chr start stop reference nuc variant nuc depth genic status zygosity variant ID 7 54985194 54985195 G - 3 INTERGENIC homozygous 53929010 7 54985813 54985828 ATAGAATAGAATAGA --------------- 10 INTERGENIC homozygous 55724506 7 54986605 54986606 G GT 21 INTERGENIC possibly homozygous 55724512 7 54989274 54989275 C CATAT 2 INTERGENIC homozygous 55724515 7 54993875 54993891 CTATCTATCTATCTAT ---------------- 2 INTERGENIC homozygous 55724518 7 54996986 54996987 C CAGAG 3 INTERGENIC heterozygous 55724521 7 55001226 55001227 C T 19 GENIC homozygous 55661496 7 55001887 55001888 T - 30 GENIC possibly homozygous 55218185 7 55003950 55003951 C CA 5 GENIC homozygous 55141683 7 55012849 55012850 T C 17 GENIC possibly homozygous 55564843 7 54991527 54991528 A AT 13 INTERGENIC homozygous 54976700 7 54991529 54991530 A ATTTATTCTCTAACTAGACATGGACATCGGAATAAAAAATGGTGGGTTTGAATAATATCAGTTTTTCT 12 INTERGENIC homozygous 54976702 7 54996517 54996518 G GCA 15 INTERGENIC heterozygous 54976706 7 54996518 54996520 CA -- 15 INTERGENIC heterozygous 54976708 7 55012374 55012375 A C 27 GENIC homozygous 55564841 7 55004459 55004537 TTTAGTTTCACTTTTTTCTCCATCTTATTAAATTGAGTATCTCTTATTTACATTTCAATTGTTATTCCCTTTCCCCAG ------------------------------------------------------------------------------ 6 GENIC homozygous 54902821 7 55012990 55012992 TT -- 24 GENIC heterozygous 55724524 7 55016151 55016152 T C 29 GENIC possibly homozygous 54395920 7 55016285 55016286 T TTTATTATTATTATTA 5 GENIC homozygous 55724528 7 55016384 55016385 G A 18 GENIC possibly homozygous 55564847 7 55016927 55016928 T C 27 GENIC possibly homozygous 55661498 7 55017183 55017184 T C 29 GENIC possibly homozygous 54395924 7 55017793 55017794 T TTGTG 5 GENIC homozygous 55724531 7 55019329 55019330 A C 30 GENIC homozygous 54395938 7 55019695 55019711 GGGTGTGTGTGTGTGT ---------------- 17 GENIC heterozygous 55724537 7 55019696 55019710 GGTGTGTGTGTGTG -------------- 17 GENIC heterozygous 55724540 7 55021714 55021715 A G 17 GENIC homozygous 54395953 7 55023627 55023628 A - 13 GENIC homozygous 55661501 7 55023640 55023641 G T 19 GENIC homozygous 55661503 7 55024669 55024670 G GCTTGCTA 5 GENIC homozygous 53929092 7 55024671 55024672 G GCAAGCGCTCTACCACTGAGCTAAATCCCC 5 GENIC homozygous 54976712 7 55024991 55024992 C CAT 1 GENIC homozygous 55661505 7 55025025 55025026 C CATATATAT 4 GENIC homozygous 55724546 7 55025028 55025029 G A 6 GENIC homozygous 54395961 7 55025048 55025049 C G 11 GENIC homozygous 54395963 7 55025352 55025353 A G 38 GENIC possibly homozygous 54395965 7 55026834 55026835 C T 30 GENIC homozygous 54395967 7 55027273 55027274 A T 23 GENIC homozygous 54395969 7 55027824 55027825 A T 29 GENIC possibly homozygous 54395971 7 55028132 55028133 C T 29 GENIC homozygous 55661507 7 55029590 55029591 T A 21 GENIC possibly homozygous 54395977 7 55029684 55029685 A ATATC 2 GENIC heterozygous 56205891 7 55029702 55029703 A ATATCTATATCTATATCTATATCATCTAT 2 GENIC heterozygous 56235544 7 55029719 55029720 C CTATATCTA 7 GENIC possibly homozygous 55724555 7 55030223 55030224 G A 25 GENIC possibly homozygous 54395989 7 55030651 55030652 G A 26 GENIC homozygous 54395993 7 55031072 55031073 G GTAGTGAGAGACC 36 GENIC possibly homozygous 54395995 7 55031256 55031257 G A 41 GENIC possibly homozygous 55661509 7 55031277 55031278 T C 35 GENIC homozygous 54395997 7 55032022 55032023 A C 24 GENIC possibly homozygous 55661511 7 55032028 55032029 A T 21 GENIC possibly homozygous 55564859 7 55033406 55033407 G GCACACACACACACACA 5 GENIC homozygous 55622708 7 55033925 55033926 T G 28 GENIC possibly homozygous 54396004 7 55034129 55034130 A G 20 GENIC homozygous 55661513 7 55034214 55034215 C T 21 GENIC homozygous 54396006 7 55035185 55035186 T A 22 GENIC homozygous 55661515 7 55035880 55035881 T C 22 GENIC possibly homozygous 55564863 7 55036249 55036250 C T 22 GENIC possibly homozygous 54396012 7 55036455 55036456 G A 24 GENIC homozygous 54396014 7 55036619 55036620 C T 26 GENIC possibly homozygous 55564865 7 55036626 55036627 G A 27 GENIC possibly homozygous 54396016 7 55036676 55036677 T C 29 GENIC possibly homozygous 54396018 7 55036783 55036784 C T 35 GENIC homozygous 54396020 7 55036873 55036874 A G 34 GENIC possibly homozygous 54396022 7 55037665 55037666 A C 24 GENIC homozygous 54396027 7 55037949 55037950 A C 29 GENIC possibly homozygous 54396031 7 55038208 55038209 T C 21 GENIC homozygous 54396033 7 55038382 55038383 T A 25 GENIC homozygous 54396035 7 55038507 55038508 T C 23 GENIC homozygous 54396037 7 55038626 55038627 G C 23 GENIC possibly homozygous 54396039 7 55038787 55038826 TTTAAGAAAGTAGGATCCAGTTTAGAGGCATCAATTAAT --------------------------------------- 13 GENIC possibly homozygous 55218191 7 55038939 55038940 G C 19 GENIC possibly homozygous 54396045 7 55038950 55038951 C T 18 GENIC possibly homozygous 54396047 7 55039226 55039227 G A 21 GENIC homozygous 55564867 7 55039244 55039245 T C 24 GENIC homozygous 54396049 7 55039297 55039298 C A 24 GENIC homozygous 54396051 7 55039440 55039441 C T 19 GENIC homozygous 54396053 7 55039457 55039458 C CT 23 GENIC possibly homozygous 54396055 7 55040076 55040077 C T 29 GENIC homozygous 55564869 7 55040149 55040150 G A 22 GENIC homozygous 55564871 7 55040480 55040481 T A 20 GENIC possibly homozygous 54396057 7 55040490 55040491 A C 16 GENIC homozygous 54396059 7 55040580 55040581 T C 27 GENIC possibly homozygous 54396063 7 55040611 55040612 T - 26 GENIC possibly homozygous 55129387 7 55040722 55040723 A G 20 GENIC homozygous 55564873 7 55040723 55040724 G A 20 GENIC homozygous 55564875 7 55040873 55040874 G C 25 GENIC possibly homozygous 54396065 7 55040899 55040900 C T 25 GENIC homozygous 55564877 7 55040930 55040931 C A 20 GENIC possibly homozygous 54396067 7 55040932 55040934 TT -- 9 GENIC possibly homozygous 55622710 7 55041411 55041412 C T 15 GENIC homozygous 54396069 7 55041443 55041444 C T 14 GENIC homozygous 54396071 7 55041524 55041525 C A 21 GENIC homozygous 54396075 7 55041564 55041565 G C 23 GENIC possibly homozygous 55564879 7 55041588 55041589 G T 23 GENIC possibly homozygous 54396079 7 55041595 55041596 G A 24 GENIC possibly homozygous 55564881 7 55041736 55041737 G T 24 GENIC possibly homozygous 54396081 7 55041788 55041789 A AT 17 GENIC homozygous 55564883 7 55041878 55041879 C T 20 GENIC homozygous 55564885 7 55041988 55041989 A G 29 GENIC homozygous 54396083 7 55042041 55042042 T C 29 GENIC possibly homozygous 54396085 7 55042267 55042268 T C 25 GENIC possibly homozygous 55564887 7 55042277 55042278 A C 31 GENIC possibly homozygous 55564889 7 55042843 55042844 G GT 28 GENIC homozygous 55564891 7 55043379 55043380 A C 23 GENIC possibly homozygous 55564893 7 55043543 55043544 T A 24 GENIC homozygous 55564895 7 55044455 55044456 T TACACAC 6 GENIC homozygous 54976720 7 55045618 55045619 C T 21 GENIC homozygous 55564897 7 55045647 55045648 G GAT 31 GENIC homozygous 54396103 7 55045874 55045875 C T 26 GENIC homozygous 55564899 7 55047386 55047387 C CGTGTGTGTGTGTGTGTGTGTGT 1 GENIC homozygous 55724558 7 55047870 55047871 C T 36 GENIC homozygous 55564901 7 55048092 55048093 G A 26 GENIC homozygous 55564903 7 55049043 55049044 G GAA 13 GENIC homozygous 55448868 7 55050095 55050096 C T 22 GENIC homozygous 55564905 7 55050140 55050141 A T 25 GENIC possibly homozygous 54396113 7 55051688 55051689 G GA 22 GENIC homozygous 55724561 7 55051960 55051961 C A 19 GENIC homozygous 54396121 7 55052060 55052062 AT -- 17 GENIC homozygous 55564907 7 55053170 55053171 C - 22 GENIC homozygous 54976724 7 55053175 55053176 C CT 23 GENIC homozygous 54976726 7 55053531 55053557 TATATATATATATATATATATATATA -------------------------- 16 GENIC heterozygous 55724564 7 55053533 55053557 TATATATATATATATATATATATA ------------------------ 16 GENIC heterozygous 55724567 7 55053585 55053589 TATG ---- 18 GENIC homozygous 53929100 7 55053679 55053680 G A 23 GENIC possibly homozygous 55661519 7 55053769 55053770 T C 19 GENIC homozygous 54396129 7 55053827 55053828 G A 14 GENIC homozygous 55661521 7 55054406 55054407 G A 20 GENIC homozygous 54396131 7 55054606 55054607 T C 11 GENIC homozygous 54396133 7 55054721 55054733 ACACACACACAC ------------ 2 GENIC heterozygous 55081807 7 55055125 55055126 C A 15 GENIC homozygous 55661523 7 55055156 55055157 T C 15 GENIC homozygous 55661526 7 55055655 55055656 T TA 26 GENIC possibly homozygous 55129389 7 55055847 55055848 C T 23 GENIC possibly homozygous 54396137 7 55056331 55056332 T C 34 GENIC possibly homozygous 55661528 7 55056916 55056917 T - 22 GENIC homozygous 55661530 7 55056922 55056923 T C 21 GENIC homozygous 55661532 7 55056981 55056982 A T 25 GENIC possibly homozygous 55661535 7 55056991 55056992 A - 31 GENIC possibly homozygous 55661537 7 55057052 55057053 A T 32 GENIC homozygous 55661539 7 55057176 55057177 C T 28 GENIC possibly homozygous 55661542 7 55057631 55057632 T A 19 GENIC homozygous 55661544 7 55057962 55057963 A G 15 GENIC homozygous 54396147 7 55058434 55058435 T C 27 GENIC possibly homozygous 54396149 7 55059981 55059982 A AT 5 GENIC homozygous 55724570 7 55061364 55061365 A G 8 GENIC possibly homozygous 55564915 7 55061487 55061491 TATG ---- 13 GENIC heterozygous 55564919 7 55062247 55062248 T - 30 GENIC possibly homozygous 55661547 7 55062424 55062425 T C 29 GENIC possibly homozygous 55661549 7 55062524 55062525 C CT 27 GENIC possibly homozygous 55564923 7 55063604 55063605 T - 16 GENIC possibly homozygous 55564927 7 55063633 55063634 C A 20 GENIC homozygous 55661551 7 55063636 55063637 A T 20 GENIC homozygous 55661553 7 55063642 55063643 T - 20 GENIC homozygous 55311132 7 55063732 55063733 A G 11 GENIC homozygous 55661556 7 55064221 55064222 G GTTT 19 GENIC homozygous 55661558 7 55064247 55064248 T C 22 GENIC homozygous 55564929 7 55064790 55064791 A C 28 GENIC possibly homozygous 55661560 7 55065261 55065262 C T 28 GENIC possibly homozygous 55661562 7 55065605 55065607 AA -- 20 GENIC homozygous 55661564 7 55065885 55065886 A G 20 GENIC possibly homozygous 55564935 7 55066882 55066883 T C 20 GENIC homozygous 55564939 7 55066908 55066909 C T 20 GENIC homozygous 55661567 7 55066964 55066965 A G 23 GENIC homozygous 55661569 7 55067704 55067705 T C 32 GENIC homozygous 55661571 7 55067909 55067910 T C 30 GENIC possibly homozygous 55564943 7 55067936 55067937 C G 34 GENIC possibly homozygous 55661574 7 55067947 55067948 A G 36 GENIC possibly homozygous 55564947 7 55068093 55068094 C A 31 GENIC possibly homozygous 55661576 7 55068305 55068306 C CGCACCCTTTGCTTTCTCTTTCCCAAGATTCAGCCAATTGGAGGAGCAGACAGGGATCAGAACCCACCCCCAGGCATCT 21 GENIC homozygous 55724574 7 55068451 55068452 G C 26 GENIC homozygous 55564951 7 55068470 55068471 A G 24 GENIC possibly homozygous 55564953 7 55068593 55068594 T TA 21 GENIC homozygous 55564955 7 55068595 55068596 A T 21 GENIC homozygous 55564957 7 55068702 55068703 A C 26 GENIC possibly homozygous 55661578 7 55069182 55069183 G A 29 GENIC possibly homozygous 55564959 7 55069302 55069303 G A 25 GENIC possibly homozygous 55564961 7 55069311 55069312 T C 27 GENIC possibly homozygous 55564963 7 55071571 55071572 G A 32 GENIC possibly homozygous 55661580 7 55071721 55071722 A G 26 GENIC possibly homozygous 55564970 7 55072399 55072401 GA -- 8 GENIC heterozygous 55724577 7 55072468 55072469 A C 17 GENIC homozygous 55661582 7 55073352 55073353 G T 32 GENIC homozygous 55661584 7 55073896 55073897 C CCTGT 5 GENIC homozygous 55724580 7 55074030 55074031 C T 32 GENIC homozygous 55661586 7 55074135 55074136 T C 25 GENIC homozygous 55661588 7 55074743 55074744 T C 27 GENIC possibly homozygous 55661590 7 55076420 55076421 C T 20 GENIC homozygous 55661592 7 55076612 55076613 C T 28 GENIC possibly homozygous 55564972 7 55076613 55076614 G C 25 GENIC possibly homozygous 55564974 7 55076705 55076706 G A 31 GENIC possibly homozygous 55661594 7 55077037 55077038 C G 24 GENIC homozygous 55564980 7 55077093 55077094 A G 24 GENIC possibly homozygous 55564982 7 55077187 55077188 T C 22 GENIC homozygous 55661596 7 55077418 55077419 T C 27 GENIC homozygous 55564986 7 55077431 55077432 C T 29 GENIC homozygous 55564988 7 55077524 55077525 A G 23 GENIC possibly homozygous 55564990 7 55077766 55077767 A T 30 GENIC homozygous 55564992 7 55078362 55078363 G A 39 GENIC possibly homozygous 55661598 7 55078367 55078368 A G 38 GENIC possibly homozygous 55564996 7 55078395 55078396 G T 36 GENIC homozygous 55661600 7 55078599 55078600 G A 31 GENIC heterozygous 55661602 7 55078605 55078606 C A 29 GENIC heterozygous 55564998 7 55079313 55079314 T A 36 GENIC possibly homozygous 55661606 7 55078688 55078689 T TCTC 2 GENIC heterozygous 54976733 7 55078735 55078737 TT -- 12 GENIC possibly homozygous 54902823 7 55079125 55079126 G A 20 GENIC possibly homozygous 55661604 7 55039589 55039592 TTT --- 16 GENIC homozygous 55469506 7 55079272 55079273 T - 29 GENIC possibly homozygous 55469508 7 55079356 55079357 G A 40 GENIC possibly homozygous 55565002 7 55079480 55079481 G A 39 GENIC possibly homozygous 54396161 7 55080084 55080085 A G 22 GENIC homozygous 55565004 7 55081274 55081275 T A 39 GENIC possibly homozygous 55565008 7 55082064 55082065 A ATT 20 GENIC homozygous 55565010 7 55082132 55082133 C A 29 GENIC possibly homozygous 54396163 7 55082819 55082820 C T 33 GENIC possibly homozygous 55661608 7 55082855 55082856 T C 30 GENIC possibly homozygous 55565012 7 55082921 55082922 A G 30 GENIC possibly homozygous 55565014 7 55084091 55084092 G A 28 GENIC possibly homozygous 55565018 7 55085405 55085406 G A 27 GENIC possibly homozygous 55565020 7 55085670 55085671 T C 27 GENIC homozygous 55565022 7 55085719 55085720 T A 28 GENIC possibly homozygous 55565024 7 55085931 55085932 C T 31 GENIC possibly homozygous 55565026 7 55086822 55086823 T C 15 GENIC homozygous 55565028 7 55086922 55086923 C CCAAAAAAAAAAAAAA 9 GENIC possibly homozygous 55724583 7 55086941 55086942 C CAAA 12 GENIC possibly homozygous 55724586 7 55086962 55086963 A C 17 GENIC possibly homozygous 55724589 7 55086970 55086971 A C 16 GENIC possibly homozygous 55565029 7 55094180 55094181 T C 19 GENIC homozygous 55565039 7 55087051 55087052 A G 14 GENIC homozygous 55661610 7 55087223 55087224 C G 21 GENIC possibly homozygous 55565031 7 55092302 55092303 C T 25 GENIC possibly homozygous 55565033 7 55093058 55093059 A T 25 GENIC possibly homozygous 55565037 7 55094908 55094909 G A 15 GENIC possibly homozygous 55565041 7 55095717 55095718 T C 13 GENIC homozygous 54396167 7 55095911 55095912 G T 27 GENIC possibly homozygous 54396169 7 55096278 55096279 C A 19 GENIC possibly homozygous 54396171 7 55097899 55097900 A AATATAT 17 GENIC homozygous 54396181 7 55098050 55098051 A G 19 GENIC homozygous 55565045 7 55098121 55098122 A G 27 GENIC possibly homozygous 54396183 7 55098169 55098170 T C 35 GENIC possibly homozygous 55565047 7 55098180 55098181 G A 36 GENIC possibly homozygous 55565049 7 55098566 55098567 G A 24 GENIC homozygous 55565051 7 55099420 55099421 T - 17 GENIC homozygous 54396206 7 55099846 55099847 A C 29 GENIC possibly homozygous 54396208 7 55099887 55099888 A G 29 GENIC possibly homozygous 54396210 7 55106836 55106837 A ATC 27 GENIC homozygous 55565053 7 55107091 55107092 G T 21 GENIC homozygous 54396220 7 55107690 55107691 T C 27 GENIC possibly homozygous 54396224 7 55108194 55108195 T C 25 GENIC homozygous 54396226 7 55108426 55108427 T - 22 GENIC homozygous 54396228 7 55110041 55110042 T C 24 GENIC possibly homozygous 54195897 7 55110107 55110108 T TTCTC 7 GENIC heterozygous 55024596 7 55110149 55110150 C CTCTCT 20 GENIC heterozygous 56156595 7 55112057 55112058 G A 38 GENIC possibly homozygous 55661612 7 55113683 55113684 G GT 18 GENIC homozygous 55724592 7 55113684 55113685 G T 18 GENIC homozygous 54396261 7 55117544 55117545 C A 19 GENIC homozygous 55661614 7 55118187 55118188 A ATT 18 GENIC homozygous 55141685 7 55119478 55119479 T C 23 GENIC possibly homozygous 54396279 7 55119996 55119997 T C 13 GENIC possibly homozygous 54902825 7 55120162 55120163 A AACACACACACAC 10 GENIC homozygous 55218193 7 55121126 55121127 G GAGACAT 17 GENIC homozygous 54396289 7 55122615 55122616 C CT 24 GENIC possibly homozygous 54396293 7 55123389 55123390 C T 28 GENIC homozygous 55661616 7 55124317 55124318 T A 28 GENIC homozygous 54396306 7 55124506 55124507 G A 18 GENIC homozygous 55661618 7 55127760 55127761 C CTG 25 GENIC homozygous 55724595 7 55127766 55127767 C CTCTG 8 GENIC heterozygous 55724598 7 55127768 55127769 C CTG 8 GENIC heterozygous 55766377 7 55127787 55127788 A T 14 GENIC homozygous 55724601 7 55127789 55127790 A T 13 GENIC homozygous 55724605 7 55130704 55130705 A AT 26 GENIC possibly homozygous 55661622 7 55131404 55131405 A C 23 GENIC possibly homozygous 55661624 7 55132250 55132252 AG -- 8 GENIC homozygous 53929114 7 55132258 55132260 AT -- 8 GENIC homozygous 55724608 7 55132451 55132452 A G 32 GENIC possibly homozygous 54396336 7 55132570 55132571 A G 23 GENIC homozygous 54396338 7 55133456 55133457 T TA 27 GENIC possibly homozygous 54396340 7 55135587 55135588 A T 19 GENIC homozygous 55565075 7 55135588 55135589 G A 19 GENIC homozygous 55565077 7 55135667 55135668 T TTG 1 GENIC homozygous 55141687 7 55135819 55135820 T C 16 GENIC homozygous 54396348 7 55136210 55136211 C T 24 GENIC possibly homozygous 54396350 7 55136336 55136337 C T 14 GENIC possibly homozygous 55661626 7 55136458 55136459 A T 21 GENIC possibly homozygous 54396352 7 55136464 55136465 T TAGAG 21 GENIC homozygous 54396354 7 55137451 55137452 A T 26 GENIC homozygous 54396365 7 55138885 55138887 TT -- 22 GENIC homozygous 55661628 7 55139062 55139063 A ACTAT 24 GENIC possibly homozygous 54396367 7 55139214 55139215 G GA 26 GENIC possibly homozygous 55661630 7 55141792 55141793 A - 19 GENIC possibly homozygous 55565095 7 55142244 55142245 T C 24 GENIC possibly homozygous 54396388 7 55144753 55144754 A G 24 GENIC homozygous 54396414 7 55145423 55145457 GGACAGCTCCTCACATCTGTGAGGACAGCTCCTC ---------------------------------- 3 GENIC heterozygous 55724611 7 55150389 55150390 C CTTGTT 22 GENIC possibly homozygous 55661632 7 55150601 55150602 G T 21 GENIC possibly homozygous 54396424 7 55152600 55152601 C - 18 GENIC homozygous 53929123 7 55153234 55153235 A - 19 GENIC homozygous 54396443 7 55157653 55157661 ACACACAC -------- 4 GENIC heterozygous 55724614