chr start stop reference nuc variant nuc depth genic status zygosity variant ID 8 52986441 52986442 T C 25 INTERGENIC homozygous 52630484 8 52987506 52987507 C CTGTG 3 INTERGENIC heterozygous 52630486 8 52987650 52987651 G A 16 INTERGENIC homozygous 53119168 8 52993593 52993594 T C 66 INTERGENIC homozygous 53119169 8 52993910 52993911 T A 59 INTERGENIC homozygous 52630500 8 52995661 52995662 T C 29 INTERGENIC homozygous 52630504 8 52996268 52996269 C T 43 INTERGENIC homozygous 53119170 8 53000268 53000269 A C 35 INTERGENIC homozygous 52630516 8 53002132 53002133 G GGAGA 2 INTERGENIC homozygous 52630520 8 53003634 53003635 A AT 12 INTERGENIC possibly homozygous 52975969 8 53003635 53003636 T - 12 INTERGENIC heterozygous 52630526 8 53004297 53004298 G A 26 INTERGENIC homozygous 53119171 8 53004304 53004305 T C 27 INTERGENIC homozygous 52630528 8 53004925 53004926 C CATACAT 24 INTERGENIC homozygous 52630530 8 53005264 53005265 G C 40 INTERGENIC heterozygous 52975976 8 53008289 53008295 CACACA ------ 12 INTERGENIC heterozygous 52630550 8 53008500 53008501 C T 27 INTERGENIC homozygous 53119172 8 53008844 53008845 T A 25 INTERGENIC homozygous 52975989 8 53009366 53009367 G C 24 INTERGENIC homozygous 53119173 8 53009504 53009505 T C 27 INTERGENIC homozygous 53119174 8 53009840 53009841 C T 28 INTERGENIC heterozygous 53119175 8 53010111 53010112 C G 17 INTERGENIC homozygous 52630568 8 53010282 53010283 A G 22 INTERGENIC homozygous 53119176 8 53010317 53010318 C T 20 INTERGENIC homozygous 53119177 8 53010520 53010521 T C 37 INTERGENIC homozygous 52630572 8 53010550 53010551 G A 45 INTERGENIC homozygous 53119178 8 53010575 53010576 A C 35 INTERGENIC homozygous 53119179 8 53010609 53010610 A - 17 INTERGENIC homozygous 53119180 8 53010634 53010639 TCTTG ----- 16 INTERGENIC homozygous 53119181 8 53010648 53010649 T A 21 INTERGENIC homozygous 53119182 8 53010689 53010690 C A 29 INTERGENIC homozygous 53119183 8 53010941 53010942 G A 28 INTERGENIC possibly homozygous 53119184 8 53010942 53010943 C A 28 INTERGENIC possibly homozygous 53119185 8 53010944 53010945 G - 24 INTERGENIC homozygous 53119186 8 53011329 53011330 A C 23 INTERGENIC homozygous 52630578 8 53011449 53011450 G A 21 INTERGENIC homozygous 53119187 8 53011507 53011508 T C 32 INTERGENIC homozygous 52630580 8 53011536 53011537 G C 30 INTERGENIC homozygous 53119188 8 53011736 53011737 T - 26 INTERGENIC homozygous 53119189 8 53011803 53011804 G A 36 INTERGENIC heterozygous 52630584 8 53011845 53011846 T G 26 INTERGENIC homozygous 52630586 8 53012312 53012313 G A 18 INTERGENIC homozygous 53119190 8 53012459 53012460 C G 27 INTERGENIC homozygous 53119191 8 53012596 53012597 G GT 14 INTERGENIC possibly homozygous 52975995 8 53012736 53012737 T C 24 INTERGENIC homozygous 52630590 8 53012796 53012797 A G 33 INTERGENIC homozygous 52630592 8 53013116 53013117 T C 24 INTERGENIC homozygous 52630594 8 53013648 53013649 G GC 30 INTERGENIC homozygous 53119192 8 53013863 53013864 A G 25 INTERGENIC homozygous 52630598 8 53013979 53013980 G A 16 INTERGENIC homozygous 53119193 8 53013996 53013997 T A 19 INTERGENIC homozygous 53119194 8 53014003 53014004 G A 24 INTERGENIC homozygous 52630600 8 53014181 53014182 C T 40 INTERGENIC homozygous 52975997 8 53014183 53014184 A G 39 INTERGENIC homozygous 53119195 8 53014292 53014293 G A 23 INTERGENIC homozygous 52975999 8 53014573 53014574 C T 21 INTERGENIC homozygous 53119196 8 53014606 53014607 A G 24 INTERGENIC homozygous 53119197 8 53014644 53014662 CGTCATTGGTCCTTCCAA ------------------ 24 INTERGENIC homozygous 53119198 8 53014891 53014892 C A 26 INTERGENIC homozygous 52630604 8 53014945 53014946 G A 20 INTERGENIC homozygous 53119199 8 53016390 53016391 A G 23 INTERGENIC homozygous 52976001 8 53016872 53016876 CACA ---- 23 INTERGENIC heterozygous 52976003 8 53016874 53016876 CA -- 23 INTERGENIC possibly homozygous 52630608 8 53016956 53016957 C T 26 INTERGENIC heterozygous 53119200 8 53016956 53016957 C CAT 18 INTERGENIC heterozygous 53119201 8 53017209 53017210 T C 20 INTERGENIC homozygous 53119202 8 53017311 53017312 A G 27 INTERGENIC homozygous 52630610 8 53017657 53017658 G A 30 INTERGENIC homozygous 53119203 8 53017680 53017681 A G 27 INTERGENIC homozygous 53119204 8 53017854 53017855 A T 14 INTERGENIC homozygous 53119205 8 53018549 53018550 A C 9 INTERGENIC homozygous 52630614 8 53018726 53018727 G GATATGGAAAAGTGAA 1 INTERGENIC homozygous 53119206 8 53018844 53018845 A G 16 INTERGENIC homozygous 53119207 8 53018863 53018864 C T 20 INTERGENIC homozygous 53119208 8 53019236 53019237 A G 26 INTERGENIC homozygous 52630616 8 53019348 53019349 G A 22 INTERGENIC homozygous 53119209 8 53019511 53019512 G A 13 INTERGENIC homozygous 53119210 8 53020067 53020068 C T 25 INTERGENIC homozygous 52630618 8 53020119 53020120 C A 23 INTERGENIC homozygous 53119211 8 53020882 53020884 AC -- 8 INTERGENIC possibly homozygous 53119212 8 53020905 53020906 C CA 9 INTERGENIC homozygous 52630624 8 53020917 53020921 ATAA ---- 1 INTERGENIC homozygous 52630626 8 53021035 53021036 C T 14 INTERGENIC homozygous 52630628 8 53021068 53021069 G A 16 INTERGENIC homozygous 53119213 8 53021418 53021419 C T 5 INTERGENIC homozygous 53119214 8 53021664 53021665 G C 6 INTERGENIC heterozygous 52976006 8 53021757 53021758 T - 5 INTERGENIC heterozygous 52630630 8 53022299 53022300 A AT 13 INTERGENIC homozygous 52630636 8 53022634 53022635 T C 14 INTERGENIC homozygous 53119218 8 53022335 53022336 T C 14 INTERGENIC homozygous 53119215 8 53022432 53022433 G A 14 INTERGENIC homozygous 53119216 8 53022567 53022568 T G 14 INTERGENIC homozygous 53119217 8 53022946 53022947 G T 14 INTERGENIC homozygous 53119219 8 53022965 53022966 T C 20 INTERGENIC homozygous 53119220 8 53023677 53023678 A G 15 INTERGENIC homozygous 52630640 8 53024050 53024051 C A 21 INTERGENIC homozygous 53119221 8 53024408 53024409 C T 13 INTERGENIC homozygous 53119222 8 53025299 53025300 C T 27 INTERGENIC homozygous 52630652 8 53026041 53026042 C T 17 INTERGENIC homozygous 53119223 8 53026228 53026229 G GA 17 INTERGENIC homozygous 52630662 8 53026834 53026835 C T 27 INTERGENIC possibly homozygous 52630666 8 53027114 53027115 T TGG 6 INTERGENIC homozygous 52630670 8 53028090 53028091 T C 23 INTERGENIC homozygous 53119224 8 53028346 53028347 C T 12 INTERGENIC homozygous 53119225 8 53028610 53028611 T A 12 INTERGENIC homozygous 52630684 8 53028746 53028747 T C 19 INTERGENIC homozygous 52630686 8 53029642 53029643 T C 24 INTERGENIC homozygous 53119226 8 53029768 53029769 A G 21 INTERGENIC homozygous 53119227 8 53029871 53029872 A G 14 INTERGENIC homozygous 53119228 8 53029914 53029915 A AG 14 INTERGENIC homozygous 53119229 8 53030194 53030195 G A 16 INTERGENIC homozygous 52630694 8 53030493 53030494 T C 15 INTERGENIC homozygous 52630696 8 53031378 53031379 G GA 36 INTERGENIC homozygous 52630702 8 53032744 53032745 G C 27 INTERGENIC homozygous 52630712 8 53032770 53032771 C T 22 INTERGENIC homozygous 53119230 8 53032965 53032966 C T 23 INTERGENIC homozygous 53119231 8 53033658 53033659 T C 24 INTERGENIC homozygous 52630720 8 53033659 53033660 T C 24 INTERGENIC homozygous 52630722 8 53033969 53033970 G A 27 INTERGENIC homozygous 53119232 8 53034032 53034033 A ATGCCTATGGGGTTATTT 17 INTERGENIC homozygous 52630724 8 53034033 53034034 T TG 23 INTERGENIC possibly homozygous 52630726 8 53034364 53034365 A G 17 INTERGENIC homozygous 52630728 8 53036081 53036082 A T 29 INTERGENIC homozygous 53119233 8 53036230 53036231 T C 33 INTERGENIC homozygous 52630736 8 53036253 53036254 A G 36 INTERGENIC homozygous 52630738 8 53036473 53036474 A G 29 INTERGENIC homozygous 52630740 8 53036954 53036955 C T 20 INTERGENIC homozygous 53119234 8 53037080 53037081 A T 23 INTERGENIC homozygous 53119235 8 53041710 53041712 GG -- 5 INTERGENIC homozygous 53119236 8 53041948 53041949 A G 12 INTERGENIC homozygous 52630774 8 53041964 53041965 A G 13 INTERGENIC homozygous 52630776 8 53041991 53041992 A G 14 INTERGENIC homozygous 53119237 8 53042192 53042193 A G 22 INTERGENIC homozygous 52630778 8 53042491 53042492 C - 11 INTERGENIC homozygous 53119238 8 53042512 53042513 T TC 13 INTERGENIC homozygous 52630780 8 53043071 53043072 C T 21 INTERGENIC homozygous 52630782 8 53043072 53043073 C T 22 INTERGENIC homozygous 53119239 8 53043194 53043195 C T 16 INTERGENIC homozygous 53119240 8 53043359 53043360 G A 12 INTERGENIC homozygous 52630784 8 53044661 53044662 G A 7 INTERGENIC homozygous 52630788 8 53046358 53046360 TG -- 1 INTERGENIC homozygous 52630790 8 53046375 53046377 AT -- 1 INTERGENIC homozygous 52630792 8 53049020 53049021 T C 23 INTERGENIC homozygous 52630796 8 53049198 53049199 G C 24 INTERGENIC homozygous 52630798 8 53049430 53049431 G A 11 INTERGENIC homozygous 53119241 8 53049538 53049539 A G 13 INTERGENIC homozygous 53119242 8 53049818 53049819 G T 22 INTERGENIC homozygous 52630802 8 53049882 53049883 A C 15 INTERGENIC homozygous 52630804 8 53050364 53050365 T C 12 INTERGENIC homozygous 52630806 8 53050629 53050630 C T 21 INTERGENIC homozygous 52630808 8 53050666 53050667 T C 16 INTERGENIC homozygous 52630810 8 53051151 53051152 C CAG 27 INTERGENIC homozygous 52630812 8 53051218 53051219 G T 22 INTERGENIC homozygous 52630814 8 53053812 53053816 CTCT ---- 3 INTERGENIC homozygous 52976018 8 53053813 53053814 T - 5 INTERGENIC homozygous 52976019 8 53053815 53053822 TCTCTCT ------- 4 INTERGENIC heterozygous 53119243 8 53056260 53056261 G A 51 INTERGENIC heterozygous 52976023 8 53056273 53056277 TGTG ---- 30 INTERGENIC heterozygous 52630820 8 53056384 53056385 A G 51 INTERGENIC heterozygous 52630829 8 53056400 53056401 G GTGTA 24 INTERGENIC heterozygous 52630831 8 53056436 53056437 G A 59 INTERGENIC heterozygous 53181955 8 53056520 53056521 A ATG 16 INTERGENIC heterozygous 52630837 8 53056527 53056529 TA -- 17 INTERGENIC heterozygous 52976026 8 53056563 53056567 TGTG ---- 10 INTERGENIC heterozygous 52976027 8 53056565 53056567 TG -- 10 INTERGENIC possibly homozygous 52976028 8 53056570 53056571 G A 44 INTERGENIC heterozygous 52976029 8 53056604 53056606 AA -- 16 INTERGENIC heterozygous 52630841 8 53056616 53056617 A ATG 15 INTERGENIC heterozygous 52630843 8 53056620 53056621 G A 30 INTERGENIC heterozygous 52630845 8 53056623 53056625 TA -- 15 INTERGENIC heterozygous 52976031 8 53056640 53056641 A G 26 INTERGENIC heterozygous 53119244 8 53067547 53067548 C A 39 INTERGENIC homozygous 52630849 8 53067631 53067632 C T 33 INTERGENIC homozygous 52630855 8 53070255 53070256 T A 21 INTERGENIC heterozygous 52630859 8 53070286 53070287 A T 18 INTERGENIC heterozygous 53119247 8 53070287 53070288 T C 19 INTERGENIC heterozygous 52630861 8 53070309 53070310 A T 19 INTERGENIC heterozygous 53119248 8 53070324 53070325 T A 17 INTERGENIC heterozygous 52630863 8 53070343 53070344 A C 23 INTERGENIC heterozygous 53181956 8 53070395 53070396 C T 41 INTERGENIC heterozygous 52630865 8 53070434 53070435 A AT 50 INTERGENIC heterozygous 52630867 8 53070490 53070491 C - 25 INTERGENIC heterozygous 53181957 8 53073010 53073011 G A 21 INTERGENIC homozygous 52976036 8 53080942 53080943 G C 17 INTERGENIC homozygous 52976037 8 53080988 53080989 A C 16 INTERGENIC homozygous 52976038 8 53082325 53082326 T C 9 INTERGENIC homozygous 53119249 8 53081456 53081457 T C 10 INTERGENIC homozygous 52630873 8 53081473 53081474 C T 9 INTERGENIC homozygous 52976039 8 53082272 53082286 TGTGTGTGTGTGTG -------------- 1 INTERGENIC homozygous 52630875 8 53082577 53082578 T - 6 INTERGENIC homozygous 53119250 8 53082617 53082618 T C 14 INTERGENIC homozygous 53119251 8 53082628 53082629 G T 11 INTERGENIC homozygous 53119252 8 53101539 53101540 C - 4 INTERGENIC homozygous 52630879 8 53101539 53101540 C CA 7 INTERGENIC homozygous 52630881 8 53101544 53101545 T G 3 INTERGENIC homozygous 52630883 8 53101657 53101659 AA -- 3 INTERGENIC homozygous 52630885 8 53101675 53101676 A G 6 INTERGENIC heterozygous 52630887 8 53102268 53102269 A - 5 INTERGENIC homozygous 52630891 8 53102377 53102378 G A 7 INTERGENIC homozygous 52630893 8 53102432 53102433 G T 6 INTERGENIC homozygous 52630895 8 53102570 53102574 TATA ---- 1 INTERGENIC homozygous 52976041 8 53102826 53102827 C T 11 INTERGENIC homozygous 52630899 8 53103328 53103329 G A 20 INTERGENIC homozygous 52630903 8 53103526 53103527 C G 14 INTERGENIC homozygous 52630905 8 53103887 53103888 G A 16 INTERGENIC homozygous 53119253 8 53103911 53103912 A ATCAGTAGTAGAATGGT 7 INTERGENIC homozygous 52630907 8 53103991 53103992 A G 18 INTERGENIC homozygous 52630909 8 53104158 53104159 C T 29 INTERGENIC homozygous 52630911 8 53105089 53105090 T - 14 INTERGENIC homozygous 52630915 8 53105115 53105116 T - 13 INTERGENIC homozygous 52630917 8 53105129 53105130 G - 13 INTERGENIC homozygous 52630919 8 53105245 53105246 A AC 9 INTERGENIC homozygous 52630921 8 53105255 53105256 G - 7 INTERGENIC homozygous 52630923 8 53105256 53105257 G T 9 INTERGENIC heterozygous 53119254 8 53105282 53105283 A AG 6 INTERGENIC homozygous 52630925 8 53105299 53105300 C A 7 INTERGENIC homozygous 52630927 8 53105307 53105308 A AG 6 INTERGENIC homozygous 52630931 8 53105311 53105312 G C 6 INTERGENIC homozygous 52630933 8 53105334 53105335 T C 9 INTERGENIC homozygous 52630935 8 53105352 53105353 T TG 12 INTERGENIC homozygous 52630937 8 53105358 53105359 C A 13 INTERGENIC homozygous 52630939 8 53105371 53105372 T C 11 INTERGENIC homozygous 52630941 8 53105524 53105525 G A 24 INTERGENIC homozygous 52630943 8 53105587 53105588 G T 30 INTERGENIC homozygous 52630945 8 53105615 53105616 C G 23 INTERGENIC homozygous 52630947 8 53107365 53107366 T - 16 INTERGENIC homozygous 52630953 8 53108619 53108620 A T 20 INTERGENIC homozygous 53119255 8 53109312 53109313 A C 27 INTERGENIC homozygous 53119256 8 53109449 53109450 G A 18 INTERGENIC homozygous 52630973 8 53109510 53109511 T TA 16 INTERGENIC homozygous 52630975 8 53109523 53109524 A AAACC 21 INTERGENIC homozygous 53119257 8 53109526 53109527 A C 23 INTERGENIC heterozygous 53119258 8 53109669 53109670 A ATT 2 INTERGENIC heterozygous 52630985 8 53109679 53109680 T TTA 2 INTERGENIC heterozygous 52630989 8 53110724 53110725 C T 24 INTERGENIC homozygous 53119259 8 53111594 53111600 GTGTGT ------ 13 INTERGENIC possibly homozygous 53119260 8 53111953 53111954 A G 31 INTERGENIC homozygous 52631003 8 53111976 53111980 CACA ---- 8 INTERGENIC heterozygous 52631005 8 53111978 53111980 CA -- 8 INTERGENIC possibly homozygous 52631007 8 53112042 53112048 AGACAG ------ 13 INTERGENIC possibly homozygous 53119261 8 53112636 53112637 A - 13 INTERGENIC homozygous 52631009 8 53112863 53112864 A G 23 INTERGENIC homozygous 52631011 8 53113656 53113657 G A 33 INTERGENIC homozygous 53119262 8 53115049 53115053 TTCA ---- 11 INTERGENIC homozygous 52631027 8 53115763 53115764 T C 20 INTERGENIC homozygous 52631031 8 53115879 53115880 G T 23 INTERGENIC homozygous 53119263 8 53116131 53116132 C CCA 6 INTERGENIC heterozygous 53119264 8 53118743 53118749 GAGGAG ------ 5 INTERGENIC homozygous 53119265 8 53118844 53118852 AAAGAAAG -------- 8 INTERGENIC homozygous 53119266 8 53119937 53119938 T C 24 INTERGENIC homozygous 52631051 8 53120640 53120641 A AAC 9 INTERGENIC heterozygous 52631053 8 53120688 53120689 A AAC 18 INTERGENIC heterozygous 53119267 8 53120905 53120906 T C 32 INTERGENIC homozygous 53119268 8 53121023 53121024 T C 21 INTERGENIC homozygous 52631055 8 53122793 53122794 T G 24 INTERGENIC homozygous 53119269 8 53124465 53124466 A ACATGAAATATTTGGAGTAGCCGTCACTGGT 14 INTERGENIC homozygous 52631059 8 53126019 53126020 G C 10 INTERGENIC homozygous 53119270 8 53130501 53130502 C T 13 INTERGENIC homozygous 53119271 8 53130577 53130578 T C 17 INTERGENIC homozygous 53119272 8 53131576 53131577 G T 17 INTERGENIC homozygous 53119273 8 53132626 53132627 T C 28 INTERGENIC homozygous 52631071 8 53132856 53132857 T TA 6 INTERGENIC heterozygous 52976046 8 53133090 53133091 G - 26 INTERGENIC homozygous 52631075 8 53134088 53134107 AACAGAGAGAGAGAGAGAG ------------------- 7 INTERGENIC possibly homozygous 53119274 8 53138514 53138515 A G 28 INTERGENIC homozygous 52631085 8 53139669 53139670 G GTT 11 INTERGENIC homozygous 53119275 8 53139686 53139687 A C 15 INTERGENIC homozygous 53119276 8 53140084 53140085 T C 28 INTERGENIC homozygous 52631090 8 53140278 53140279 C T 22 INTERGENIC homozygous 52631094 8 53140379 53140380 T C 17 INTERGENIC homozygous 52631096 8 53141122 53141123 T G 23 INTERGENIC homozygous 53119277 8 53141260 53141261 G A 26 INTERGENIC homozygous 52631098 8 53142189 53142190 T - 13 INTERGENIC homozygous 52631104 8 53142470 53142471 A G 30 INTERGENIC homozygous 53119278 8 53142514 53142515 T G 29 INTERGENIC homozygous 52631106 8 53142724 53142725 G A 23 INTERGENIC homozygous 52631108 8 53143202 53143203 C T 21 INTERGENIC homozygous 52631114 8 53143969 53143970 G A 18 INTERGENIC homozygous 53119279 8 53144158 53144159 T G 23 INTERGENIC homozygous 53119280 8 53144267 53144268 C T 21 INTERGENIC homozygous 53119281 8 53144582 53144583 T C 28 INTERGENIC homozygous 52631120 8 53144765 53144766 C T 23 INTERGENIC homozygous 53119282 8 53144799 53144800 C T 22 INTERGENIC homozygous 53119283 8 53144979 53144980 T TTG 9 INTERGENIC homozygous 53119284 8 53145149 53145150 C CATAT 5 INTERGENIC homozygous 53119285 8 53145198 53145199 G GTA 17 INTERGENIC homozygous 53119286 8 53145279 53145280 A G 13 INTERGENIC homozygous 53119287 8 53145280 53145281 A C 13 INTERGENIC homozygous 53119288 8 53145838 53145841 TTT --- 13 INTERGENIC homozygous 53119289 8 53146297 53146298 A G 26 INTERGENIC homozygous 52631126 8 53146345 53146346 A G 26 INTERGENIC homozygous 53119290 8 53146454 53146455 T C 24 INTERGENIC homozygous 53119291 8 53146579 53146580 A AT 13 INTERGENIC homozygous 53119292