chrstartstopreference nucvariant nucdepthgenic statuszygosityvariant ID
5143500737143500739TA--15GENIChomozygous55759559
5143501519143501520TTG24GENIChomozygous55759563
5143502110143502111TG30GENIChomozygous55759564
5143502112143502113TG30GENIChomozygous55759565
5143502113143502114AACC30GENIChomozygous55759566
5143502116143502119TCT---30GENIChomozygous55759567
5143502123143502124G-28GENIChomozygous55759568
5143502408143502409TC24GENIChomozygous55759569
5143502984143502985CT27GENIChomozygous55759570
5143503234143503242AGTAAAAT--------19GENIChomozygous55759571
5143504240143504242CA--10GENIChomozygous56458389
5143504247143504261TCTCTCTCTCTCTT--------------10GENIChomozygous56458390
5143504944143504945TTAA9GENIChomozygous55759573
5143505370143505371AG22GENIChomozygous55759574
5143505501143505502GGAAA15GENICpossibly homozygous55759575
5143506093143506094GA20GENIChomozygous55759576
5143506851143506852TC23GENICpossibly homozygous55759577
5143507181143507182AC18GENIChomozygous55759578
5143507581143507592AAACAAAAAAC-----------7GENIChomozygous55759582
5143507785143507786TA19GENIChomozygous55759583
5143508481143508483AC--6GENIChomozygous56458391
5143508498143508553CTCTCTCTCTCTCCTAACCAAAGCCCAGAGTTGATCTAAAACACACACTCACACA-------------------------------------------------------4GENICheterozygous56494401
5143508581143508582CCG3GENICheterozygous56458392
5143508606143508607GA12GENICheterozygous55912603
5143510084143510094TTTTTCTTTC----------8GENICheterozygous56458393
5143510156143510157AG20GENIChomozygous55759588
5143512197143512198CT27GENIChomozygous55759589
5143512403143512404TC16GENIChomozygous55759590
5143513168143513169AAGTGT7GENIChomozygous55759592
5143513301143513302TC28GENIChomozygous55759593
5143513759143513760A-24GENICpossibly homozygous55759594
5143514376143514377AC21GENIChomozygous55759595
5143514977143514978TC34GENIChomozygous55759596
5143515924143515925GA18GENIChomozygous55759597
5143516618143516619AAGGCCACT16GENICpossibly homozygous55759598
5143518310143518311TC16GENIChomozygous55759599
5143520072143520073CG29GENIChomozygous55759600
5143522245143522247TG--22GENIChomozygous55759603
5143522850143522851TC31GENICpossibly homozygous55759605
5143523066143523067CT43GENIChomozygous55759606
5143526655143526656AG25GENIChomozygous55759607
5143527141143527142AC21GENIChomozygous55759608
5143527195143527196TTTTG12GENICpossibly homozygous55759609
5143527395143527396TC15GENIChomozygous55759610
5143527551143527552CT19GENIChomozygous55759611
5143528166143528170ACAT----1GENIChomozygous56570109
5143528419143528420CT24GENIChomozygous55759613
5143528439143528440AT26GENIChomozygous55759614
5143529368143529369CT40GENIChomozygous55759615
5143529811143529812TA16GENIChomozygous55759616
5143530580143530581GA24GENIChomozygous55759617
5143531059143531060TTAAAAAAAAAA6GENIChomozygous55759618
5143531328143531329TC28GENIChomozygous55759619
5143532111143532112TTTTTG32GENICpossibly homozygous55759620
5143532429143532430CT43GENIChomozygous55759621
5143564024143564025AATT10INTERGENICheterozygous55759623
5143564024143564025AAT10INTERGENICheterozygous55912622
5143566084143566092CTTCCTTC--------9INTERGENIChomozygous55759624
5143566356143566357GGGATA5INTERGENIChomozygous56458395
5143566510143566511C-18INTERGENIChomozygous55759629
5143566973143566974GA23INTERGENIChomozygous55759630
5143567116143567117AG28INTERGENIChomozygous55759631
5143568753143568754CT23INTERGENIChomozygous55759632
5143569008143569009GA9INTERGENIChomozygous55759634
5143569082143569083AAAAG6INTERGENICheterozygous56458396
5143569226143569227CCA19INTERGENIChomozygous55759635
5143569353143569354GA26INTERGENIChomozygous55759636
5143570610143570620TTTTTTTTTT----------21INTERGENICheterozygous56458397
5143570611143570620TTTTTTTTT---------21INTERGENICpossibly homozygous56458398
5143570784143570785AT31INTERGENIChomozygous55759638
5143572398143572406TCTCTCTC--------1INTERGENIChomozygous56458399
5143572452143572453AAT8INTERGENICpossibly homozygous55759639
5143572818143572819AAT9INTERGENIChomozygous55759641
5143573621143573622AT12INTERGENIChomozygous55759642
5143574153143574154GC39INTERGENIChomozygous55759643
5143575917143575925GTGTGTGT--------28INTERGENIChomozygous55759644
5143575933143575934GA24INTERGENIChomozygous56067686
5143578320143578321TC28INTERGENIChomozygous55759646
5143578364143578365CT32INTERGENIChomozygous55759647
5143579632143579633GA40INTERGENIChomozygous55759648
5143581191143581192TC38INTERGENIChomozygous55759649
5143582648143582650CA--5INTERGENIChomozygous56458402
5143582979143582980CG34INTERGENIChomozygous55759650
5143584597143584598AG22GENICpossibly homozygous55759651
5143585257143585258C-14GENIChomozygous55759652
5143585689143585690TC33GENICpossibly homozygous55759653
5143585982143585983CT16GENIChomozygous55759654
5143586458143586459AG26GENIChomozygous55759655
5143586963143586964GA24GENIChomozygous55759656
5143587188143587189TTTGTGTG24GENIChomozygous55759657
5143587340143587350GTGTGTGTGT----------20GENICheterozygous56458403
5143587342143587350GTGTGTGT--------20GENICpossibly homozygous56458404
5143587533143587534TC41GENIChomozygous55759660
5143588414143588415CT28GENICpossibly homozygous55759661
5143588450143588451TG21GENIChomozygous55759662
5143588508143588509CT25GENIChomozygous55759663
5143588674143588675T-27GENIChomozygous55759664
5143588944143588945CG25GENIChomozygous55759665
5143589664143589665AG22GENIChomozygous55759666
5143589806143589807TC40GENIChomozygous55759667
5143589869143589870A-25GENIChomozygous55759668
5143589936143589937TC32GENICpossibly homozygous55759669
5143590004143590005TC34GENIChomozygous55759670
5143590685143590686AG24GENIChomozygous55759671
5143591628143591629CT26GENIChomozygous55759672
5143592336143592337TC34GENIChomozygous55759673
5143592653143592654GC25GENIChomozygous55759674
5143592705143592706GC18GENIChomozygous55759675
5143592714143592720TCTCTG------16GENIChomozygous55759676
5143592895143592896TC17GENIChomozygous55759677
5143592953143592954GT17GENIChomozygous55759678
5143593282143593283AG24GENIChomozygous55759679
5143594565143594566TC29GENIChomozygous55759680
5143595235143595236GA22GENIChomozygous55759681
5143597752143597753GA27GENIChomozygous55759682
5143597839143597840GA29GENIChomozygous55759683
5143597869143597870GA24GENIChomozygous55759684
5143597908143597909GGA21GENIChomozygous55759685
5143598363143598364T-16GENIChomozygous55759686
5143598960143598961CA16GENIChomozygous55759687
5143600051143600052TC15GENIChomozygous55759691
5143600230143600231GC21GENIChomozygous55759692
5143601049143601050CCG13GENICheterozygous55759693
5143601049143601050CCGG13GENICheterozygous55759694
5143601188143601189GA16GENIChomozygous55759695
5143601197143601198AG14GENIChomozygous55759696
5143601235143601236TTTCTCTC1GENIChomozygous56494403
5143601302143601304CG--1GENIChomozygous55759698
5143603501143603502GC27GENIChomozygous55759700
5143603842143603843GA25GENIChomozygous55759701
5143604883143604884A-13GENIChomozygous55759702
5143604903143604904GGT22GENIChomozygous55759703
5143604918143604919TC23GENIChomozygous55759704
5143604921143604922CCT24GENIChomozygous55759705
5143605466143605467AG39GENICpossibly homozygous56355264
5143599933143599934GGGCTACAGAACTCCAGTTATGTTCAGATTTAGGGGCACCCACCTTGTCTCACAGAGCCACAAATATGCCTTAGCTGATACATCCTCATAGATAGGTGACATACATTCTCAGACGGCT33GENIChomozygous56355263
5143606072143606073C-4GENICheterozygous56458405
5143606344143606347TTT---9GENICheterozygous55759708
5143606345143606347TT--9GENICheterozygous56458406
5143606747143606748TC20GENIChomozygous55759709
5143608656143608657AG21GENIChomozygous55759710
5143609114143609115TA29GENIChomozygous55759711
5143609833143609834AG26GENICpossibly homozygous55759712
5143610512143610513AT23GENIChomozygous55759713
5143612201143612202CCTGTGTATGTGTG14GENIChomozygous55759718
5143613011143613012AG18INTERGENICpossibly homozygous55759719
5143613270143613271AG33INTERGENIChomozygous55759720
5143613274143613275AG33INTERGENIChomozygous55759721
5143613752143613753AG25INTERGENIChomozygous55759722
5143616136143616137T-7INTERGENICpossibly homozygous56458407
5143614858143614859GA24INTERGENICpossibly homozygous55759723
5143614878143614879CT25INTERGENICpossibly homozygous55759724
5143615772143615773GT19INTERGENIChomozygous55759725
5143616135143616136CCT7INTERGENICheterozygous56683115
5143618348143618349CT12INTERGENIChomozygous55759729
5143618622143618623GA29INTERGENIChomozygous55759732
5143620012143620014GG--10INTERGENICheterozygous56355266
5143620013143620014G-10INTERGENICheterozygous56573967
5143620377143620379AA--15INTERGENIChomozygous55759734
5143620531143620532AG25INTERGENICpossibly homozygous55759736
5143621529143621530AC9INTERGENICpossibly homozygous55759737
5143621616143621622GGGAGA------6INTERGENICheterozygous56458408
5143622371143622372CA23INTERGENIChomozygous55759739
5143622557143622558AG20INTERGENIChomozygous55759740
5143622581143622582AG21INTERGENIChomozygous55759741
5143622934143622935AG28INTERGENIChomozygous55759742
5143623048143623049GA15INTERGENIChomozygous55759743
5143623243143623244TTGTG7INTERGENIChomozygous55759744
5143623348143623349GA26INTERGENIChomozygous55759745
5143624330143624331TG20INTERGENIChomozygous55759750
5143623629143623630G-28INTERGENIChomozygous55759746
5143623694143623695AG29INTERGENIChomozygous55759747
5143623745143623746TA28INTERGENIChomozygous55759748
5143623858143623859GA24INTERGENIChomozygous55759749
5143624432143624433TG19INTERGENIChomozygous55759751
5143624515143624516TA17INTERGENIChomozygous55759752
5143625019143625020GGCGGCAGCTCCTT18INTERGENIChomozygous55759756
5143624771143624772GA19INTERGENIChomozygous55759753
5143624811143624812TC23INTERGENIChomozygous55759754
5143624950143624951AG15INTERGENIChomozygous55759755
5143625181143625182AG25INTERGENIChomozygous55759757
5143625360143625361GGATGACA35INTERGENIChomozygous55759758
5143625377143625378CT37INTERGENIChomozygous55759760
5143626533143626534T-18INTERGENIChomozygous55759761
5143628942143628943CT34INTERGENICpossibly homozygous55759762
5143629100143629101TC29INTERGENIChomozygous55759763
5143630045143630046TC8INTERGENIChomozygous55759764
5143630829143630830GGA17INTERGENICpossibly homozygous55759766
5143630961143630962GGT20INTERGENICpossibly homozygous55759767
5143631031143631032A-20INTERGENICpossibly homozygous55759768
5143631092143631093AC25INTERGENIChomozygous55759769
5143631293143631294CCTTT14INTERGENICpossibly homozygous56458409
5143631294143631305TTTTTTTTTTT-----------14INTERGENICheterozygous55912849
5143632448143632449T-18INTERGENIChomozygous55759770
5143632754143632755AG13INTERGENIChomozygous55759771
5143634421143634422AG23INTERGENIChomozygous55759774
5143634695143634696TC24INTERGENIChomozygous55759775
5143634750143634765TTTCTTTTCTTTTCT---------------12INTERGENIChomozygous56458410
5143637249143637250GT28INTERGENIChomozygous55759779
5143637281143637282AG32INTERGENIChomozygous55759780
5143637980143637981C-23INTERGENIChomozygous55759781
5143638049143638050AG18INTERGENIChomozygous55759782
5143638276143638277GA20INTERGENIChomozygous55759783
5143638334143638335CT24INTERGENIChomozygous55759784
5143638750143638843TCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCC---------------------------------------------------------------------------------------------16INTERGENICpossibly homozygous56458411
5143638855143638864TCCTCCTCC---------12INTERGENICpossibly homozygous56458412
5143638948143639067AAAAGAAGTTTGGGGGGGTTGGGGATTTAGCTCAGCGGTAGAGCGCTTGCCTAGCAAACGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAGAAAAAAAAAAAAAAAAAAAAAA-----------------------------------------------------------------------------------------------------------------------15INTERGENIChomozygous56355267
5143639129143639130CT22INTERGENIChomozygous55759796
5143639575143639576AG15INTERGENIChomozygous55759797
5143639964143639965GGTGTGTGTGTGTGTGTGTGTTTCCATGTGT10INTERGENIChomozygous56458413
5143640178143640210TTGCCTGCGCGCGTGCGTGCGTGCGTGCGTGC--------------------------------3INTERGENIChomozygous56355268
5143640254143640256GC--3INTERGENIChomozygous56355269
5143640333143640375TGTCTTTCTCCATGTGTGAAGAGGTCAGAGGTTAATATCAGG------------------------------------------11INTERGENIChomozygous56355270
5143640615143640616CT10INTERGENIChomozygous55759803
5143640647143640649TT--10INTERGENICheterozygous55759804
5143640648143640649T-10INTERGENICheterozygous55759805
5143640723143640724GA20INTERGENIChomozygous55759806
5143640980143641058AAAGAGTCAGGCGTGGAGACTCGCCACGAAGACGCAGAGAAAGAGTCAGGCTTGGAGACTCGGCGCGAAGACGCAGAA------------------------------------------------------------------------------7INTERGENIChomozygous56458414
5143641078143641081GAG---12INTERGENIChomozygous55759814
5143641603143641604CA28INTERGENIChomozygous55759815
5143642222143642223GA25INTERGENIChomozygous55759816
5143642495143642496GT32INTERGENIChomozygous55759817
5143642811143642812GGATATATATATATATGTAT8INTERGENIChomozygous56458415
5143642840143642841GT12INTERGENIChomozygous55912877
5143643166143643167A-15GENIChomozygous56458416
5143643236143643237CT14GENICpossibly homozygous55759819
5143643306143643307CT20GENICpossibly homozygous55759820
5143643428143643429CG35GENIChomozygous55759821
5143643641143643642CT30GENIChomozygous55759822
5143645053143645054GGA17GENIChomozygous55759823
5143645112143645118AATACT------23GENIChomozygous56458417
5143645119143645120AAGCTT23GENIChomozygous56458418
5143646514143646515AG12INTERGENIChomozygous55759826
5143646681143646682CA15INTERGENIChomozygous55759827
5143646777143646778T-17INTERGENIChomozygous55759828
5143647292143647293GC30INTERGENIChomozygous55759829
5143647301143647305AAAA----27INTERGENIChomozygous55759830
5143647790143647791AC30INTERGENIChomozygous55759831
5143648100143648101CCA35INTERGENICpossibly homozygous55759833
5143648682143648683GA24INTERGENIChomozygous55759834
5143649224143649225GT21INTERGENIChomozygous55759835
5143649566143649570CGTG----10INTERGENICheterozygous56494405
5143649615143649635GAGAGAGAGAGAGAGAGAGA--------------------11INTERGENICpossibly homozygous56458420
5143649617143649635GAGAGAGAGAGAGAGAGA------------------11INTERGENICheterozygous56458421
5143649654143649655AC8INTERGENIChomozygous56458422
5143649660143649662CA--7INTERGENIChomozygous55759836
5143649841143649842GA22GENIChomozygous55759837
5143650275143650276CT18GENIChomozygous55759838
5143650874143650875T-7GENIChomozygous56125364
5143650892143650893T-8GENICheterozygous56494406
5143652921143652922CCT12GENICpossibly homozygous55759839
5143653053143653054TA35GENIChomozygous55759840
5143653704143653706TT--13GENICheterozygous56458423
5143653705143653706T-13GENICheterozygous56458424
5143653825143653828TTT---13GENICpossibly homozygous56125365
5143653991143653992AG15GENIChomozygous55759845
5143654022143654023CT14GENIChomozygous55759846
5143654077143654078TA10GENIChomozygous55759847
5143654078143654079TA10GENIChomozygous55759848
5143654080143654081TA10GENIChomozygous55759849
5143654087143654088TTA10GENIChomozygous55759850
5143654168143654169AG18GENIChomozygous55759851
5143654180143654181CG20GENIChomozygous55759852
5143654658143654659AG15GENIChomozygous55759854
5143656319143656320TC30GENIChomozygous55759855
5143657627143657628AAC13GENIChomozygous55759856
5143657632143657634GC--12GENIChomozygous55759857
5143657643143657644TTC8GENIChomozygous55759858
5143657653143657654A-9GENIChomozygous55759859
5143657656143657658CT--7GENIChomozygous55759860
5143657836143657837G-24GENIChomozygous55759861
5143659534143659536TA--2GENIChomozygous55759862
5143659541143659551TTATTATTAT----------3GENIChomozygous55759863
5143663154143663155TTTGTG16GENICpossibly homozygous55759868
5143663154143663155TTTG16GENICheterozygous55912921
5143663745143663746CCAA5GENICheterozygous55759869
5143663745143663746CCAAA5GENICheterozygous56494407
5143663904143663905AG22GENIChomozygous55759870
5143664036143664037A-11GENIChomozygous55759871
5143664037143664038AT11GENIChomozygous56355271
5143664536143664537AG26GENIChomozygous55759873
5143666012143666020GTGTGTGT--------5INTERGENICheterozygous56458425
5143666014143666020GTGTGT------5INTERGENICheterozygous56458426
5143667065143667066CT9INTERGENIChomozygous56458427
5143667067143667068CT9INTERGENIChomozygous55759875
5143667438143667439AAAAC23INTERGENICpossibly homozygous55759876
5143667576143667588GTGTGTGTGTGT------------14INTERGENIChomozygous56458429
5143668477143668478CG10INTERGENIChomozygous55759880
5143668560143668561G-8INTERGENIChomozygous55759881
5143668685143668686GA15INTERGENIChomozygous55759882
5143670550143670552CC--19INTERGENIChomozygous55759883
5143671237143671238TC41INTERGENIChomozygous55759884
5143671503143671504CA12INTERGENIChomozygous55759885
5143671720143671721TG10INTERGENIChomozygous55759887
5143672642143672643T-22INTERGENICpossibly homozygous55759888
5143673436143673437CA11INTERGENIChomozygous56458430
5143673440143673445AAAAA-----6INTERGENIChomozygous55759891
5143673735143673736A-16INTERGENIChomozygous56067692
5143674747143674753GTGTGT------16INTERGENICheterozygous55759892
5143674749143674753GTGT----16INTERGENICpossibly homozygous55759893
5143675060143675074TGTGTGTGTGTGTG--------------18INTERGENICheterozygous56532292
5143675062143675074TGTGTGTGTGTG------------18INTERGENICheterozygous56458431
5143676382143676383AG26INTERGENIChomozygous55759895
5143677942143677943AT47INTERGENICpossibly homozygous55759901
5143677946143677948GG--50INTERGENICpossibly homozygous56355272
5143677949143677950GGAAA50INTERGENICpossibly homozygous56355273
5143677951143677952GA53INTERGENICpossibly homozygous56355274
5143678337143678338GA39INTERGENIChomozygous55759904
5143678734143678735AG26GENIChomozygous55759905
5143679011143679012AG26GENIChomozygous55759906
5143679958143679959TC23GENIChomozygous55759907
5143680636143680638TG--2GENIChomozygous55759908
5143680670143680696TATATATATATATATATATATATATA--------------------------3GENICheterozygous56618666
5143680672143680696TATATATATATATATATATATATA------------------------3GENICheterozygous56494408
5143680925143680926T-4GENICheterozygous56458433
5143682145143682146TC22GENIChomozygous55759909
5143688288143688289AG20GENIChomozygous55759913
5143682560143682594TACAATGAGGCTGCTTACCTGAGTGAGGTTCCAC----------------------------------18GENIChomozygous56355275
5143682728143682729CT22GENIChomozygous55759911
5143686807143686808GT30GENIChomozygous55759912
5143688655143688656GT31GENIChomozygous55759914
5143689205143689206AATG39GENICheterozygous55759915
5143689205143689206AATGTG39GENICpossibly homozygous55759916
5143689350143689358AGAGAGAG--------11GENICheterozygous56458434
5143689352143689358AGAGAG------11GENICheterozygous56458435
5143690244143690245GGTTTTTTTTTTGT9GENIChomozygous56458436
5143690736143690737AAT40GENIChomozygous55759917
5143693448143693449GGA9GENICpossibly homozygous55759918
5143693668143693669TTAAAACAAGGAAGA33GENIChomozygous55759919
5143693693143693694GC39GENIChomozygous55759920
5143696459143696460CG25GENIChomozygous55759921
5143696798143696799GA31GENIChomozygous55759922
5143697731143697732TC41GENICpossibly homozygous55759923
5143698524143698525CT33GENIChomozygous55759924
5143703805143703806A-22GENIChomozygous55912992
5143704426143704427TC23GENIChomozygous55759925
5143704543143704544TC17GENIChomozygous55759926
5143705116143705117GGAA16GENIChomozygous55759927
5143705391143705394CTC---3GENIChomozygous55759928
5143705594143705595CCGA26GENIChomozygous55759929
5143705745143705746CT28GENIChomozygous55759930
5143705936143705937CT32GENIChomozygous55759931
5143706549143706550TC24GENIChomozygous55759932
5143706558143706559TC27GENIChomozygous55759933
5143706582143706583TC23GENICpossibly homozygous55759934
5143706585143706586TC23GENICpossibly homozygous55759936
5143707635143707636CT33GENIChomozygous55759938
5143708056143708072AGATAGATAGATAGAT----------------10GENIChomozygous56458439
5143708186143708187AAAC25GENICpossibly homozygous55759940
5143708838143708839CT44GENIChomozygous55759941
5143709481143709482TTC23GENIChomozygous55759942
5143709483143709484TTC18GENICpossibly homozygous56458440
5143709500143709503AAA---19GENICpossibly homozygous55759944
5143709512143709513AC19GENIChomozygous56458441
5143710055143710056AT37GENIChomozygous55759945
5143710375143710376AAATGGC48GENIChomozygous55759946
5143711173143711174TTA31GENIChomozygous55759947
5143713452143713453AG35GENIChomozygous55759948
5143713656143713657GA32GENIChomozygous55759949