247 55401248 A G 15 INTERGENIC possibly homozygous 52641806 8 55401295 55401296 A C 27 INTERGENIC homozygous 52641808 8 55401324 55401325 A T 30 INTERGENIC homozygous 52641810 8 55401452 55401453 G A 17 INTERGENIC homozygous 52641812 8 55401461 55401462 A C 19 INTERGENIC homozygous 52641814 8 55401525 55401526 T TAAG 24 INTERGENIC homozygous 52641816 8 55401564 55401565 A G 24 INTERGENIC possibly homozygous 52641818 8 55401691 55401692 T C 21 INTERGENIC possibly homozygous 52641820 8 55401752 55401753 C T 21 INTERGENIC possibly homozygous 52641822 8 55401758 55401759 C T 25 INTERGENIC possibly homozygous 52641824 8 55401923 55401924 A ATCTGC 21 INTERGENIC homozygous 52641826 8 55402011 55402012 T C 24 INTERGENIC homozygous 52641828 8 55402719 55402720 T C 27 INTERGENIC homozygous 52641837 8 55402146 55402147 C T 28 INTERGENIC possibly homozygous 52641830 8 55402357 55402358 C T 16 INTERGENIC homozygous 52641831 8 55402404 55402405 C T 15 INTERGENIC homozygous 52641833 8 55402861 55402862 A T 20 INTERGENIC homozygous 52641839 8 55402935 55402936 A G 22 INTERGENIC homozygous 52641841 8 55402999 55403000 G A 22 INTERGENIC homozygous 52641842 8 55403103 55403104 C A 31 INTERGENIC possibly homozygous 52641844 8 55403625 55403626 T C 25 INTERGENIC homozygous 52641846 8 55403846 55403847 A G 26 INTERGENIC homozygous 52641856 8 55403871 55403872 G C 23 INTERGENIC homozygous 52641858 8 55404055 55404056 A G 34 INTERGENIC homozygous 52641860 8 55404059 55404060 A G 32 INTERGENIC homozygous 52641862 8 55404684 55404685 T C 23 INTERGENIC possibly homozygous 52641864 8 55404806 55404807 T C 20 INTERGENIC homozygous 52641866 8 55406566 55406573 GGGGAGT ------- 12 INTERGENIC possibly homozygous 52641872 8 55406632 55406633 A AATCT 12 INTERGENIC heterozygous 52641873