chr start stop reference nuc variant nuc depth genic status zygosity variant ID 8 55309165 55309166 G C 32 GENIC homozygous 52641483 8 55310688 55310689 C CTG 5 GENIC homozygous 52978082 8 55312455 55312456 G T 31 GENIC homozygous 52641491 8 55312791 55312792 C T 19 GENIC homozygous 52978083 8 55313159 55313160 T C 26 GENIC homozygous 52641493 8 55313230 55313231 A C 32 GENIC homozygous 52641495 8 55313251 55313252 C T 26 GENIC homozygous 52978084 8 55313786 55313787 C G 25 GENIC homozygous 52978085 8 55313821 55313822 T C 30 GENIC homozygous 52978086 8 55313947 55313948 T C 28 GENIC homozygous 52978087 8 55313957 55313958 A G 24 GENIC homozygous 52978088 8 55314097 55314098 A G 24 GENIC homozygous 52978089 8 55314158 55314159 C T 20 GENIC homozygous 52978090 8 55314204 55314205 A G 19 GENIC homozygous 52978091 8 55314880 55314881 A AGACTTTAAAAAGT 27 GENIC homozygous 52978092 8 55314932 55314933 C A 24 GENIC homozygous 52978093 8 55314992 55314993 A G 13 GENIC homozygous 52978094 8 55315206 55315207 G A 26 GENIC homozygous 52978095 8 55315372 55315373 T C 26 GENIC homozygous 52978096 8 55315716 55315717 C A 15 GENIC homozygous 52978097 8 55315868 55315869 A - 17 GENIC homozygous 52978098 8 55316063 55316064 T C 12 GENIC homozygous 52978099 8 55316187 55316188 G A 22 GENIC homozygous 52978100 8 55316623 55316624 C T 4 GENIC homozygous 52978101 8 55316836 55316837 T C 8 GENIC homozygous 52978103 8 55316940 55316941 T G 16 GENIC homozygous 52978104 8 55317201 55317202 T G 12 GENIC homozygous 52641497 8 55317234 55317235 C T 13 GENIC homozygous 52978105 8 55317261 55317262 C T 14 GENIC homozygous 52978106 8 55317421 55317422 T C 14 GENIC homozygous 52978107 8 55317440 55317441 T G 14 GENIC homozygous 52978108 8 55317586 55317587 A G 18 GENIC homozygous 52978109 8 55317971 55317972 G - 11 GENIC homozygous 52978110 8 55318085 55318086 A G 22 GENIC homozygous 52978111 8 55318661 55318662 C T 34 GENIC homozygous 52978112 8 55319063 55319064 G A 27 GENIC homozygous 52978113 8 55319100 55319101 A G 29 GENIC homozygous 52978114 8 55319318 55319319 G T 28 GENIC homozygous 52978115 8 55319442 55319443 T C 32 GENIC homozygous 52978116 8 55319729 55319730 T G 38 GENIC homozygous 52978117 8 55319910 55319911 C A 27 GENIC homozygous 52978118 8 55322713 55322714 C T 18 GENIC homozygous 52978125 8 55322827 55322828 G A 18 GENIC homozygous 52978126 8 55323005 55323006 C T 15 GENIC homozygous 52978127 8 55323510 55323511 G A 26 GENIC homozygous 52978128 8 55324049 55324050 C CA 34 GENIC homozygous 52978129 8 55324619 55324620 C T 17 GENIC homozygous 52978130 8 55324778 55324779 A ATTCCCCGCAACCACATGGTGTCTCAAAAACATCTGTAATGAGATCTGATGCCCTCTTCTGGTGTGTCTGCAG 2 GENIC homozygous 53431892 8 55322081 55322082 G GCACACACACACACACACACACACACACACACA 9 GENIC homozygous 53431884 8 55322576 55322577 G GTTT 13 GENIC homozygous 53431886 8 55322593 55322594 T TTTG 10 GENIC homozygous 53431888 8 55322598 55322599 G GTTTTGTTTTGTTTTTT 9 GENIC homozygous 53431890 8 55324885 55324886 T A 2 GENIC homozygous 52978131 8 55324917 55324918 G A 2 GENIC homozygous 52978132 8 55325045 55325046 C CAAA 3 GENIC homozygous 52978134 8 55325439 55325440 G T 17 GENIC homozygous 52978135 8 55325440 55325441 T A 17 GENIC homozygous 52978136 8 55333582 55333583 T C 28 GENIC homozygous 52978138 8 55334440 55334441 T C 17 GENIC homozygous 52978139 8 55334754 55334755 G T 29 GENIC homozygous 52978140 8 55335367 55335368 G A 25 GENIC homozygous 52978141 8 55335451 55335452 T C 27 GENIC homozygous 52978142 8 55335756 55335757 T C 23 GENIC homozygous 52978143 8 55337104 55337105 A G 26 GENIC homozygous 52978150 8 55337480 55337481 A G 29 INTERGENIC homozygous 52978151 8 55339157 55339158 A G 21 INTERGENIC homozygous 52978152 8 55339812 55339813 T C 43 INTERGENIC homozygous 52978153 8 55340026 55340027 A C 18 INTERGENIC homozygous 52978154 8 55340096 55340097 G A 16 INTERGENIC homozygous 52978155 8 55340101 55340102 A G 15 INTERGENIC homozygous 52978156 8 55340170 55340171 T C 18 INTERGENIC homozygous 52978157 8 55340209 55340210 C T 25 INTERGENIC homozygous 52978158 8 55340545 55340546 G C 29 INTERGENIC homozygous 52978159 8 55340646 55340647 T C 34 INTERGENIC homozygous 52978160 8 55341257 55341258 C A 24 INTERGENIC homozygous 52978161 8 55342269 55342270 C T 23 INTERGENIC homozygous 52978162 8 55342950 55342951 G A 18 INTERGENIC homozygous 52978163 8 55343258 55343259 A - 24 INTERGENIC homozygous 52978164 8 55343260 55343261 T TGG 25 INTERGENIC homozygous 52978165 8 55343570 55343571 T C 12 INTERGENIC homozygous 52978166 8 55344198 55344199 T C 23 INTERGENIC homozygous 52978168 8 55344231 55344232 A C 22 INTERGENIC homozygous 52978169 8 55344464 55344465 G T 33 INTERGENIC homozygous 52978170 8 55344494 55344495 G C 29 INTERGENIC homozygous 52978171 8 55344608 55344609 A G 27 INTERGENIC homozygous 52978172 8 55344616 55344619 GGG --- 26 INTERGENIC homozygous 52978173 8 55344741 55344742 T C 20 INTERGENIC homozygous 52978174 8 55344802 55344803 C T 35 INTERGENIC homozygous 52978175 8 55344871 55344872 T C 34 INTERGENIC homozygous 52978176 8 55344997 55344998 T A 30 INTERGENIC homozygous 52978177 8 55345319 55345320 T C 20 INTERGENIC homozygous 52978178 8 55345819 55345820 T C 27 INTERGENIC homozygous 52978179 8 55346266 55346267 T TTTTAGG 33 INTERGENIC homozygous 52978180 8 55346286 55346287 C T 33 INTERGENIC homozygous 52978181 8 55346496 55346497 A G 25 INTERGENIC homozygous 52978182 8 55347080 55347081 C A 28 INTERGENIC homozygous 52978183 8 55347516 55347517 T C 33 INTERGENIC homozygous 52978184 8 55347534 55347535 A G 31 INTERGENIC homozygous 52978185 8 55347742 55347743 C T 26 INTERGENIC homozygous 52978186 8 55347890 55347891 T C 23 INTERGENIC homozygous 52978187 8 55348052 55348053 C T 30 INTERGENIC homozygous 52978188 8 55348882 55348883 C T 25 INTERGENIC homozygous 52978189 8 55349402 55349403 C T 30 INTERGENIC homozygous 52978190 8 55349644 55349645 G T 16 INTERGENIC homozygous 52978191 8 55349938 55349939 A G 13 INTERGENIC homozygous 52978193 8 55350676 55350677 A T 20 INTERGENIC homozygous 52978197 8 55350118 55350119 C T 22 INTERGENIC homozygous 52978194 8 55350353 55350354 C T 20 INTERGENIC homozygous 52978195 8 55350575 55350576 G A 30 INTERGENIC possibly homozygous 52978196 8 55350725 55350726 G A 29 INTERGENIC homozygous 52978198 8 55350958 55350959 C - 12 INTERGENIC heterozygous 52978199 8 55351268 55351269 A T 3 INTERGENIC homozygous 53119893 8 55352108 55352109 C T 28 INTERGENIC homozygous 52978204 8 55352891 55352892 C T 22 INTERGENIC homozygous 52978205 8 55352892 55352893 A G 22 INTERGENIC homozygous 52978206 8 55353334 55353335 C CCT 3 INTERGENIC homozygous 53387727 8 55353505 55353506 C T 20 INTERGENIC homozygous 52978208 8 55353996 55353997 T C 31 INTERGENIC homozygous 52978209 8 55354636 55354637 G A 22 INTERGENIC homozygous 52978210 8 55354645 55354646 G A 21 INTERGENIC homozygous 52978211 8 55355334 55355335 T C 37 INTERGENIC homozygous 52978212 8 55355628 55355629 A T 22 INTERGENIC homozygous 52978213 8 55356494 55356495 A AG 20 INTERGENIC possibly homozygous 52978214 8 55357779 55357780 T TA 6 INTERGENIC homozygous 52978215 8 55357886 55357887 G A 13 INTERGENIC homozygous 52978216 8 55358104 55358105 G A 16 INTERGENIC homozygous 52978217 8 55358155 55358156 T A 6 INTERGENIC homozygous 52978218 8 55358925 55358926 C T 26 INTERGENIC homozygous 52978219 8 55360134 55360135 A T 30 INTERGENIC homozygous 52978220 8 55360324 55360325 C A 23 INTERGENIC homozygous 52978221 8 55360627 55360628 A G 33 INTERGENIC homozygous 52978222 8 55360628 55360629 A G 34 INTERGENIC homozygous 52978223 8 55360786 55360787 G A 16 INTERGENIC homozygous 52978224 8 55361366 55361367 C T 25 INTERGENIC homozygous 52978225 8 55361547 55361548 A G 17 INTERGENIC homozygous 52978226 8 55363374 55363375 A C 34 INTERGENIC homozygous 52978227 8 55365575 55365576 G GATACTA 7 INTERGENIC homozygous 53431894 8 55365766 55365767 T TGATGTC 36 INTERGENIC homozygous 52978232 8 55363853 55363854 A ACACGAAGC 33 INTERGENIC homozygous 52978228 8 55364746 55364747 G C 25 INTERGENIC homozygous 52978229 8 55365391 55365392 G - 7 INTERGENIC homozygous 52978230 8 55365764 55365765 A AT 37 INTERGENIC homozygous 52978231 8 55366816 55366817 G - 10 INTERGENIC homozygous 52978234 8 55366872 55366873 T C 16 INTERGENIC homozygous 52978235 8 55368980 55368981 T TC 17 INTERGENIC homozygous 52978236 8 55369411 55369412 G A 23 INTERGENIC homozygous 52978237 8 55369604 55369605 G C 19 INTERGENIC homozygous 52978238 8 55369936 55369937 T C 21 INTERGENIC homozygous 52978239 8 55370188 55370189 C T 23 INTERGENIC homozygous 52978240 8 55370233 55370234 G A 26 INTERGENIC homozygous 53431896 8 55370990 55370991 C T 16 INTERGENIC homozygous 52641519 8 55371112 55371113 T C 31 INTERGENIC homozygous 52641523 8 55371130 55371131 C T 29 INTERGENIC homozygous 52641525 8 55371208 55371209 A AT 17 INTERGENIC homozygous 52978241 8 55371800 55371801 A G 18 INTERGENIC homozygous 52641529 8 55371859 55371860 C A 21 INTERGENIC homozygous 52641531 8 55372675 55372676 T A 26 INTERGENIC homozygous 52978242 8 55373258 55373259 A G 33 INTERGENIC homozygous 52978243 8 55373486 55373487 T - 29 INTERGENIC homozygous 52978244 8 55374077 55374078 C T 11 INTERGENIC homozygous 52978245 8 55374594 55374595 T - 18 INTERGENIC homozygous 52978246 8 55375892 55375893 A T 24 INTERGENIC homozygous 52978247 8 55376427 55376428 A G 30 INTERGENIC homozygous 52641546 8 55376687 55376691 TCTC ---- 14 INTERGENIC heterozygous 53431898 8 55376689 55376691 TC -- 14 INTERGENIC heterozygous 53431900 8 55377025 55377026 C T 32 INTERGENIC homozygous 52978250 8 55377814 55377815 A AT 12 INTERGENIC heterozygous 52978251 8 55378663 55378664 C CA 25 INTERGENIC homozygous 52641554 8 55378755 55378757 GC -- 19 INTERGENIC homozygous 52978252 8 55379740 55379741 G A 28 INTERGENIC homozygous 52978253 8 55379807 55379808 C T 25 INTERGENIC homozygous 52978254 8 55382577 55382578 C CAA 6 INTERGENIC heterozygous 52978258 8 55380324 55380325 C T 27 INTERGENIC homozygous 52978255 8 55380675 55380677 TT -- 15 INTERGENIC homozygous 52978256 8 55381421 55381425 CTGA ---- 19 INTERGENIC homozygous 52978257 8 55381819 55381820 C T 32 INTERGENIC homozygous 52641560 8 55382577 55382578 C CA 6 INTERGENIC heterozygous 52978259 8 55382606 55382607 G C 10 INTERGENIC homozygous 52641566 8 55383174 55383175 C T 28 INTERGENIC homozygous 52978260 8 55383179 55383180 A G 29 INTERGENIC homozygous 52641572 8 55383376 55383377 C T 29 INTERGENIC homozygous 52978261 8 55383422 55383423 T C 31 INTERGENIC homozygous 52978262 8 55383592 55383599 TGAGCTA ------- 22 INTERGENIC homozygous 52978263 8 55383609 55383610 C T 18 INTERGENIC homozygous 52641574 8 55383682 55383683 A - 4 INTERGENIC homozygous 52978264 8 55383686 55383687 T G 9 INTERGENIC homozygous 53431902 8 55384038 55384039 T C 24 INTERGENIC homozygous 52978265 8 55384898 55384899 A G 25 INTERGENIC homozygous 52641587 8 55385023 55385024 T A 29 INTERGENIC homozygous 52641589 8 55385071 55385072 A T 23 INTERGENIC homozygous 52978266 8 55385207 55385208 T C 16 INTERGENIC homozygous 52641591 8 55385283 55385286 AAA --- 26 INTERGENIC heterozygous 53431904 8 55385284 55385285 A AGAAGAAG 25 INTERGENIC heterozygous 53387731 8 55385294 55385295 C T 26 INTERGENIC homozygous 52641595 8 55385370 55385371 A G 21 INTERGENIC homozygous 52641597 8 55385526 55385527 C CGTGT 9 INTERGENIC heterozygous 53431906 8 55385526 55385527 C CGTGCGTGTGTGTGTGT 9 INTERGENIC heterozygous 53431908 8 55386070 55386071 G A 24 INTERGENIC homozygous 52978267 8 55386135 55386136 C T 28 INTERGENIC homozygous 52978268 8 55386210 55386211 T C 25 INTERGENIC homozygous 52978269 8 55386375 55386376 C CTT 6 INTERGENIC homozygous 52978270 8 55386636 55386637 T C 22 INTERGENIC homozygous 52641614 8 55386744 55386745 A G 33 INTERGENIC homozygous 52641616 8 55386875 55386879 GGGA ---- 39 INTERGENIC homozygous 53431910 8 55386878 55386879 A ATC 37 INTERGENIC homozygous 53431912 8 55386881 55386882 G C 39 INTERGENIC homozygous 52978272 8 55386998 55386999 C A 25 INTERGENIC homozygous 52978273 8 55387227 55387228 T A 23 INTERGENIC homozygous 52978274 8 55387238 55387239 C T 22 INTERGENIC homozygous 52978275 8 55387248 55387249 T C 23 INTERGENIC homozygous 52641618 8 55387701 55387702 G C 24 INTERGENIC homozygous 52978276 8 55387774 55387775 A G 36 INTERGENIC possibly homozygous 52641622 8 55388093 55388094 A T 22 INTERGENIC homozygous 52978277 8 55388835 55388836 A - 31 INTERGENIC homozygous 52641624 8 55390127 55390128 T TCTTCCTTCCTTCCTTCCTTCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC 2 INTERGENIC homozygous 53431914 8 55390214 55390218 CCTT ---- 8 INTERGENIC homozygous 53431916 8 55390262 55390266 CTTC ---- 8 INTERGENIC homozygous 53431918 8 55390395 55390396 A T 27 INTERGENIC homozygous 52978279 8 55390993 55390994 T TGA 7 INTERGENIC possibly homozygous 53387735 8 55390994 55390996 GA -- 7 INTERGENIC heterozygous 53207359 8 55392411 55392412 C CT 2 INTERGENIC homozygous 52641638 8 55393378 55393379 G T 8 INTERGENIC homozygous 52978280 8 55393394 55393395 T TGG 2 INTERGENIC homozygous 52978281 8 55394462 55394463 T TAAA 16 INTERGENIC homozygous 52978283 8 55395075 55395076 T TA 14 INTERGENIC homozygous 52978285 8 55395272 55395273 G A 22 INTERGENIC homozygous 52978286 8 55395283 55395284 T C 19 INTERGENIC homozygous 52641651 8 55395798 55395799 C T 19 INTERGENIC homozygous 52978287 8 55396630 55396631 A G 14 INTERGENIC homozygous 52641653 8 55396655 55396656 T C 14 INTERGENIC homozygous 52641655 8 55397295 55397296 T C 25 INTERGENIC homozygous 52641669 8 55397417 55397418 C T 31 INTERGENIC homozygous 52641671 8 55397426 55397427 A G 30 INTERGENIC homozygous 52641673 8 55397555 55397556 A G 33 INTERGENIC homozygous 52978288 8 55397639 55397640 C T 33 INTERGENIC homozygous 52978289 8 55397825 55397826 A G 24 INTERGENIC homozygous 52641675 8 55397948 55397949 C CA 18 INTERGENIC homozygous 52641677 8 55397961 55397962 A G 20 INTERGENIC homozygous 52641678 8 55397993 55397994 C A 18 INTERGENIC homozygous 52641680 8 55398124 55398125 C CT 18 INTERGENIC homozygous 52641682 8 55398141 55398142 A G 21 INTERGENIC homozygous 52641684 8 55398247 55398248 A G 19 INTERGENIC homozygous 52641686 8 55398314 55398315 G A 18 INTERGENIC homozygous 52641687 8 55398331 55398332 G A 18 INTERGENIC homozygous 52641689 8 55398347 55398348 A T 21 INTERGENIC homozygous 52641691 8 55398361 55398362 C T 19 INTERGENIC homozygous 52641692 8 55398477 55398478 G A 20 INTERGENIC homozygous 52641694 8 55398554 55398555 G A 26 INTERGENIC homozygous 52978290 8 55398611 55398612 T - 20 INTERGENIC homozygous 52641696 8 55398648 55398649 A G 24 INTERGENIC homozygous 52641698 8 55398704 55398705 T TC 29 INTERGENIC homozygous 52641700 8 55398732 55398733 C T 24 INTERGENIC homozygous 52641702 8 55398882 55398883 T TGCTTTTC 30 INTERGENIC homozygous 52641703 8 55398935 55398936 A ATGGAGAAGCCAGAGTTTG 28 INTERGENIC homozygous 52641707 8 55398968 55398969 A C 20 INTERGENIC homozygous 52641709 8 55398985 55398986 A G 19 INTERGENIC homozygous 52641711 8 55399143 55399144 C T 30 INTERGENIC homozygous 52641713 8 55399201 55399202 T C 27 INTERGENIC homozygous 52641715 8 55399471 55399472 T - 23 INTERGENIC homozygous 52641717 8 55399542 55399543 A ACACACACACACGCACG 17 INTERGENIC possibly homozygous 53431920 8 55399650 55399651 C T 32 INTERGENIC homozygous 52641719 8 55399729 55399730 C T 29 INTERGENIC homozygous 52641721 8 55399784 55399785 A G 29 INTERGENIC homozygous 52641723 8 55399894 55399895 G A 16 INTERGENIC homozygous 52641724 8 55399899 55399900 G T 16 INTERGENIC homozygous 52641726 8 55399940 55399941 G A 21 INTERGENIC homozygous 52641728 8 55400197 55400198 T TA 28 INTERGENIC homozygous 52978292 8 55399952 55399953 G A 21 INTERGENIC homozygous 52641730 8 55400081 55400082 T C 18 INTERGENIC homozygous 52641732 8 55400109 55400110 C T 26 INTERGENIC homozygous 52641733 8 55400254 55400255 T G 33 INTERGENIC possibly homozygous 53431922 8 55400257 55400258 T G 33 INTERGENIC possibly homozygous 53431924 8 55400272 55400273 C G 36 INTERGENIC homozygous 52978293 8 55400275 55400276 C T 35 INTERGENIC homozygous 52641741 8 55400302 55400303 G GGATGAC 33 INTERGENIC homozygous 52641745 8 55400359 55400360 T G 28 INTERGENIC homozygous 52641746 8 55401022 55401023 C T 19 INTERGENIC homozygous 52641801 8 55401030 55401034 ACAC ---- 20 INTERGENIC homozygous 52641803 8 55401163 55401164 A G 20 INTERGENIC homozygous 52641805 8 55401183 55401185 AT -- 15 INTERGENIC homozygous 53431926 8 55401247 55401248 A G 13 INTERGENIC homozygous 52641806 8 55401295 55401296 A C 28 INTERGENIC homozygous 52641808 8 55401324 55401325 A T 42 INTERGENIC homozygous 52641810 8 55401691 55401692 T C 27 INTERGENIC homozygous 52641820 8 55401452 55401453 G A 34 INTERGENIC homozygous 52641812 8 55401461 55401462 A C 34 INTERGENIC homozygous 52641814 8 55401564 55401565 A G 33 INTERGENIC homozygous 52641818 8 55401752 55401753 C T 31 INTERGENIC homozygous 52641822 8 55401758 55401759 C T 36 INTERGENIC homozygous 52641824 8 55401923 55401924 A ATCTGC 28 INTERGENIC homozygous 52641826 8 55402011 55402012 T C 32 INTERGENIC homozygous 52641828 8 55402146 55402147 C T 15 INTERGENIC homozygous 52641830 8 55402404 55402405 C T 15 INTERGENIC homozygous 52641833 8 55402643 55402644 T C 36 INTERGENIC homozygous 52641835 8 55402719 55402720 T C 35 INTERGENIC homozygous 52641837 8 55402861 55402862 A T 29 INTERGENIC homozygous 52641839 8 55402935 55402936 A G 25 INTERGENIC homozygous 52641841 8 55402999 55403000 G A 26 INTERGENIC homozygous 52641842 8 55403103 55403104 C A 11 INTERGENIC homozygous 52641844 8 55403697 55403699 AG -- 10 INTERGENIC homozygous 52978303 8 55403846 55403847 A G 26 INTERGENIC homozygous 52641856 8 55404108 55404109 T G 21 INTERGENIC homozygous 52978306 8 55404493 55404494 C T 18 INTERGENIC homozygous 52978307 8 55406564 55406571 GGGGGGA ------- 12 INTERGENIC homozygous 52641868