chr start stop reference nuc variant nuc depth genic status zygosity variant ID 7 142580833 142580834 G GA 11 INTERGENIC homozygous 54161366 7 142582071 142582073 GT -- 4 INTERGENIC heterozygous 55017659 7 142583691 142583692 A G 8 INTERGENIC homozygous 54161367 7 142586083 142586084 A G 16 INTERGENIC homozygous 54161368 7 142587797 142587798 G A 34 INTERGENIC homozygous 54161369 7 142591619 142591621 GG -- 1 INTERGENIC homozygous 54161371 7 142593093 142593094 T TAC 19 INTERGENIC homozygous 54161372 7 142593658 142593659 T A 15 INTERGENIC homozygous 54161373 7 142593803 142593804 G GAACA 16 INTERGENIC homozygous 54161374 7 142594519 142594520 G C 21 INTERGENIC homozygous 54161375 7 142596936 142596938 TT -- 26 INTERGENIC homozygous 54161377 7 142597283 142597284 A G 20 INTERGENIC homozygous 54161378 7 142597797 142597798 T - 21 INTERGENIC homozygous 54161379 7 142598712 142598713 A G 21 INTERGENIC homozygous 54161382 7 142600466 142600467 T TA 13 INTERGENIC heterozygous 54161383 7 142600467 142600468 A - 13 INTERGENIC heterozygous 54161384 7 142603049 142603050 A - 11 INTERGENIC possibly homozygous 54161387 7 142606445 142606446 G A 16 GENIC homozygous 54161393 7 142610326 142610327 T C 21 GENIC homozygous 54161394 7 142615146 142615147 A - 31 GENIC homozygous 54161395 7 142615950 142615951 T C 20 GENIC homozygous 54161396 7 142615955 142615956 A C 22 GENIC homozygous 54161397 7 142616079 142616081 TT -- 7 GENIC homozygous 54161398 7 142617656 142617657 A C 14 GENIC homozygous 54161399 7 142618218 142618219 G A 20 GENIC homozygous 54161400 7 142619547 142619549 TA -- 26 GENIC homozygous 54161401 7 142622832 142622833 G GAAAAAAA 5 GENIC heterozygous 55017663 7 142622832 142622833 G GAAAAAAAAA 5 GENIC heterozygous 55017665 7 142626376 142626377 A AATAT 5 GENIC heterozygous 54161404 7 142626376 142626377 A AAT 5 GENIC heterozygous 54268779 7 142626449 142626451 CA -- 4 GENIC homozygous 54161406 7 142628459 142628460 A AAAG 14 GENIC homozygous 54161407 7 142628492 142628493 C CT 9 GENIC possibly homozygous 54161408 7 142628675 142628715 AGCCCACTGAGGTGAAATCGTATGGGAAGTTTTCTCTGAG ---------------------------------------- 8 GENIC homozygous 55100790 7 142591215 142591216 A AACACACACACAC 2 INTERGENIC homozygous 54924731 7 142626412 142626416 ACAC ---- 5 GENIC heterozygous 55100786 7 142626447 142626448 C T 6 GENIC heterozygous 55100788 7 142631289 142631290 C - 3 GENIC homozygous 54161412 7 142631462 142631464 AA -- 12 GENIC heterozygous 55060366 7 142631463 142631464 A - 12 GENIC heterozygous 55017667 7 142631607 142631609 TT -- 17 GENIC homozygous 54268782 7 142632499 142632500 C T 24 GENIC homozygous 54161415 7 142635714 142635715 A AT 15 GENIC possibly homozygous 54161416 7 142636782 142636783 G C 13 GENIC homozygous 54161417 7 142639125 142639126 A - 8 GENIC homozygous 54161418 7 142639229 142639230 T TAAATAAATAAATAAATAAGC 6 GENIC homozygous 55100792 7 142639407 142639409 AA -- 3 GENIC homozygous 54161419 7 142640520 142640521 A T 12 GENIC homozygous 54161422 7 142640521 142640522 G A 12 GENIC homozygous 55100794 7 142642830 142642831 C CTT 12 GENIC homozygous 54161423 7 142643633 142643634 G GAGAGAGAGAGAGAGAGA 12 GENIC heterozygous 55100798 7 142645121 142645132 TTTTTTTTTTT ----------- 10 GENIC homozygous 54161425 7 142645242 142645243 A G 21 GENIC homozygous 54161426 7 142646515 142646516 T C 27 GENIC homozygous 54161427 7 142646566 142646568 AT -- 22 GENIC homozygous 54161428 7 142647504 142647505 A G 9 GENIC homozygous 54161429 7 142648329 142648330 T C 16 GENIC homozygous 54161430 7 142650847 142650848 A G 19 GENIC homozygous 54161431 7 142651314 142651319 TTTTT ----- 29 GENIC heterozygous 55017671 7 142651315 142651319 TTTT ---- 29 GENIC heterozygous 55100800 7 142651318 142651319 T - 29 GENIC heterozygous 55017673 7 142651697 142651698 A AAAAAAATAAAAATAAAAAAAAAAAGAATTC 31 GENIC heterozygous 55180755 7 142653251 142653252 A G 21 INTERGENIC homozygous 54161434 7 142655832 142655833 A G 17 GENIC homozygous 54161435 7 142655934 142655935 T TA 11 GENIC homozygous 54161437 7 142656379 142656380 C T 26 GENIC homozygous 54161438 7 142658948 142658949 A G 18 GENIC homozygous 54161439 7 142659581 142659582 G GAGA 13 GENIC heterozygous 55017675 7 142660720 142660721 A G 20 GENIC homozygous 54161440 7 142661966 142661967 G GTTGA 14 INTERGENIC homozygous 54161441 7 142662857 142662858 T TCACACA 2 INTERGENIC heterozygous 55100802 7 142663970 142663971 G A 16 INTERGENIC homozygous 54161442 7 142665395 142665396 G GAACAAAACAAAACAAAACAA 7 INTERGENIC homozygous 55100804 7 142665623 142665625 AC -- 21 INTERGENIC homozygous 54161444 7 142667341 142667342 T A 19 INTERGENIC homozygous 54161445 7 142667417 142667433 GTGTGTGTGTGTGTGT ---------------- 12 INTERGENIC homozygous 54161446 7 142667701 142667702 T C 11 GENIC homozygous 54161447 7 142667715 142667716 A G 12 GENIC homozygous 54161448 7 142668123 142668124 T A 11 GENIC homozygous 54161449 7 142668484 142668485 A G 6 INTERGENIC homozygous 54161450 7 142668804 142668808 ATAT ---- 1 INTERGENIC homozygous 55100806 7 142670230 142670231 C - 16 INTERGENIC homozygous 54161452 7 142670601 142670605 GTGT ---- 4 INTERGENIC heterozygous 55100808 7 142670642 142670643 T C 9 INTERGENIC homozygous 54161456 7 142670651 142670652 A G 9 INTERGENIC homozygous 54161457 7 142670839 142670840 T - 1 INTERGENIC homozygous 55180758 7 142670863 142670864 G T 8 INTERGENIC homozygous 54161459 7 142671843 142671844 A ACTCTTTTTTTTTTTTTCTTCTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTG 3 INTERGENIC homozygous 55017681 7 142672298 142672299 A C 9 INTERGENIC homozygous 54161461 7 142672665 142672677 TGTGTGTGTGTG ------------ 2 INTERGENIC heterozygous 55100814 7 142672667 142672677 TGTGTGTGTG ---------- 2 INTERGENIC heterozygous 55017683 7 142673214 142673215 T C 17 INTERGENIC homozygous 54161462 7 142674365 142674366 G GACACACACAC 10 INTERGENIC homozygous 54161464 7 142674672 142674673 T TTCTC 11 INTERGENIC heterozygous 55100818 7 142674977 142674979 TT -- 6 INTERGENIC homozygous 54161465 7 142675360 142675361 T C 6 INTERGENIC homozygous 54161466 7 142675370 142675379 CATCATCAC --------- 5 INTERGENIC homozygous 55100820 7 142675417 142675418 T C 28 INTERGENIC homozygous 54161468 7 142679630 142679736 ATCCTCCTCCTCGTCGTTCGCGAGCCCCCTGCCGGAGGTGATGAGAGTTGGGACTAAGATCTTTTTTTTTTCAGAAAACGACCGCCAAACCGCCCGCTAGTTGTTT ---------------------------------------------------------------------------------------------------------- 2 INTERGENIC homozygous 55100824 7 142677703 142677704 T TTG 11 INTERGENIC homozygous 55017697 7 142677709 142677710 G GCT 9 INTERGENIC homozygous 55017699 7 142677711 142677712 G GGCAAGCGCTCTACCA 9 INTERGENIC homozygous 55017701 7 142677715 142677716 G A 10 INTERGENIC homozygous 55017703 7 142677717 142677718 T C 9 INTERGENIC homozygous 55017705 7 142679476 142679477 A T 11 INTERGENIC homozygous 54161470 7 142658608 142658609 A - 19 GENIC homozygous 54758875 7 142680941 142680942 C T 6 GENIC homozygous 54161479 7 142681633 142681634 G - 1 GENIC homozygous 55505630 7 142681912 142681913 G GAAAAAAAAAAAAA 10 GENIC homozygous 55100826 7 142681945 142681946 T TC 12 GENIC homozygous 54161482 7 142681955 142681956 G A 13 GENIC homozygous 54161483 7 142682072 142682073 C T 11 GENIC homozygous 54161484 7 142682250 142682251 T A 25 GENIC homozygous 54161485 7 142682268 142682269 T - 28 GENIC homozygous 54161486 7 142682427 142682428 G A 14 GENIC homozygous 54161487 7 142682438 142682439 A G 14 GENIC homozygous 54161488 7 142682703 142682704 T C 29 GENIC homozygous 54161489 7 142683584 142683585 G A 16 GENIC homozygous 54161490