chr start stop reference nuc variant nuc depth genic status zygosity variant ID 5 159968938 159968939 T - 8 GENIC homozygous 55814922 5 159970161 159970162 A ATTTT 33 GENIC homozygous 56462934 5 159970654 159970655 T C 37 GENIC homozygous 55814924 5 159970932 159970933 G A 22 GENIC homozygous 55814925 5 159971276 159971277 T TTTCC 10 GENIC homozygous 55814926 5 159971287 159971288 G A 9 GENIC homozygous 55814927 5 159971463 159971464 C G 9 GENIC possibly homozygous 56359004 5 159971604 159971605 G A 15 GENIC homozygous 55814929 5 159971979 159971981 AT -- 26 GENIC homozygous 55814930 5 159972424 159972425 T C 9 GENIC homozygous 55814931 5 159972599 159972600 A - 7 GENIC homozygous 55814932 5 159973375 159973376 C - 33 GENIC homozygous 55814933 5 159973390 159973391 G A 31 GENIC homozygous 55814934 5 159973450 159973451 G C 10 GENIC homozygous 55814935 5 159973451 159973452 G A 10 GENIC homozygous 55814936 5 159973566 159973567 T A 22 GENIC homozygous 55814937 5 159973672 159973673 A G 27 GENIC homozygous 55814938 5 159975844 159975845 A G 24 GENIC homozygous 55814939 5 159976925 159976926 T C 26 GENIC homozygous 55814940 5 159977405 159977406 A G 16 GENIC homozygous 55814941 5 159977645 159977646 G A 17 GENIC homozygous 55814942 5 159979156 159979157 C T 25 GENIC homozygous 55814943 5 159979202 159979203 C G 31 GENIC homozygous 55814944 5 159979294 159979295 G A 26 GENIC homozygous 55814945 5 159979749 159979750 G GT 26 GENIC homozygous 55814946 5 159980178 159980179 C CTAT 19 GENIC heterozygous 56462935 5 159980530 159980531 G T 30 GENIC homozygous 55814949 5 159980947 159980948 T C 29 GENIC possibly homozygous 55814950 5 159982105 159982106 G GGTGTGTGTGTGTGT 10 GENIC heterozygous 56495881 5 159982118 159982122 GTGT ---- 10 GENIC possibly homozygous 56462936 5 159982459 159982460 A AT 20 GENIC homozygous 55814952 5 159982754 159982755 A G 49 GENIC homozygous 55814953 5 159984339 159984340 A C 8 GENIC homozygous 55814954 5 159985562 159985564 CC -- 10 GENIC possibly homozygous 56570396 5 159985565 159985575 TTCTTTCTTC ---------- 10 GENIC possibly homozygous 56570397 5 159986291 159986292 A G 30 GENIC homozygous 55814956 5 159986438 159986439 G GCT 4 GENIC heterozygous 56495883 5 159986576 159986577 C T 33 GENIC homozygous 55814957 5 159986723 159986724 C T 31 GENIC homozygous 55814958 5 159987494 159987496 TG -- 42 GENIC homozygous 55814959 5 159988631 159988632 G A 26 GENIC homozygous 55814960 5 159989842 159989843 G A 22 GENIC homozygous 55814961 5 159989857 159989858 G A 21 GENIC homozygous 55814962 5 159990125 159990126 T C 22 GENIC homozygous 55814963 5 159990510 159990511 C T 25 GENIC homozygous 55814964 5 159990533 159990534 G GCC 8 GENIC heterozygous 55814965 5 159990533 159990534 G GC 8 GENIC heterozygous 55939468 5 159991076 159991077 G GGGGGAGGGGAGA 4 GENIC homozygous 56462940 5 159991081 159991082 C G 6 GENIC homozygous 56462941 5 159991083 159991093 CCACCCCCCC ---------- 6 GENIC homozygous 55814967 5 159991112 159991113 T G 7 GENIC homozygous 55814969 5 159991122 159991123 T G 5 GENIC homozygous 55814971 5 159991127 159991128 T G 8 GENIC homozygous 55814972 5 159991374 159991375 A G 25 GENIC homozygous 55814973 5 159991376 159991377 C T 26 GENIC homozygous 55814974 5 159992089 159992090 T C 41 GENIC homozygous 55814975 5 159992770 159992771 C - 31 GENIC homozygous 55814976 5 159992772 159992773 C - 31 GENIC homozygous 55814977 5 159992785 159992795 TCTCTCTCTC ---------- 14 GENIC heterozygous 56462942 5 159992787 159992795 TCTCTCTC -------- 14 GENIC possibly homozygous 56462943 5 159993910 159993911 T C 26 GENIC homozygous 55814979 5 159994030 159994031 A C 14 GENIC homozygous 55814980 5 159994284 159994285 G A 29 GENIC homozygous 55814981 5 159994559 159994560 A G 21 GENIC homozygous 55814982 5 159996772 159996773 C T 30 GENIC homozygous 55814983 5 159997758 159997759 A C 17 GENIC homozygous 55814985 5 159998255 159998256 C T 36 GENIC homozygous 55814986 5 159998256 159998257 C T 37 GENIC homozygous 55814987 5 159998349 159998350 G T 23 GENIC homozygous 55814988 5 159998725 159998726 T - 23 GENIC homozygous 55814989 5 159998727 159998728 C G 22 GENIC homozygous 56359087 5 159999005 159999006 T G 30 GENIC homozygous 55814990 5 159999827 159999828 G GAA 27 GENIC possibly homozygous 55814991 5 160000388 160000389 G A 36 GENIC homozygous 55814993 5 160000417 160000418 G A 29 GENIC homozygous 55814994 5 160002062 160002063 G A 31 GENIC homozygous 55814995 5 160002790 160002791 A G 27 GENIC homozygous 55814996 5 160003002 160003003 C A 23 GENIC homozygous 55814997 5 160003036 160003037 C T 23 GENIC homozygous 55814998 5 160003044 160003045 G A 23 GENIC homozygous 55814999 5 160003162 160003163 T - 20 GENIC homozygous 55815001 5 160003810 160003811 C G 40 GENIC homozygous 55815002 5 160004128 160004129 C T 26 GENIC homozygous 55815003 5 160004513 160004514 C A 35 GENIC homozygous 55815004 5 160004746 160004747 T G 33 GENIC homozygous 55815005 5 160004809 160004817 GACTGACT -------- 17 GENIC homozygous 56359115 5 160005053 160005054 C G 27 GENIC homozygous 55815008 5 160005781 160005782 C CT 31 GENIC homozygous 55815009 5 160005782 160005783 G T 32 GENIC homozygous 56359119 5 160006050 160006119 GCCTTGAACTCACTATCTCTGAGGATGGTCCTTCTGCCTCTACTTTTTTGAGACAGGGTCTCAGGTTGC --------------------------------------------------------------------- 9 GENIC homozygous 56462944 5 160006302 160006303 C T 21 GENIC homozygous 55815011 5 160006458 160006459 A G 19 GENIC homozygous 55815012 5 160006607 160006608 G A 33 GENIC homozygous 55815013 5 160006613 160006614 G A 34 GENIC homozygous 55815014 5 160006631 160006632 G T 31 GENIC homozygous 55815015 5 160006668 160006669 A G 19 GENIC homozygous 55815016 5 160006686 160006687 G A 20 GENIC homozygous 55815017 5 160006712 160006713 G T 19 GENIC homozygous 55815018 5 160006731 160006732 G A 23 GENIC homozygous 55815019 5 160006819 160006820 T G 27 GENIC homozygous 55815020 5 160009082 160009092 CTCTCTCTCT ---------- 5 GENIC heterozygous 55815021 5 160010325 160010342 CACCCCCTGTGTGCAAA ----------------- 18 GENIC homozygous 56359121 5 160011449 160011454 ACCCC ----- 26 GENIC homozygous 55815027 5 160011586 160011587 T C 23 GENIC homozygous 55815028 5 160012063 160012065 CA -- 27 GENIC homozygous 56462945 5 160012289 160012290 C CGT 15 GENIC heterozygous 55815031 5 160012732 160012733 C T 30 GENIC homozygous 55815032 5 160013176 160013177 G A 28 GENIC homozygous 55815033 5 160013935 160013936 A G 15 GENIC homozygous 55815034 5 160014694 160014695 G T 29 GENIC homozygous 55815035 5 160015805 160015817 ACACAGACACAC ------------ 26 GENIC homozygous 55815036 5 160016409 160016410 T TTGTGTGTG 13 GENIC possibly homozygous 56462946 5 160017781 160017782 A G 28 GENIC homozygous 55815037 5 160017785 160017786 G C 25 GENIC homozygous 55815038 5 160017796 160017797 A G 21 GENIC homozygous 55815039 5 160017910 160017911 G A 29 GENIC homozygous 55815040 5 160018023 160018024 G A 16 GENIC homozygous 55815041 5 160018431 160018432 C CTCTACCCCTCCCCCTCCCTCTTCCCCCCTCCTCTCCCTCTCTCTT 7 GENIC homozygous 56462947 5 160018846 160018848 CT -- 14 GENIC homozygous 55815043 5 160019728 160019729 C CT 6 GENIC heterozygous 55815046 5 160019728 160019729 C CTTT 6 GENIC heterozygous 56462948 5 160020859 160020860 T C 29 GENIC homozygous 55815047 5 160021734 160021735 G A 9 GENIC homozygous 55815048 5 160021879 160021880 C T 14 GENIC homozygous 55815049 5 160022609 160022610 T - 16 GENIC heterozygous 55815050 5 160022642 160022643 G A 17 GENIC homozygous 55815051 5 160022694 160022695 A G 21 GENIC homozygous 55815052 5 160022699 160022700 A G 23 GENIC homozygous 55815053 5 160022718 160022719 T C 16 GENIC homozygous 55815054 5 160024388 160024389 G C 29 GENIC homozygous 55815055 5 160024494 160024497 TTT --- 6 GENIC heterozygous 56462949 5 160025078 160025079 C T 33 GENIC homozygous 55815056 5 160025366 160025367 A G 33 GENIC homozygous 55815057 5 160026419 160026420 A G 22 GENIC homozygous 55815058 5 160016409 160016410 T TTGTG 13 GENIC heterozygous 56687256 5 160027697 160027702 TTTTG ----- 12 GENIC homozygous 55815061 5 160026974 160026975 G A 23 GENIC homozygous 55815059 5 160027374 160027376 TT -- 20 GENIC heterozygous 56462950 5 160027375 160027376 T - 20 GENIC heterozygous 56462951 5 160027912 160027913 A G 35 GENIC homozygous 55815062 5 160028294 160028295 T TCA 29 GENIC homozygous 55815063 5 160028362 160028370 CTCTCACA -------- 23 GENIC homozygous 55815064 5 160028535 160028536 A ACACACACT 19 GENIC homozygous 56359125 5 160028621 160028622 C CAT 9 GENIC heterozygous 55815066 5 160030144 160030146 CT -- 21 GENIC heterozygous 56554764 5 160030406 160030407 G A 17 GENIC homozygous 55815069 5 160032290 160032291 C A 24 GENIC homozygous 55815070 5 160032869 160032870 A G 27 GENIC homozygous 55815071 5 160032896 160032897 C G 22 GENIC homozygous 55815072 5 160033003 160033004 G A 23 GENIC homozygous 55815073 5 160033556 160033557 C G 12 GENIC homozygous 55815074 5 160034607 160034608 G A 35 GENIC homozygous 55815075 5 160034899 160034900 C CA 38 GENIC homozygous 55815076 5 160034919 160034920 T C 38 GENIC homozygous 55815077 5 160035599 160035600 G A 32 GENIC homozygous 55815078 5 160036189 160036190 G A 29 GENIC homozygous 55815079 5 160036801 160036817 GTGTGTGTGTGTGTGT ---------------- 9 GENIC heterozygous 56359132 5 160036803 160036817 GTGTGTGTGTGTGT -------------- 9 GENIC heterozygous 56462952 5 160037124 160037125 T A 16 GENIC homozygous 55815081 5 160037135 160037136 A AACACACACAC 12 GENIC homozygous 56462953 5 160038400 160038401 C T 29 GENIC homozygous 55815083 5 160038652 160038653 A AGT 13 GENIC homozygous 55815084 5 160038678 160038696 GTGTGTGTGTGTGTGTGT ------------------ 6 GENIC homozygous 56462955 5 160039006 160039007 C A 15 GENIC homozygous 55815085 5 160042546 160042547 A AGTGT 4 GENIC heterozygous 56462956 5 160042553 160042555 GT -- 4 GENIC heterozygous 56462957 5 160042607 160042608 A G 24 GENIC possibly homozygous 55815088 5 160043578 160043579 C CTT 24 GENIC homozygous 55815089 5 160043712 160043715 TTT --- 14 GENIC heterozygous 56462958 5 160043713 160043715 TT -- 14 GENIC possibly homozygous 56462959 5 160044050 160044055 TTCTG ----- 1 GENIC homozygous 56580440 5 160044813 160044814 T TACACACACAC 5 GENIC homozygous 56462961 5 160045060 160045061 A G 33 GENIC homozygous 55815092 5 160046188 160046192 TTTG ---- 20 GENIC homozygous 55815093 5 160047060 160047062 TG -- 16 GENIC homozygous 55815094 5 160047242 160047243 A - 4 GENIC heterozygous 55815095 5 160047561 160047562 G A 34 GENIC homozygous 55815096 5 160047934 160047935 C T 35 GENIC homozygous 55815097 5 160048503 160048504 C T 25 GENIC homozygous 55815098 5 160048537 160048538 G A 36 GENIC homozygous 55815099 5 160048597 160048598 T - 28 GENIC homozygous 55815100 5 160049026 160049027 A - 28 GENIC possibly homozygous 55815101 5 160049113 160049114 T G 25 GENIC homozygous 55815102 5 160049325 160049326 A T 30 GENIC homozygous 55815103 5 160049388 160049389 G A 37 GENIC homozygous 55815104 5 160049500 160049501 G A 22 GENIC homozygous 55815105 5 160049553 160049554 C CGTGTGTGTGTGT 7 GENIC possibly homozygous 56462962 5 160049553 160049554 C CGTGTGTGTGT 7 GENIC heterozygous 56554768 5 160049957 160049958 A G 26 GENIC homozygous 55815107 5 160051933 160051934 A G 20 GENIC homozygous 55815110 5 160052007 160052008 C CGTGT 15 GENIC homozygous 56462963 5 160052043 160052045 TA -- 23 GENIC heterozygous 56462964 5 160052053 160052056 TGT --- 26 GENIC heterozygous 56462965 5 160052157 160052158 G A 21 GENIC homozygous 55815114 5 160052317 160052318 G C 16 GENIC homozygous 55815115 5 160052751 160052752 G C 19 GENIC homozygous 55815116 5 160053013 160053014 A G 25 GENIC homozygous 55815117 5 160054244 160054245 T C 24 GENIC homozygous 55815118 5 160054504 160054505 T C 28 GENIC homozygous 55815119 5 160054835 160054836 C G 32 GENIC homozygous 55815120 5 160055175 160055176 G A 23 GENIC homozygous 55815121 5 160057270 160057271 T C 29 GENIC homozygous 55815122 5 160057549 160057550 G GA 25 GENIC homozygous 55815123 5 160057580 160057581 T C 31 GENIC homozygous 55815124 5 160057975 160057976 A G 27 GENIC homozygous 55815125 5 160058052 160058053 C G 34 GENIC homozygous 55815126 5 160058356 160058357 G A 23 GENIC homozygous 55815127 5 160059080 160059081 C T 31 GENIC homozygous 55815128 5 160059659 160059660 G GAAAGA 16 GENIC homozygous 55815129 5 160060219 160060220 C CTT 14 GENIC possibly homozygous 55815130 5 160060219 160060220 C CTTT 14 GENIC heterozygous 56570399 5 160060488 160060489 A - 11 GENIC heterozygous 56359138 5 160060504 160060505 G GA 10 GENIC homozygous 55815131 5 160062261 160062262 G A 20 GENIC homozygous 55815136 5 160060525 160060526 T - 13 GENIC homozygous 55815132 5 160061694 160061703 GTTTTTTTT --------- 35 GENIC homozygous 55815133 5 160061718 160061719 T TG 32 GENIC homozygous 55815134 5 160062260 160062261 T C 19 GENIC homozygous 55815135 5 160062452 160062458 TTTTTT ------ 16 GENIC heterozygous 56462966 5 160063354 160063355 A G 39 GENIC homozygous 55815137 5 160064175 160064176 A G 29 GENIC homozygous 55815138 5 160064436 160064437 A G 39 GENIC homozygous 55815139 5 160065534 160065535 C T 26 GENIC homozygous 55815140 5 160065588 160065589 T TAAA 34 GENIC possibly homozygous 55815141 5 160066158 160066178 TGCGTGCGTGCGTGCGTGCG -------------------- 7 GENIC homozygous 56462967 5 160066353 160066356 ATG --- 26 GENIC homozygous 55815147 5 160066646 160066651 CTGTC ----- 22 GENIC homozygous 55815148 5 160067276 160067277 A G 19 GENIC homozygous 55815149 5 160067297 160067298 G C 11 GENIC homozygous 55815150 5 160067486 160067487 T C 34 GENIC homozygous 55815151 5 160068404 160068405 A G 23 GENIC homozygous 55815152 5 160068653 160068654 T A 15 GENIC homozygous 55815153 5 160072755 160072756 T G 20 GENIC homozygous 55815154 5 160072757 160072758 G C 22 GENIC homozygous 55815155 5 160072827 160072828 T TTCCTCTTCC 4 GENIC homozygous 56462968 5 160072857 160072858 T C 11 GENIC homozygous 55815157 5 160072907 160072908 C A 29 GENIC homozygous 55815158 5 160073228 160073229 G GGA 4 GENIC heterozygous 56462969 5 160073228 160073229 G GGAGAGA 4 GENIC heterozygous 56462970 5 160073460 160073461 G A 21 GENIC homozygous 55815160 5 160073806 160073807 C T 21 GENIC homozygous 55815162 5 160073824 160073825 C G 25 GENIC homozygous 55815163 5 160073964 160073965 T - 30 GENIC possibly homozygous 56462971 5 160074169 160074170 G T 24 GENIC homozygous 55815165 5 160074204 160074205 C - 34 GENIC homozygous 55815166 5 160074233 160074234 A G 39 GENIC homozygous 55815167 5 160074257 160074258 T C 36 GENIC homozygous 55815168 5 160074504 160074505 A G 17 GENIC homozygous 55815169