chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 138159951 138159952 A - 9 GENIC homozygous 56457045 5 138178561 138178562 C T 23 INTERGENIC possibly homozygous 56682881 5 138178836 138178837 G C 22 INTERGENIC homozygous 57282685