chr start stop reference nuc variant nuc depth genic status zygosity variant ID 8 104041716 104041717 G GGGAGAGTTAGAGGGGAGAGAAGGAGAGTTAGAGGAGAGGAGAGGGGAGGGGAGGGGAGAGAGAGAGGAGGAGGAGGGGGGAAGGGAGAGGAAGAGGAGGAGGAGGGGGGAAGGGAGAGAGGGAGAGGAAGAGGAGAGGGGAAGGGAGAGAA 5 GENIC heterozygous 53367125 8 104042511 104042512 G GC 3 GENIC heterozygous 52780251 8 104042521 104042522 G GC 3 GENIC homozygous 52780252 8 104042814 104042815 A ATG 3 GENIC heterozygous 52780253 8 104043324 104043325 G A 6 GENIC homozygous 52780254 8 104043383 104043384 G T 1 GENIC homozygous 53023344 8 104043563 104043564 C A 12 GENIC homozygous 52780256 8 104043785 104043786 A G 8 GENIC homozygous 52780257 8 104043875 104043876 T C 9 GENIC possibly homozygous 52780258 8 104043887 104043888 C T 8 GENIC homozygous 52780259 8 104045045 104045046 T C 13 GENIC heterozygous 52780260 8 104045706 104045707 G GT 13 GENIC homozygous 52780261 8 104045904 104045905 A G 14 GENIC possibly homozygous 52780262 8 104046020 104046021 A AAAG 4 GENIC homozygous 52780263 8 104046581 104046582 G A 12 GENIC homozygous 52780264 8 104046644 104046645 A AT 8 GENIC homozygous 52780265 8 104046660 104046661 C T 7 GENIC homozygous 52780266 8 104046934 104046935 C T 11 GENIC homozygous 52780267 8 104047167 104047168 C T 5 GENIC homozygous 52780268 8 104048038 104048039 G GCCTA 7 GENIC homozygous 52780269 8 104048115 104048116 A G 1 GENIC homozygous 52780271 8 104048328 104048329 A G 6 GENIC heterozygous 52780272 8 104048834 104048835 G A 14 GENIC homozygous 52780274 8 104049299 104049300 C T 3 GENIC homozygous 52780275 8 104049566 104049567 C - 1 GENIC homozygous 52780276 8 104050422 104050423 T C 13 GENIC possibly homozygous 52780277 8 104050569 104050570 G A 16 GENIC possibly homozygous 52780278 8 104050708 104050709 C CCG 2 GENIC homozygous 53406509 8 104050842 104050846 TTTC ---- 3 GENIC homozygous 52780282 8 104051239 104051240 G A 19 GENIC homozygous 52780284 8 104051498 104051499 G A 9 GENIC homozygous 52780285 8 104051533 104051534 T C 12 GENIC possibly homozygous 52780286 8 104051880 104051881 G A 4 GENIC homozygous 52780287 8 104051949 104051950 C T 8 GENIC homozygous 52780288 8 104052047 104052048 C T 6 GENIC heterozygous 52780289 8 104052097 104052098 C T 7 GENIC homozygous 52780290 8 104052102 104052103 G A 8 GENIC homozygous 52780291 8 104052305 104052306 G C 4 GENIC homozygous 52780292 8 104052413 104052414 T C 10 GENIC heterozygous 52780293 8 104052750 104052751 A G 8 GENIC possibly homozygous 52780294 8 104052805 104052806 A G 10 GENIC homozygous 52780295 8 104053002 104053003 C T 8 GENIC possibly homozygous 52780296 8 104053062 104053063 C G 12 GENIC homozygous 52780297 8 104053124 104053125 C T 18 GENIC homozygous 52780298 8 104053588 104053589 C T 12 GENIC homozygous 52780299 8 104053628 104053629 G A 11 GENIC homozygous 52780300 8 104054576 104054577 G A 16 GENIC possibly homozygous 52780301 8 104056214 104056215 G A 18 GENIC homozygous 52780302 8 104056494 104056495 G A 8 GENIC homozygous 52780303 8 104057085 104057086 A G 6 GENIC homozygous 52780304 8 104058165 104058166 T C 10 GENIC homozygous 52780305 8 104058260 104058261 T C 13 GENIC homozygous 52780306 8 104058650 104058651 A - 11 GENIC possibly homozygous 52780311 8 104058945 104058946 A G 12 GENIC homozygous 52780312 8 104059086 104059087 G T 12 GENIC possibly homozygous 52780313 8 104059713 104059714 A C 6 GENIC homozygous 52780314 8 104061566 104061567 T G 11 GENIC heterozygous 52780315 8 104063149 104063150 G A 12 GENIC homozygous 52780318 8 104066009 104066010 A AT 7 GENIC homozygous 52780325 8 104066133 104066134 C T 7 GENIC homozygous 52780326 8 104066563 104066564 A C 8 GENIC homozygous 52780327 8 104066873 104066874 T C 10 GENIC possibly homozygous 52780328 8 104066883 104066884 T A 11 GENIC homozygous 52780329 8 104067776 104067777 T C 11 GENIC homozygous 52780330 8 104068080 104068081 T C 13 GENIC heterozygous 52780331 8 104068122 104068123 C A 11 GENIC homozygous 52780332 8 104068267 104068268 A G 17 GENIC possibly homozygous 52780333 8 104072241 104072242 C G 9 GENIC homozygous 52780335 8 104075436 104075437 A C 6 GENIC heterozygous 52780336 8 104078436 104078437 A G 9 GENIC homozygous 52780339 8 104078641 104078642 C T 13 GENIC homozygous 52780340 8 104078833 104078834 T TA 4 GENIC homozygous 52780341 8 104079895 104079896 C A 15 GENIC homozygous 52780343 8 104080443 104080444 G A 7 GENIC homozygous 52780346 8 104080877 104080878 G C 13 GENIC possibly homozygous 52780347 8 104080911 104080912 G T 3 GENIC heterozygous 52780348 8 104081503 104081504 G T 10 GENIC homozygous 52780349 8 104081980 104081981 T G 15 GENIC possibly homozygous 52780350 8 104082238 104082239 A - 4 GENIC heterozygous 52780351 8 104083214 104083215 G T 10 GENIC homozygous 52780352 8 104085389 104085390 T C 18 GENIC homozygous 52780353 8 104085588 104085589 T C 9 GENIC possibly homozygous 52780354 8 104086465 104086466 T TA 5 GENIC heterozygous 52780356 8 104087048 104087049 T C 14 GENIC possibly homozygous 52780357 8 104087338 104087339 A G 15 GENIC possibly homozygous 52780358 8 104087587 104087588 A T 11 GENIC possibly homozygous 52780359 8 104087849 104087850 T C 14 GENIC homozygous 52780360 8 104087966 104087967 T TG 9 GENIC homozygous 52780361 8 104088020 104088021 A G 5 GENIC homozygous 52780362 8 104088158 104088159 A - 4 GENIC homozygous 52780363 8 104088641 104088642 G C 12 GENIC homozygous 52780366 8 104088882 104088883 T G 15 GENIC homozygous 52780371 8 104089096 104089097 G A 15 GENIC homozygous 52780372 8 104089937 104089938 T G 9 GENIC homozygous 52780373 8 104090508 104090509 A AC 3 GENIC heterozygous 52780376 8 104090537 104090538 C T 7 GENIC homozygous 52780377 8 104090595 104090596 C T 4 GENIC homozygous 52780378 8 104091635 104091636 C T 8 GENIC heterozygous 52780379 8 104092406 104092422 CTCTCTCTCTCTCTCT ---------------- 1 GENIC homozygous 53406521 8 104092702 104092703 A - 7 GENIC homozygous 52780385 8 104094562 104094566 ACAC ---- 7 GENIC possibly homozygous 52780386 8 104094661 104094664 AGA --- 8 GENIC homozygous 52780387 8 104097793 104097794 A G 11 GENIC homozygous 52780388 8 104097829 104097830 A AAAACAAAC 2 GENIC heterozygous 52780389 8 104099013 104099014 T C 12 GENIC homozygous 52780390 8 104099042 104099043 C T 11 GENIC heterozygous 52780391 8 104099582 104099583 G A 8 GENIC homozygous 52780392 8 104100631 104100632 A G 10 GENIC homozygous 52780393 8 104102320 104102321 G A 9 GENIC possibly homozygous 52780394 8 104103937 104103938 G A 9 GENIC possibly homozygous 52780398 8 104104450 104104451 A G 9 GENIC homozygous 52780399 8 104104625 104104626 A T 18 GENIC possibly homozygous 52780400 8 104104747 104104749 GG -- 5 GENIC heterozygous 53023359 8 104106171 104106172 A G 4 GENIC heterozygous 52780405 8 104106270 104106271 A AGT 1 GENIC homozygous 52780408 8 104107424 104107425 T C 11 GENIC possibly homozygous 52780414 8 104107774 104107775 G A 10 GENIC homozygous 52780415 8 104108841 104108842 G A 12 GENIC homozygous 52780416 8 104109705 104109706 T C 2 GENIC homozygous 52780417 8 104110760 104110761 A G 3 GENIC heterozygous 52780418 8 104110771 104110772 T A 5 GENIC heterozygous 52780419 8 104111091 104111092 G A 7 GENIC heterozygous 52780420 8 104111092 104111093 T C 7 GENIC heterozygous 52780421 8 104112357 104112358 A G 12 GENIC homozygous 52780422 8 104112436 104112437 A G 11 GENIC possibly homozygous 52780423 8 104112594 104112596 CC -- 9 GENIC homozygous 52780424 8 104112662 104112663 A T 9 GENIC homozygous 52780425 8 104112860 104112861 A - 12 GENIC homozygous 52780426 8 104112975 104112976 A G 14 GENIC homozygous 52780427 8 104113530 104113535 TTTGT ----- 6 GENIC heterozygous 52780428 8 104114095 104114096 G A 15 GENIC homozygous 52780429 8 104114147 104114148 T - 7 GENIC heterozygous 53367128 8 104114874 104114875 A C 4 GENIC heterozygous 52780431 8 104115114 104115115 C T 7 GENIC heterozygous 52780432 8 104115128 104115129 G A 6 GENIC homozygous 52780433 8 104115189 104115190 A C 13 GENIC homozygous 52780434 8 104115454 104115455 C G 3 GENIC homozygous 52780435 8 104115457 104115458 T C 3 GENIC homozygous 52780436 8 104115477 104115478 G A 10 GENIC possibly homozygous 52780437 8 104115583 104115584 A G 16 GENIC homozygous 52780438 8 104115766 104115767 C T 13 GENIC homozygous 52780439 8 104115948 104115949 A C 10 GENIC homozygous 52780440 8 104116090 104116091 A AG 6 GENIC homozygous 52780442 8 104116438 104116439 T A 7 GENIC homozygous 52780443 8 104116454 104116457 TTG --- 3 GENIC homozygous 52780444 8 104117691 104117692 C T 2 GENIC homozygous 52780445 8 104118683 104118684 A T 10 GENIC heterozygous 52780446 8 104120035 104120036 A G 7 GENIC homozygous 52780447 8 104121374 104121375 A G 14 GENIC possibly homozygous 52780448 8 104121515 104121516 T - 6 GENIC homozygous 52780449 8 104121632 104121633 C A 3 GENIC homozygous 52780452 8 104121661 104121662 A G 5 GENIC heterozygous 52780453 8 104121821 104121822 T TC 1 GENIC homozygous 52780459 8 104121967 104121968 C G 11 GENIC homozygous 52780460 8 104122119 104122120 T C 11 GENIC homozygous 52780461 8 104122169 104122170 T C 20 GENIC homozygous 52780462 8 104122326 104122327 C G 13 GENIC possibly homozygous 52780463 8 104122356 104122357 T C 15 GENIC possibly homozygous 52780464 8 104122450 104122451 C T 10 GENIC possibly homozygous 52780465 8 104122454 104122455 G A 9 GENIC homozygous 52780466 8 104122531 104122532 T C 8 GENIC homozygous 52780467 8 104122655 104122656 G A 13 GENIC homozygous 52780468 8 104122734 104122735 T C 16 GENIC possibly homozygous 52780469 8 104122822 104122823 G A 13 GENIC homozygous 52780470 8 104122844 104122845 C - 11 GENIC homozygous 52780471 8 104123299 104123300 A - 5 GENIC homozygous 52780475 8 104123512 104123513 T C 10 GENIC possibly homozygous 52780476 8 104124204 104124205 T C 8 GENIC homozygous 52780480 8 104124288 104124292 GTGT ---- 3 GENIC heterozygous 52780481 8 104124557 104124558 T C 2 GENIC heterozygous 52780482 8 104124700 104124701 T TTTTGG 5 GENIC homozygous 52780484 8 104125012 104125013 G A 12 GENIC homozygous 52780485 8 104125269 104125270 C T 4 GENIC homozygous 52780486 8 104125296 104125297 A G 8 GENIC homozygous 52780487 8 104125395 104125396 G A 5 GENIC homozygous 52780488 8 104125399 104125400 A C 6 GENIC homozygous 52780489 8 104125489 104125490 C T 17 GENIC possibly homozygous 52780490 8 104126024 104126025 A G 15 GENIC heterozygous 52780491 8 104126193 104126194 C T 6 GENIC homozygous 52780492 8 104126217 104126218 T C 6 GENIC heterozygous 52780493 8 104126349 104126350 G A 16 GENIC possibly homozygous 52780494 8 104126482 104126483 T C 5 GENIC homozygous 52780495 8 104126496 104126497 G GGAGAGACA 2 GENIC homozygous 52780496 8 104127290 104127291 G A 11 GENIC possibly homozygous 52780497 8 104127484 104127485 C A 11 GENIC homozygous 52780498 8 104128075 104128077 CC -- 6 GENIC homozygous 52780501 8 104128151 104128152 G T 5 GENIC homozygous 52780502 8 104128348 104128352 ACTA ---- 5 GENIC homozygous 52780503 8 104128615 104128616 G A 20 GENIC possibly homozygous 52780504 8 104128962 104128963 C G 13 GENIC possibly homozygous 52780505 8 104129393 104129394 T C 19 GENIC possibly homozygous 52780506 8 104129517 104129518 T C 23 GENIC possibly homozygous 52780507 8 104129693 104129694 C T 10 GENIC homozygous 52780508 8 104130288 104130289 C CA 10 GENIC homozygous 52780509 8 104131586 104131587 A G 24 GENIC possibly homozygous 52780511 8 104131984 104131985 T C 7 GENIC homozygous 52780512 8 104132057 104132058 G A 9 GENIC homozygous 52780513 8 104132134 104132135 C T 6 GENIC homozygous 52780514 8 104132772 104132773 C A 18 GENIC possibly homozygous 52780515 8 104134393 104134394 G A 10 GENIC heterozygous 52780517 8 104134782 104134783 T TAC 1 GENIC homozygous 52780520 8 104135288 104135289 T TG 5 GENIC homozygous 52780521 8 104136668 104136669 C A 12 GENIC homozygous 52780524 8 104139249 104139250 C - 2 GENIC heterozygous 52780526 8 104139261 104139263 AC -- 4 GENIC heterozygous 52780527 8 104140382 104140383 T - 3 GENIC heterozygous 52780532 8 104140907 104140908 C G 21 GENIC homozygous 52780533 8 104143837 104143838 C - 1 INTERGENIC homozygous 52780534 8 104143839 104143841 AC -- 1 INTERGENIC homozygous 52780535 8 104143877 104143878 C T 6 INTERGENIC homozygous 52780536 8 104146722 104146724 AG -- 8 INTERGENIC heterozygous 53367130 8 104148454 104148455 C T 4 INTERGENIC homozygous 52780537 8 104148672 104148673 G T 9 INTERGENIC homozygous 52780538 8 104149798 104149799 A G 11 INTERGENIC homozygous 52780543 8 104150268 104150269 T A 11 INTERGENIC homozygous 52780544 8 104150782 104150783 T - 9 INTERGENIC homozygous 52780545 8 104153771 104153772 C T 14 INTERGENIC possibly homozygous 52780547 8 104153805 104153806 G A 8 INTERGENIC homozygous 52780548 8 104156499 104156500 A C 11 INTERGENIC homozygous 52780550 8 104156519 104156520 G A 6 INTERGENIC heterozygous 52780551 8 104156588 104156589 C T 18 INTERGENIC possibly homozygous 52780552 8 104156730 104156731 T C 7 INTERGENIC homozygous 52780553 8 104158557 104158558 T C 6 INTERGENIC heterozygous 52780556 8 104159525 104159526 T C 11 INTERGENIC homozygous 52780568 8 104160746 104160747 A G 21 INTERGENIC homozygous 52780569 8 104160854 104160855 A AGACAG 1 INTERGENIC homozygous 52780570 8 104162081 104162082 C T 10 INTERGENIC homozygous 52780572 8 104163250 104163251 T C 19 INTERGENIC homozygous 52780575 8 104163393 104163394 C T 8 INTERGENIC homozygous 52780576 8 104164452 104164453 T TC 7 INTERGENIC homozygous 52780577 8 104164969 104164970 A G 15 INTERGENIC possibly homozygous 52780578 8 104165042 104165043 C T 9 INTERGENIC homozygous 52780579 8 104165094 104165095 T A 10 INTERGENIC homozygous 52780580 8 104166379 104166380 G GT 11 INTERGENIC homozygous 52780581 8 104166698 104166699 T C 16 INTERGENIC possibly homozygous 52780582 8 104166903 104166904 T C 5 INTERGENIC heterozygous 52780583 8 104167067 104167068 A T 14 INTERGENIC homozygous 52780584 8 104167540 104167541 C G 17 INTERGENIC homozygous 52780585 8 104169286 104169287 G C 3 INTERGENIC homozygous 52780589 8 104168062 104168063 A AC 10 INTERGENIC homozygous 52780586 8 104168697 104168698 T C 14 INTERGENIC homozygous 52780587 8 104169089 104169092 GGG --- 7 INTERGENIC heterozygous 52780588 8 104169360 104169361 T C 4 INTERGENIC homozygous 52780590 8 104169369 104169370 T TA 2 INTERGENIC homozygous 52780591 8 104169685 104169686 C G 6 INTERGENIC homozygous 52780593 8 104170084 104170085 T C 19 INTERGENIC homozygous 52780594 8 104170501 104170502 T C 3 INTERGENIC homozygous 52780595 8 104170862 104170863 G A 7 INTERGENIC homozygous 52780596 8 104171146 104171150 GAGA ---- 3 INTERGENIC heterozygous 52780597 8 104171473 104171474 T - 6 GENIC homozygous 52780598 8 104171671 104171672 A G 7 GENIC homozygous 52780599 8 104172194 104172195 G C 10 GENIC homozygous 52780600 8 104172238 104172239 T C 5 GENIC heterozygous 52780601 8 104173560 104173561 G A 9 GENIC homozygous 52780602 8 104173665 104173666 G T 9 GENIC homozygous 52780603 8 104173882 104173883 C T 3 GENIC heterozygous 52780604 8 104173923 104173924 C G 18 GENIC homozygous 52780605 8 104174183 104174184 C T 13 GENIC homozygous 52780606 8 104174254 104174255 T G 19 GENIC possibly homozygous 52780607 8 104175053 104175054 C T 13 GENIC homozygous 52780608 8 104176812 104176813 G A 15 GENIC possibly homozygous 52780609 8 104177105 104177106 T C 6 GENIC homozygous 52780610 8 104177363 104177364 C T 10 GENIC homozygous 52780611 8 104177518 104177519 A - 2 GENIC homozygous 52780612 8 104178802 104178803 G A 9 GENIC homozygous 52780613 8 104179636 104179637 G A 11 GENIC possibly homozygous 52780614 8 104179708 104179709 T C 3 GENIC homozygous 52780615 8 104180076 104180077 G A 7 GENIC possibly homozygous 52780616 8 104180294 104180295 T C 12 GENIC homozygous 52780617 8 104181057 104181058 A C 3 GENIC homozygous 52780618 8 104181129 104181130 T C 6 GENIC heterozygous 52780619