chr start stop reference nuc variant nuc depth genic status zygosity variant ID 6 103376597 103376598 T C 15 INTERGENIC homozygous 54606876 6 103377208 103377209 T C 17 INTERGENIC homozygous 54606878 6 103377690 103377691 G C 26 INTERGENIC possibly homozygous 54606879 6 103378194 103378195 A ATT 1 INTERGENIC homozygous 54939884 6 103376838 103376839 G A 14 INTERGENIC homozygous 54939881 6 103377095 103377096 C T 23 INTERGENIC possibly homozygous 54939882 6 103377976 103377977 T C 21 INTERGENIC homozygous 54939883 6 103378280 103378281 T C 19 INTERGENIC possibly homozygous 54606882 6 103378490 103378491 A - 4 INTERGENIC homozygous 54606884 6 103378976 103378977 A AC 15 INTERGENIC homozygous 54939887 6 103379129 103379130 T TCCTA 6 INTERGENIC homozygous 54939888 6 103379168 103379169 G A 16 INTERGENIC homozygous 54939889 6 103379298 103379300 AA -- 20 INTERGENIC homozygous 54939890 6 103379394 103379395 C T 18 INTERGENIC homozygous 54939891 6 103379645 103379646 A G 7 INTERGENIC heterozygous 54939895 6 103379886 103379887 A G 11 INTERGENIC homozygous 54939896 6 103379934 103379935 G A 7 INTERGENIC homozygous 54939897 6 103379953 103379954 G A 6 INTERGENIC homozygous 54939898 6 103379971 103379972 G T 10 INTERGENIC possibly homozygous 54939899 6 103380479 103380480 T C 19 INTERGENIC possibly homozygous 54606889 6 103380540 103380541 T A 17 INTERGENIC homozygous 54939900 6 103380710 103380711 C - 12 INTERGENIC homozygous 54606890 6 103380959 103380960 G A 13 INTERGENIC possibly homozygous 54606891 6 103380987 103380988 C T 14 INTERGENIC possibly homozygous 54606892 6 103381039 103381040 C T 17 INTERGENIC homozygous 54606893 6 103381119 103381120 T C 19 INTERGENIC homozygous 54606894 6 103381887 103381888 A G 8 INTERGENIC homozygous 54939901 6 103381975 103381976 G T 14 INTERGENIC homozygous 54939902 6 103382296 103382304 CCCTCCCG -------- 3 INTERGENIC heterozygous 54939904 6 103382314 103382315 C A 3 INTERGENIC heterozygous 54939906 6 103382450 103382451 C A 5 INTERGENIC heterozygous 54939908 6 103382485 103382486 C A 10 INTERGENIC homozygous 54939909 6 103382721 103382722 A G 17 INTERGENIC homozygous 54606902 6 103382796 103382797 A C 18 INTERGENIC homozygous 54606903 6 103383002 103383003 A T 9 INTERGENIC homozygous 54606904 6 103383067 103383068 C - 6 INTERGENIC homozygous 54606905 6 103383069 103383070 T A 10 INTERGENIC homozygous 54606906 6 103383428 103383429 A G 7 INTERGENIC homozygous 54606907 6 103383497 103383498 T C 14 INTERGENIC heterozygous 54606908 6 103383772 103383773 G A 12 INTERGENIC homozygous 54606909 6 103383920 103383921 C T 20 INTERGENIC homozygous 54606910 6 103384327 103384328 A G 13 INTERGENIC possibly homozygous 54606912 6 103384572 103384573 T A 4 INTERGENIC homozygous 54606913 6 103384939 103384941 TT -- 2 INTERGENIC homozygous 54939910 6 103385079 103385080 G A 13 INTERGENIC possibly homozygous 54939911 6 103385551 103385552 A G 11 INTERGENIC homozygous 54606916 6 103385637 103385638 A G 18 INTERGENIC homozygous 54606917 6 103385956 103385957 C T 26 INTERGENIC homozygous 54939912 6 103386111 103386112 C T 4 INTERGENIC homozygous 54606918 6 103386115 103386116 T C 4 INTERGENIC homozygous 54606919 6 103386250 103386251 C A 13 INTERGENIC possibly homozygous 54939913 6 103386720 103386721 G A 11 INTERGENIC possibly homozygous 54606920 6 103386820 103386821 A G 2 INTERGENIC heterozygous 54606922 6 103386960 103386961 A G 2 INTERGENIC homozygous 54606923 6 103386991 103386992 C T 4 INTERGENIC homozygous 54939914 6 103387023 103387024 T C 2 INTERGENIC heterozygous 54606924 6 103387086 103387087 G A 1 INTERGENIC homozygous 54606927 6 103387171 103387172 T C 2 INTERGENIC heterozygous 54606928 6 103387701 103387702 T A 6 INTERGENIC homozygous 54606932 6 103387722 103387723 G T 5 INTERGENIC heterozygous 54606933 6 103388068 103388069 A - 1 INTERGENIC homozygous 54606937 6 103390764 103390765 T C 14 INTERGENIC possibly homozygous 54606977 6 103391101 103391102 T A 13 INTERGENIC homozygous 54606978 6 103391105 103391106 A G 11 INTERGENIC homozygous 54606979 6 103391112 103391113 G A 12 INTERGENIC homozygous 54606980 6 103391219 103391220 G A 4 INTERGENIC heterozygous 54606981 6 103391272 103391273 T C 9 INTERGENIC homozygous 54606982 6 103391346 103391347 T G 11 INTERGENIC homozygous 54606983 6 103391506 103391507 G A 4 INTERGENIC heterozygous 54606984 6 103391710 103391711 T A 15 INTERGENIC homozygous 54606986 6 103391852 103391853 G A 15 INTERGENIC homozygous 54606988 6 103392332 103392333 A G 28 INTERGENIC possibly homozygous 54606990 6 103392760 103392761 G A 13 INTERGENIC possibly homozygous 54606991 6 103393001 103393002 G A 23 INTERGENIC possibly homozygous 54606993 6 103393062 103393063 A G 15 INTERGENIC possibly homozygous 54606994 6 103393080 103393081 G GGCC 8 INTERGENIC homozygous 54606995 6 103393358 103393359 A G 5 INTERGENIC heterozygous 54606997 6 103393398 103393399 A T 8 INTERGENIC heterozygous 54606998 6 103393471 103393472 T C 5 INTERGENIC homozygous 54606999 6 103393530 103393531 T C 20 INTERGENIC homozygous 54607000 6 103393601 103393602 A T 8 INTERGENIC homozygous 54607002 6 103393771 103393772 G A 20 INTERGENIC possibly homozygous 54607003 6 103393842 103393843 G A 6 INTERGENIC heterozygous 54607004 6 103393938 103393939 C CGAAA 5 INTERGENIC homozygous 54607005 6 103394116 103394117 T C 10 INTERGENIC homozygous 54607006 6 103394498 103394499 C - 15 INTERGENIC possibly homozygous 54607008 6 103394880 103394881 A T 12 INTERGENIC possibly homozygous 54607012 6 103395106 103395107 G A 4 INTERGENIC homozygous 54607015 6 103394912 103394913 T G 18 INTERGENIC homozygous 54607013 6 103395095 103395096 C T 3 INTERGENIC heterozygous 54607014 6 103395797 103395798 A T 14 INTERGENIC possibly homozygous 54607016 6 103395841 103395842 C A 17 INTERGENIC homozygous 54607017 6 103395951 103395952 A G 23 INTERGENIC possibly homozygous 54607018 6 103396765 103396766 G T 14 INTERGENIC possibly homozygous 54607021 6 103397059 103397060 C T 4 INTERGENIC homozygous 54607023 6 103397064 103397065 A C 3 INTERGENIC homozygous 54607024 6 103397067 103397068 A G 5 INTERGENIC homozygous 54607025 6 103397481 103397482 G A 8 INTERGENIC possibly homozygous 54607027 6 103397498 103397499 A C 7 INTERGENIC homozygous 54607028 6 103397560 103397563 GGC --- 2 INTERGENIC homozygous 54939921 6 103397596 103397597 A G 8 INTERGENIC homozygous 54939922 6 103398501 103398502 A G 20 INTERGENIC homozygous 54607034 6 103398810 103398811 A C 12 INTERGENIC homozygous 54607036 6 103398917 103398918 T G 28 INTERGENIC possibly homozygous 54939926 6 103398938 103398939 A G 19 INTERGENIC homozygous 54939927 6 103399067 103399069 TG -- 11 INTERGENIC possibly homozygous 54939928 6 103399106 103399107 C A 15 INTERGENIC possibly homozygous 54939929 6 103399211 103399212 T TAAAAA 1 INTERGENIC homozygous 54939930 6 103399267 103399268 G A 18 INTERGENIC homozygous 54607037 6 103399288 103399289 T C 9 INTERGENIC homozygous 54939931 6 103399810 103399811 C A 14 INTERGENIC homozygous 54939932 6 103399914 103399915 G A 8 INTERGENIC possibly homozygous 54939933 6 103399915 103399916 G C 8 INTERGENIC possibly homozygous 54939934 6 103404999 103405000 C - 11 INTERGENIC homozygous 54939936 6 103405143 103405144 A T 15 INTERGENIC homozygous 54939937 6 103405417 103405418 G A 13 INTERGENIC heterozygous 54939938 6 103405479 103405481 TA -- 3 INTERGENIC heterozygous 54939940 6 103405582 103405583 A ATGTGTGTGTG 1 INTERGENIC homozygous 54939943 6 103405956 103405957 G C 31 INTERGENIC possibly homozygous 54939944 6 103406122 103406123 C CTT 15 INTERGENIC homozygous 54939945 6 103406884 103406885 A AT 11 INTERGENIC homozygous 54939946 6 103406996 103406997 T C 27 INTERGENIC possibly homozygous 54939947 6 103407223 103407224 C T 20 INTERGENIC homozygous 54939948 6 103407279 103407280 G A 20 INTERGENIC homozygous 54939949 6 103407538 103407539 C - 5 INTERGENIC homozygous 54607043 6 103407853 103407854 A T 12 INTERGENIC heterozygous 54939950 6 103407895 103407896 T G 13 INTERGENIC possibly homozygous 54607044 6 103408246 103408254 GACAGAAA -------- 1 INTERGENIC homozygous 54939951 6 103409079 103409080 C T 2 INTERGENIC homozygous 54939953 6 103410377 103410378 G C 15 INTERGENIC homozygous 54607059 6 103410475 103410476 T C 18 INTERGENIC possibly homozygous 54607060 6 103410600 103410601 C T 16 INTERGENIC homozygous 54939957 6 103411119 103411120 A T 20 INTERGENIC possibly homozygous 54607062 6 103411419 103411420 A G 19 INTERGENIC homozygous 54607063 6 103411636 103411637 G C 18 INTERGENIC homozygous 54607064 6 103412057 103412058 C G 22 INTERGENIC possibly homozygous 54607065 6 103414195 103414196 C T 11 INTERGENIC homozygous 54939959 6 103414335 103414336 C - 9 INTERGENIC homozygous 54607070 6 103414736 103414737 A G 18 INTERGENIC heterozygous 54607071 6 103414737 103414738 A G 18 INTERGENIC heterozygous 54607072 6 103414777 103414778 T A 16 INTERGENIC homozygous 54607073 6 103414804 103414805 G C 16 INTERGENIC possibly homozygous 54607074 6 103415284 103415285 T C 20 INTERGENIC homozygous 54607075 6 103415554 103415555 T C 15 INTERGENIC possibly homozygous 54607077 6 103420285 103420286 C T 7 INTERGENIC homozygous 54607084 6 103415835 103415836 T C 11 INTERGENIC homozygous 54607078 6 103418071 103418072 C CCCA 5 INTERGENIC homozygous 54939960 6 103419381 103419382 T C 6 INTERGENIC homozygous 54607080 6 103423680 103423681 G A 27 INTERGENIC possibly homozygous 54939961 6 103424221 103424222 T C 5 INTERGENIC homozygous 54607086 6 103424985 103424986 A G 12 INTERGENIC possibly homozygous 54607094 6 103426508 103426509 T G 8 INTERGENIC homozygous 54607095 6 103427117 103427118 A C 7 INTERGENIC homozygous 54607096 6 103428483 103428484 C T 20 INTERGENIC homozygous 54939964 6 103428510 103428511 A G 26 INTERGENIC homozygous 54607099 6 103428618 103428619 A G 24 INTERGENIC possibly homozygous 54607100 6 103428784 103428785 A T 10 INTERGENIC possibly homozygous 54939965 6 103430701 103430702 T C 20 INTERGENIC possibly homozygous 54939967 6 103430971 103430972 A C 16 INTERGENIC possibly homozygous 54607105 6 103431722 103431723 A G 16 INTERGENIC homozygous 54607108 6 103432969 103432970 G C 10 INTERGENIC heterozygous 54607109 6 103433601 103433602 C T 7 INTERGENIC possibly homozygous 54607110 6 103433868 103433869 A T 11 INTERGENIC homozygous 54607111 6 103434023 103434024 A T 16 INTERGENIC possibly homozygous 54607112 6 103435435 103435436 A G 11 INTERGENIC possibly homozygous 54607118 6 103437782 103437783 C T 19 INTERGENIC possibly homozygous 54939972 6 103436347 103436348 C A 3 INTERGENIC homozygous 54607121 6 103437398 103437399 C CTT 1 INTERGENIC homozygous 54607124 6 103437645 103437646 T C 4 INTERGENIC heterozygous 54607125 6 103437993 103437994 A G 18 INTERGENIC homozygous 54607126 6 103438577 103438578 G A 14 INTERGENIC homozygous 54607127 6 103439267 103439268 C G 18 INTERGENIC homozygous 54939973 6 103440262 103440263 G A 27 INTERGENIC homozygous 54939974 6 103440300 103440301 C A 26 INTERGENIC homozygous 54607131 6 103440762 103440763 G A 9 INTERGENIC homozygous 54939975 6 103440996 103440997 T G 15 INTERGENIC possibly homozygous 54607134 6 103441242 103441243 T C 9 INTERGENIC homozygous 54607135 6 103441427 103441428 G C 18 INTERGENIC heterozygous 54607136 6 103441691 103441692 G A 20 INTERGENIC homozygous 54607139 6 103442142 103442143 C T 16 INTERGENIC homozygous 54607141 6 103442171 103442172 C CA 12 INTERGENIC possibly homozygous 54607142 6 103442252 103442253 C T 13 INTERGENIC homozygous 54607143 6 103442269 103442270 C T 10 INTERGENIC homozygous 54607144 6 103443735 103443736 G A 21 INTERGENIC possibly homozygous 54607146 6 103444550 103444551 C T 10 INTERGENIC homozygous 54939976 6 103445773 103445774 A G 19 INTERGENIC homozygous 54607148 6 103446013 103446014 C T 15 INTERGENIC homozygous 54939978 6 103452025 103452026 A ATGAT 6 INTERGENIC homozygous 54607173 6 103452868 103452869 C A 20 INTERGENIC homozygous 54607174 6 103454335 103454336 G A 16 INTERGENIC possibly homozygous 54939986 6 103456161 103456162 G A 27 INTERGENIC homozygous 54939987 6 103457134 103457135 G A 14 INTERGENIC possibly homozygous 54939988 6 103457528 103457529 C - 6 INTERGENIC heterozygous 54607179 6 103457967 103457968 T C 24 INTERGENIC homozygous 54607180 6 103459099 103459100 T C 7 INTERGENIC homozygous 54607183 6 103460260 103460261 C G 19 INTERGENIC homozygous 54607187 6 103460355 103460356 C T 25 INTERGENIC homozygous 54939990 6 103460378 103460379 G A 16 INTERGENIC possibly homozygous 54607188 6 103460379 103460380 A T 15 INTERGENIC possibly homozygous 54607189 6 103470140 103470141 C T 11 INTERGENIC homozygous 54607197