chr start stop reference nuc variant nuc depth genic status zygosity variant ID 7 41115181 41115182 A T 17 INTERGENIC homozygous 53889178 7 41115192 41115193 A T 15 INTERGENIC possibly homozygous 53889179 7 41115749 41115750 G A 25 INTERGENIC homozygous 53889180 7 41116185 41116186 T - 3 INTERGENIC homozygous 53889181 7 41118610 41118611 C T 20 INTERGENIC homozygous 53889183 7 41118746 41118747 T G 30 INTERGENIC homozygous 53889184 7 41119028 41119029 T C 2 INTERGENIC homozygous 53889185 7 41119031 41119032 G A 1 INTERGENIC homozygous 53889186 7 41119037 41119041 AGAA ---- 4 INTERGENIC homozygous 53889187 7 41119047 41119048 A C 5 INTERGENIC homozygous 53889188 7 41119125 41119126 G A 26 INTERGENIC possibly homozygous 53889189 7 41119404 41119405 G GC 9 INTERGENIC possibly homozygous 53889190 7 41119406 41119407 T A 10 INTERGENIC possibly homozygous 55309575 7 41119910 41119911 T G 10 INTERGENIC possibly homozygous 53889192 7 41120188 41120189 C CT 15 INTERGENIC possibly homozygous 53889193 7 41120257 41120258 A C 23 INTERGENIC homozygous 53889194 7 41120490 41120491 C T 20 INTERGENIC possibly homozygous 53889195 7 41120557 41120558 A G 24 INTERGENIC possibly homozygous 53889196 7 41120691 41120692 A T 9 INTERGENIC possibly homozygous 53889197 7 41120692 41120693 C T 9 INTERGENIC possibly homozygous 53889198 7 41121073 41121074 A T 14 INTERGENIC homozygous 53889199 7 41121087 41121088 C T 18 INTERGENIC homozygous 53889200 7 41121296 41121297 T A 36 INTERGENIC possibly homozygous 53889201 7 41121619 41121620 A G 22 INTERGENIC possibly homozygous 53889202 7 41121696 41121697 T C 14 INTERGENIC heterozygous 53889203 7 41122162 41122163 G A 25 INTERGENIC homozygous 53889204 7 41122501 41122502 G A 22 INTERGENIC possibly homozygous 53889205 7 41122805 41122806 A G 19 INTERGENIC possibly homozygous 53889206 7 41123046 41123047 A C 14 INTERGENIC homozygous 53889207 7 41123463 41123464 C G 4 INTERGENIC homozygous 53889208 7 41123464 41123465 A AG 4 INTERGENIC homozygous 53889209 7 41123497 41123498 A G 19 INTERGENIC homozygous 53889210 7 41123546 41123547 G A 22 INTERGENIC possibly homozygous 53889211 7 41124075 41124076 A AT 15 INTERGENIC homozygous 53889214 7 41124076 41124077 G A 14 INTERGENIC homozygous 55309577 7 41124252 41124253 G A 27 INTERGENIC homozygous 53889215 7 41124273 41124274 G A 25 INTERGENIC homozygous 53889216 7 41124563 41124564 A G 16 INTERGENIC homozygous 53889217 7 41124977 41124978 A G 21 INTERGENIC homozygous 53889218 7 41125033 41125034 A G 11 INTERGENIC homozygous 53889219 7 41125392 41125393 G A 17 INTERGENIC heterozygous 53889220 7 41125409 41125410 C A 16 INTERGENIC homozygous 53889221 7 41125932 41125933 A AC 10 INTERGENIC possibly homozygous 53889225 7 41126351 41126352 C T 20 INTERGENIC homozygous 53889227 7 41126691 41126692 C CA 1 INTERGENIC homozygous 54365229 7 41126746 41126747 T A 19 INTERGENIC homozygous 53889229 7 41126833 41126834 C T 16 INTERGENIC possibly homozygous 53889230 7 41126906 41126907 C T 14 INTERGENIC possibly homozygous 53889231 7 41127110 41127111 G A 18 INTERGENIC homozygous 53889232 7 41127183 41127184 T TTTGTTGTTG 4 INTERGENIC homozygous 55309580 7 41128162 41128163 C T 19 INTERGENIC possibly homozygous 53889234 7 41128330 41128331 T A 15 INTERGENIC homozygous 53889235 7 41123472 41123473 A T 6 INTERGENIC homozygous 54194343 7 41129726 41129727 G T 9 INTERGENIC possibly homozygous 53889236 7 41132123 41132124 T C 16 INTERGENIC homozygous 53889241 7 41130082 41130083 T A 26 INTERGENIC homozygous 53889237 7 41130513 41130514 T C 17 INTERGENIC possibly homozygous 53889238 7 41131200 41131201 T C 6 INTERGENIC homozygous 53889239 7 41131205 41131206 A G 8 INTERGENIC possibly homozygous 53889240 7 41130881 41130883 AA -- 7 INTERGENIC heterozygous 54565408 7 41132140 41132158 CTGTTATGAGGTAACTAT ------------------ 2 INTERGENIC homozygous 53889242 7 41132926 41132927 C T 33 INTERGENIC homozygous 53889243 7 41133558 41133559 A AT 8 INTERGENIC possibly homozygous 53889244 7 41134142 41134143 A AG 27 INTERGENIC possibly homozygous 53889245 7 41134436 41134437 A G 16 INTERGENIC homozygous 53889246 7 41134479 41134480 A - 15 INTERGENIC possibly homozygous 53889247 7 41134549 41134550 G A 10 INTERGENIC homozygous 53889248 7 41135368 41135369 A G 20 INTERGENIC homozygous 53889249 7 41135719 41135720 A T 11 INTERGENIC possibly homozygous 53889250 7 41135799 41135800 G A 20 INTERGENIC homozygous 53889251 7 41135875 41135876 A G 20 INTERGENIC possibly homozygous 53889252 7 41136263 41136264 G T 19 INTERGENIC possibly homozygous 53889253 7 41136859 41136860 A C 7 INTERGENIC possibly homozygous 53889254 7 41136920 41136921 A G 27 INTERGENIC homozygous 53889255 7 41137346 41137347 T C 18 INTERGENIC homozygous 53889256 7 41137623 41137624 A G 19 INTERGENIC homozygous 53889258 7 41138091 41138092 G A 18 INTERGENIC possibly homozygous 53889260 7 41138113 41138114 G A 17 INTERGENIC homozygous 53889261 7 41138961 41138962 G A 20 INTERGENIC possibly homozygous 53889263 7 41139355 41139356 G GA 3 INTERGENIC heterozygous 53889264 7 41140534 41140535 G - 3 INTERGENIC homozygous 53889265 7 41140537 41140538 G - 3 INTERGENIC homozygous 53889266 7 41141371 41141372 C CA 1 INTERGENIC homozygous 53889268 7 41141544 41141545 G A 22 INTERGENIC possibly homozygous 53889269 7 41141917 41141918 G A 21 INTERGENIC possibly homozygous 53889270 7 41142556 41142560 ATGT ---- 2 INTERGENIC heterozygous 53889271 7 41142677 41142678 C T 4 INTERGENIC homozygous 54194347 7 41142678 41142679 T A 4 INTERGENIC homozygous 53889272 7 41142879 41142880 G A 2 INTERGENIC heterozygous 53889275 7 41142880 41142881 C T 2 INTERGENIC heterozygous 53889276 7 41144157 41144158 C A 25 INTERGENIC homozygous 53889277 7 41144569 41144570 T C 22 INTERGENIC possibly homozygous 53889278 7 41145125 41145126 A G 26 INTERGENIC homozygous 53889279 7 41145796 41145797 A G 6 INTERGENIC homozygous 53889281 7 41146171 41146172 C T 13 INTERGENIC heterozygous 53889287 7 41147403 41147404 C CT 7 INTERGENIC heterozygous 53889290 7 41152461 41152462 A T 20 INTERGENIC possibly homozygous 53889297 7 41155489 41155490 G A 19 GENIC homozygous 53889302 7 41156016 41156017 T C 9 GENIC homozygous 53889303 7 41156417 41156418 C T 2 GENIC homozygous 53889304 7 41156426 41156428 CT -- 6 GENIC homozygous 53889305 7 41156666 41156667 T A 21 GENIC homozygous 53889307 7 41156915 41156916 A T 12 GENIC homozygous 54194349 7 41157869 41157870 A T 19 GENIC homozygous 53889308 7 41158454 41158455 G GTTGTTTTGCT 5 GENIC heterozygous 55309586 7 41159045 41159046 G GT 6 GENIC homozygous 53889312 7 41159294 41159295 G A 18 GENIC homozygous 53889314 7 41159525 41159526 A G 22 GENIC possibly homozygous 53889315 7 41159663 41159664 A G 7 GENIC homozygous 53889316 7 41159667 41159668 T G 4 GENIC homozygous 53889317 7 41159744 41159745 C G 15 GENIC homozygous 53889318 7 41159815 41159816 C A 14 GENIC possibly homozygous 53889320 7 41160260 41160270 GGGAATAATT ---------- 6 GENIC homozygous 53889321 7 41160931 41160932 T TC 4 GENIC heterozygous 53889323 7 41160961 41160962 A G 13 GENIC homozygous 53889324 7 41161350 41161351 A G 19 GENIC possibly homozygous 53889325 7 41161382 41161383 T - 7 GENIC possibly homozygous 53889326 7 41161390 41161391 C G 4 GENIC homozygous 53889327 7 41161412 41161413 C T 6 GENIC homozygous 53889328 7 41161444 41161445 T G 17 GENIC possibly homozygous 53889329 7 41161598 41161599 A G 13 GENIC homozygous 53889330 7 41161616 41161617 A G 15 GENIC homozygous 53889331 7 41161683 41161684 T C 6 GENIC heterozygous 53889332 7 41161856 41161857 A T 25 GENIC possibly homozygous 53889333 7 41162535 41162536 G A 21 GENIC possibly homozygous 53889334 7 41162720 41162721 C T 21 GENIC possibly homozygous 53889335 7 41162990 41162991 T - 2 GENIC homozygous 53889336 7 41164988 41164998 AAAACAAAAC ---------- 4 GENIC heterozygous 53889338 7 41165692 41165693 A G 20 GENIC homozygous 53889339 7 41167414 41167415 G C 15 GENIC heterozygous 53889340 7 41167461 41167462 G A 12 GENIC heterozygous 53889341 7 41167795 41167796 G A 12 GENIC possibly homozygous 53889342 7 41167912 41167913 A C 7 GENIC possibly homozygous 53889343 7 41167970 41167971 A T 17 GENIC possibly homozygous 53889344 7 41168171 41168172 T A 5 GENIC heterozygous 53889345 7 41168176 41168181 TCTAT ----- 2 GENIC homozygous 53889346 7 41168248 41168249 G A 17 GENIC homozygous 53889347 7 41168447 41168448 A T 17 GENIC homozygous 53889348 7 41168711 41168712 T C 26 GENIC possibly homozygous 53889349 7 41168981 41168982 T C 19 GENIC homozygous 53889350 7 41168994 41168995 T TTA 10 GENIC homozygous 53889351 7 41169013 41169014 G A 17 GENIC possibly homozygous 53889352 7 41169061 41169062 A C 16 GENIC homozygous 53889353 7 41169343 41169348 GTTTT ----- 1 GENIC homozygous 53889354 7 41169348 41169349 T A 1 GENIC homozygous 55353002 7 41169470 41169471 G A 6 GENIC homozygous 53889356 7 41169476 41169477 C A 9 GENIC homozygous 53889357 7 41169502 41169503 C G 17 GENIC homozygous 53889358 7 41169727 41169728 C T 9 GENIC possibly homozygous 53889361 7 41169531 41169532 T C 20 GENIC possibly homozygous 53889359 7 41169634 41169635 T C 18 GENIC homozygous 53889360 7 41156916 41156917 T C 11 GENIC homozygous 54895014 7 41170254 41170255 C T 14 GENIC homozygous 53889362 7 41170417 41170418 G A 19 GENIC homozygous 53889363 7 41170732 41170733 A T 15 GENIC possibly homozygous 53889364 7 41171318 41171319 A G 16 GENIC possibly homozygous 53889365 7 41171559 41171560 T C 22 GENIC possibly homozygous 53889366 7 41171683 41171684 T C 9 GENIC homozygous 53889367 7 41171866 41171867 C T 12 GENIC homozygous 53889368 7 41171963 41171964 C T 13 GENIC possibly homozygous 53889369 7 41172383 41172384 A ATT 6 GENIC homozygous 55309589 7 41172408 41172409 C T 18 GENIC possibly homozygous 53889376 7 41173607 41173608 T - 5 GENIC heterozygous 53889377 7 41173728 41173729 G A 19 GENIC homozygous 53889378 7 41173825 41173826 G C 22 GENIC possibly homozygous 53889379 7 41174360 41174361 T TA 2 GENIC heterozygous 53889380 7 41174720 41174721 T C 20 GENIC homozygous 53889381 7 41175500 41175501 G A 10 GENIC possibly homozygous 54194350 7 41177956 41177957 C A 18 GENIC homozygous 53889386 7 41176114 41176115 A - 10 GENIC possibly homozygous 53889382 7 41176769 41176770 C T 23 GENIC homozygous 53889383 7 41176807 41176812 GTTTT ----- 6 GENIC homozygous 53889384 7 41177610 41177611 G A 19 GENIC possibly homozygous 53889385 7 41177658 41177659 A - 1 GENIC homozygous 55173857 7 41175499 41175500 A T 10 GENIC possibly homozygous 54649206 7 41178060 41178061 C A 15 GENIC possibly homozygous 53889387 7 41178916 41178917 T - 5 GENIC homozygous 53889389 7 41179319 41179320 G A 22 GENIC possibly homozygous 53889390 7 41179526 41179527 G T 20 GENIC homozygous 53889391 7 41179534 41179535 G GA 20 GENIC homozygous 53889392 7 41179576 41179577 G A 22 GENIC possibly homozygous 53889393 7 41179914 41179915 T G 4 GENIC heterozygous 53889394 7 41180171 41180173 AC -- 7 GENIC homozygous 53889395 7 41180579 41180580 A G 20 GENIC possibly homozygous 53889396 7 41181176 41181177 T C 23 GENIC homozygous 53889397 7 41181275 41181276 G A 14 GENIC possibly homozygous 53889398 7 41182266 41182267 A - 3 GENIC heterozygous 53889399 7 41182844 41182848 TGAA ---- 6 GENIC homozygous 53889401 7 41183531 41183532 T C 18 GENIC possibly homozygous 53889402 7 41183709 41183710 C T 25 GENIC homozygous 53889403 7 41184165 41184166 C T 25 GENIC homozygous 53889404 7 41184888 41184889 A G 10 GENIC homozygous 53889409 7 41185097 41185098 C CTTTTTT 2 GENIC heterozygous 54365511 7 41185143 41185144 G A 16 GENIC possibly homozygous 53889411 7 41185778 41185779 T - 19 GENIC homozygous 53889417 7 41185805 41185806 A G 14 GENIC possibly homozygous 53889418 7 41186659 41186660 G T 11 GENIC homozygous 53889426 7 41186670 41186671 A G 7 GENIC homozygous 53889427 7 41187035 41187037 AA -- 4 GENIC heterozygous 53889428 7 41187161 41187162 G T 5 GENIC homozygous 53889429 7 41188116 41188117 A G 13 GENIC homozygous 53889430 7 41188131 41188132 G GT 10 GENIC homozygous 53889431 7 41188372 41188373 G A 20 GENIC homozygous 53889432 7 41189861 41189862 T C 11 GENIC heterozygous 53889436 7 41190203 41190204 T C 19 GENIC homozygous 53889437 7 41191579 41191580 G A 17 GENIC possibly homozygous 53889440 7 41192484 41192485 A G 17 GENIC possibly homozygous 53889441 7 41193377 41193378 T C 17 GENIC homozygous 53889442 7 41193392 41193393 A - 13 GENIC homozygous 54565416 7 41194564 41194565 G A 26 GENIC heterozygous 53889443 7 41195056 41195057 G - 13 GENIC possibly homozygous 53889444 7 41195076 41195077 A G 12 GENIC homozygous 53889445 7 41195776 41195777 T TTTTGG 2 GENIC homozygous 53889446 7 41195846 41195847 A G 18 GENIC possibly homozygous 53889447 7 41196053 41196054 A G 18 GENIC homozygous 53889448 7 41196868 41196869 G A 14 GENIC homozygous 53889449 7 41197261 41197262 C T 7 GENIC heterozygous 53889450 7 41197354 41197355 C CG 4 GENIC heterozygous 54365528 7 41197355 41197356 G - 4 GENIC heterozygous 53889451 7 41198378 41198379 G - 16 GENIC homozygous 53889452 7 41200340 41200341 C T 18 GENIC possibly homozygous 53889453 7 41200589 41200590 G A 23 GENIC possibly homozygous 53889454 7 41202385 41202386 C T 19 GENIC possibly homozygous 53889455 7 41204729 41204730 G A 23 GENIC possibly homozygous 53889458 7 41204960 41204961 G A 14 GENIC homozygous 53889459 7 41205663 41205664 A C 25 GENIC possibly homozygous 53889460 7 41206219 41206227 ACACACAC -------- 1 GENIC homozygous 54971154 7 41207219 41207220 C T 15 GENIC homozygous 53889461 7 41208010 41208011 C - 21 GENIC homozygous 53889462 7 41208820 41208821 T C 17 GENIC homozygous 53889463 7 41209415 41209416 A T 18 GENIC homozygous 53889465 7 41210143 41210144 G A 15 GENIC homozygous 53889466 7 41210366 41210367 C - 5 GENIC homozygous 53889467 7 41210740 41210741 A C 12 GENIC possibly homozygous 55309592 7 41211732 41211733 G A 13 GENIC possibly homozygous 53889468 7 41212974 41212975 A AC 21 GENIC possibly homozygous 53889469 7 41214578 41214579 T C 19 GENIC homozygous 53889470 7 41214603 41214604 C G 25 GENIC heterozygous 53889471 7 41216490 41216491 T C 12 GENIC homozygous 53889477 7 41216675 41216676 T A 10 GENIC homozygous 53889478 7 41217155 41217156 A - 7 GENIC heterozygous 54365580 7 41218228 41218229 C T 35 GENIC possibly homozygous 53889479 7 41218681 41218693 CTCTTGGCGTTC ------------ 1 GENIC homozygous 53889480 7 41222555 41222556 T G 13 GENIC possibly homozygous 53889484