chr start stop reference nuc variant nuc depth genic status zygosity variant ID 4 60553069 60553070 C CT 7 GENIC heterozygous 57835598 4 60553070 60553071 T - 7 GENIC heterozygous 57733128 4 60562552 60562553 C CT 12 GENIC homozygous 56913536 4 60562557 60562558 C CA 12 GENIC homozygous 56913537 4 60564517 60564518 G GT 3 GENIC homozygous 57932369 4 60571068 60571069 T TAC 11 GENIC homozygous 58915094 4 60571894 60571895 A C 22 GENIC homozygous 56913555 4 60576785 60576786 C - 7 GENIC homozygous 58678421 4 60579927 60579929 TG -- 9 GENIC heterozygous 58723664 4 60580747 60580748 C CTTTTTTTTTTT 3 GENIC homozygous 58336215 4 60583877 60583878 T TG 15 GENIC homozygous 56913593 4 60583783 60583784 C G 18 GENIC homozygous 56913591 4 60583801 60583802 C G 20 GENIC homozygous 56913592 4 60591518 60591519 A AT 28 GENIC homozygous 56913630 4 60595447 60595467 TCCCCTCCCCTCCCTTCCCT -------------------- 1 GENIC homozygous 58703522 4 60596685 60596687 AC -- 6 GENIC heterozygous 59236758 4 60612196 60612197 C A 14 GENIC homozygous 56913764 4 60612204 60612205 T A 15 GENIC homozygous 56913765 4 60612206 60612207 T A 15 GENIC homozygous 56913766 4 60612209 60612210 G T 15 GENIC homozygous 56913767 4 60612216 60612217 G T 13 GENIC homozygous 56913768 4 60612227 60612228 C A 13 GENIC homozygous 56913769 4 60612233 60612234 G A 13 GENIC homozygous 56913770 4 60629592 60629593 G GT 10 GENIC homozygous 56913816 4 60637148 60637149 C CCGTGTGTACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTTTGATTGGTTTCTGAATGTTTCCAAATGTATGCTAAATTTAAAATGGGTTTTAAGTTGCCTTTT 11 GENIC homozygous 58336227 4 60639108 60639109 T TTCTA 8 GENIC homozygous 59236761 4 60643342 60643350 TCTCTCTC -------- 3 GENIC homozygous 58406815 4 60647177 60647178 A - 23 GENIC homozygous 57932480 4 60660953 60660954 T - 16 GENIC heterozygous 58443777 4 60687893 60687894 G A 12 GENIC heterozygous 56914029 4 60687911 60687912 G A 13 GENIC heterozygous 58336240 4 60687915 60687916 G A 13 GENIC heterozygous 58336241 4 60687918 60687919 C A 13 GENIC heterozygous 58336242 4 60687921 60687922 G GAAGGAAGGAAGAAAGGAA 5 GENIC heterozygous 58336243 4 60687921 60687922 G GAAGGAAGAAAGGAAGGAAGGAAGGAAGGAA 5 GENIC heterozygous 58723668 4 60687923 60687924 C - 13 GENIC homozygous 58336244 4 60687926 60687927 C CTTTATAGT 13 GENIC homozygous 58336245 4 60687927 60687928 C T 13 GENIC homozygous 58336246 4 60687930 60687931 C CCGT 13 GENIC homozygous 58336247 4 60687932 60687933 C G 13 GENIC homozygous 58336248 4 60687935 60687936 T TCTGCTG 13 GENIC homozygous 58336249 4 60687937 60687938 A ATTAGCTGAAGATGGATCTAGGCC 13 GENIC homozygous 58279780 4 60688730 60688734 TATT ---- 3 GENIC homozygous 58657410 4 60708264 60708265 C CTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCA 19 GENIC homozygous 58336253 4 60708270 60708272 GC -- 18 GENIC homozygous 56914124 4 60717268 60717269 C CA 3 GENIC heterozygous 58657416 4 60717269 60717276 AAAAAAA ------- 3 GENIC heterozygous 58150597 4 60743294 60743295 A - 5 GENIC heterozygous 58150607 4 60750348 60750349 C A 18 GENIC homozygous 56914244 4 60750352 60750353 G - 18 GENIC homozygous 56914245 4 60750354 60750355 G T 18 GENIC homozygous 58336254 4 60750376 60750377 G T 16 GENIC homozygous 56914247 4 60750379 60750380 T - 15 GENIC homozygous 56914248 4 60756152 60756153 T - 9 GENIC homozygous 56914272 4 60756158 60756159 G - 10 GENIC homozygous 56914273 4 60758717 60758719 TG -- 7 GENIC heterozygous 58406816 4 60766289 60766290 G A 14 GENIC homozygous 56914334 4 60767381 60767382 C CAAAAA 5 GENIC heterozygous 58336260 4 60781116 60781117 T TCC 21 GENIC homozygous 56914409 4 60781117 60781118 A T 19 GENIC homozygous 58336268 4 60814162 60814163 G A 17 GENIC heterozygous 56914450 4 60860366 60860368 TT -- 16 INTERGENIC heterozygous 58465291 4 60860367 60860368 T - 16 INTERGENIC heterozygous 56914619 4 60863920 60863921 C T 9 INTERGENIC homozygous 58336282 4 60864001 60864002 G - 9 INTERGENIC homozygous 58336283 4 60864022 60864023 G - 9 INTERGENIC homozygous 56914637 4 60864051 60864052 T - 7 INTERGENIC homozygous 56914638 4 60864054 60864055 T - 6 INTERGENIC homozygous 56914639 4 60868353 60868354 G GAAATGTATATAAGAAATACTCAAGTTAATAAAAAAAAAAA 8 INTERGENIC homozygous 58723672 4 60868635 60868636 G T 32 INTERGENIC homozygous 59236764 4 60890293 60890294 A AGT 3 INTERGENIC heterozygous 58076287 4 60890625 60890626 G - 3 INTERGENIC homozygous 56914697 4 60890632 60890633 C - 3 INTERGENIC homozygous 56914698 4 60890639 60890640 C - 1 INTERGENIC homozygous 56914699 4 60890642 60890644 AC -- 1 INTERGENIC homozygous 56914700 4 60890647 60890648 C T 1 INTERGENIC homozygous 58336289 4 60890649 60890655 CCCCCC ------ 1 INTERGENIC homozygous 58336290 4 60890654 60890655 C CTTTT 1 INTERGENIC homozygous 58336291 4 60890659 60890660 C - 1 INTERGENIC homozygous 58336292 4 60890661 60890662 C - 1 INTERGENIC homozygous 58406823 4 60890672 60890673 G - 1 INTERGENIC homozygous 56914701 4 60890679 60890680 C - 1 INTERGENIC homozygous 56914702 4 60890682 60890683 C - 1 INTERGENIC homozygous 56914703 4 60890684 60890685 C A 1 INTERGENIC homozygous 58406824 4 60890687 60890690 ACT --- 1 INTERGENIC homozygous 56914704 4 60899256 60899257 T TA 10 INTERGENIC heterozygous 58657452 4 60908974 60908975 G - 20 INTERGENIC homozygous 56914750 4 60914512 60914513 G - 16 GENIC homozygous 56914768 4 60914513 60914514 G A 16 GENIC homozygous 58336295 4 60914515 60914516 G A 17 GENIC homozygous 58336296 4 60914516 60914517 G T 17 GENIC homozygous 58336297 4 60915754 60915755 C CCTCCT 18 GENIC homozygous 58336298 4 60920053 60920059 TGTGTG ------ 8 GENIC heterozygous 58336300 4 60920057 60920059 TG -- 8 GENIC heterozygous 58567384 4 60923329 60923330 T TA 11 GENIC homozygous 58678422 4 60924264 60924265 G GCA 8 GENIC heterozygous 57933091 4 60929002 60929003 C CAAAAAA 7 GENIC heterozygous 58279815 4 60933939 60933940 G GT 4 GENIC heterozygous 58336304 4 60950294 60950295 C - 14 GENIC homozygous 59236767 4 60953296 60953304 GTGTGTGT -------- 11 GENIC heterozygous 58538721 4 60953298 60953304 GTGTGT ------ 11 GENIC heterozygous 58587467 4 60953300 60953304 GTGT ---- 11 GENIC heterozygous 58915162 4 60963208 60963209 T TTC 31 GENIC homozygous 56914889 4 60968888 60968889 C - 18 GENIC homozygous 56914893 4 60968902 60968903 C - 18 GENIC homozygous 56914894 4 60981208 60981209 C T 13 GENIC homozygous 56914906 4 60984745 60984746 A AG 17 GENIC heterozygous 56914919 4 60993230 60993234 GATG ---- 4 GENIC homozygous 57835607 4 60994739 60994740 G C 10 GENIC heterozygous 56914933 4 61000903 61000904 A - 7 GENIC homozygous 56914943 4 61003809 61003810 G GAC 18 GENIC homozygous 56914949 4 61010001 61010002 G GA 19 GENIC homozygous 56914954 4 61010007 61010008 G GA 21 GENIC homozygous 56914955 4 61015946 61015947 C T 31 GENIC homozygous 56914968 4 61024459 61024460 C T 25 GENIC homozygous 56914975 4 61038056 61038057 A T 5 GENIC homozygous 58279833 4 61038055 61038056 A ATG 5 GENIC homozygous 56914989 4 61042876 61042877 T - 11 GENIC heterozygous 58465296 4 61064043 61064044 C T 26 GENIC possibly homozygous 59236770 4 61064044 61064045 A G 26 GENIC possibly homozygous 59236773 4 61067510 61067513 TGT --- 20 GENIC homozygous 58587488 4 61069460 61069461 A - 16 GENIC heterozygous 58150884 4 61072105 61072109 GTGT ---- 2 GENIC homozygous 59236776 4 61097814 61097816 CC -- 6 INTERGENIC heterozygous 58336336 4 61098039 61098040 C - 8 INTERGENIC possibly homozygous 59236779 4 61102071 61102072 G GGA 5 INTERGENIC heterozygous 59007568 4 61106181 61106182 A AAC 4 INTERGENIC heterozygous 58587494 4 61111504 61111505 T TCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGA 9 INTERGENIC homozygous 58336342 4 61117808 61117809 G GT 23 INTERGENIC homozygous 56915048 4 61118298 61118300 AC -- 2 INTERGENIC heterozygous 58443789 4 61121085 61121086 T TA 12 GENIC homozygous 56915056 4 61121169 61121170 C G 8 GENIC homozygous 56915057 4 61121180 61121181 C G 6 GENIC homozygous 56915058 4 61121181 61121182 C T 6 GENIC homozygous 56915059 4 61121186 61121187 T G 7 GENIC homozygous 57329698 4 61121187 61121188 T A 7 GENIC homozygous 57329700 4 61121188 61121189 T G 7 GENIC homozygous 58336343 4 61121190 61121191 T G 7 GENIC homozygous 57329702 4 61121196 61121197 T A 6 GENIC homozygous 56915060 4 61121198 61121199 C A 6 GENIC homozygous 56915061 4 61121211 61121212 C T 7 GENIC homozygous 57329704 4 61121242 61121243 G A 7 GENIC homozygous 57329706 4 61121243 61121244 C A 7 GENIC homozygous 57329708 4 61121259 61121260 C T 7 GENIC homozygous 58279837 4 61121261 61121262 C A 7 GENIC homozygous 58336344 4 61121262 61121263 T G 7 GENIC homozygous 58336345 4 61121267 61121268 C G 7 GENIC homozygous 58336346 4 61121268 61121269 G T 7 GENIC homozygous 58336347 4 61121269 61121270 C T 7 GENIC homozygous 58336348 4 61121305 61121306 G - 3 GENIC homozygous 56915062 4 61121311 61121312 C - 3 GENIC homozygous 56915063 4 61121324 61121325 A - 3 GENIC homozygous 57484283 4 61121325 61121326 C T 3 GENIC homozygous 58336349 4 61121334 61121335 C G 2 GENIC homozygous 58336350 4 61121335 61121336 G C 2 GENIC homozygous 58336351 4 61121340 61121341 G - 1 GENIC homozygous 57484285 4 61121342 61121343 G GC 1 GENIC homozygous 57484287 4 61121346 61121347 G T 1 GENIC homozygous 57484289 4 61132527 61132528 T TAC 8 GENIC heterozygous 58336353 4 61133168 61133169 T TAC 13 GENIC heterozygous 56915086 4 61121244 61121245 G T 6 GENIC homozygous 57329710 4 61121246 61121247 G T 6 GENIC homozygous 57329712 4 61121279 61121280 G A 7 GENIC homozygous 57329714 4 61121288 61121289 G T 5 GENIC homozygous 57329716 4 61138572 61138573 G T 25 GENIC homozygous 56915104 4 61138575 61138576 A AT 25 GENIC homozygous 56915105 4 61138593 61138594 G - 21 GENIC homozygous 56915106 4 61138818 61138819 C A 18 GENIC homozygous 56915107 4 61138821 61138822 C A 17 GENIC homozygous 56915108 4 61138831 61138832 T A 14 GENIC homozygous 56915109 4 61138836 61138837 G C 14 GENIC homozygous 56915110 4 61138838 61138839 A C 13 GENIC homozygous 56915111 4 61138879 61138880 G A 10 GENIC homozygous 56915112 4 61138893 61138894 G A 9 GENIC homozygous 56915113 4 61146821 61146822 C - 22 GENIC homozygous 56915123 4 61147077 61147079 TT -- 5 GENIC homozygous 58587506 4 61147094 61147095 G T 9 GENIC homozygous 58336360 4 61151845 61151849 CACA ---- 11 GENIC heterozygous 58336362 4 61160501 61160502 C CAG 15 GENIC homozygous 56915146 4 61163461 61163462 T TTCTA 14 GENIC homozygous 59236782 4 61174399 61174400 A - 10 GENIC homozygous 56915192 4 61174542 61174543 G GT 12 GENIC homozygous 56915193 4 61174553 61174554 A - 16 GENIC homozygous 56915194 4 61174603 61174604 T C 16 GENIC homozygous 56915195 4 61182464 61182465 T TACAC 1 GENIC homozygous 58587514 4 61187804 61187810 AAAAAA ------ 19 GENIC homozygous 58336369 4 61187809 61187810 A AGCTTTG 18 GENIC homozygous 58336370 4 61188821 61188822 G GT 6 GENIC homozygous 56915212 4 61188839 61188840 C - 3 GENIC homozygous 56915213 4 61190807 61190808 G A 8 GENIC heterozygous 56915239 4 61190821 61190822 A G 8 GENIC heterozygous 56915240 4 61190824 61190825 G A 7 GENIC heterozygous 56915241 4 61191315 61191316 C CT 5 GENIC heterozygous 58915244 4 61191316 61191317 T - 5 GENIC heterozygous 56915247 4 61194221 61194225 ACAC ---- 14 GENIC heterozygous 58915246 4 61197513 61197514 A AT 5 GENIC heterozygous 58406831 4 61212436 61212437 C T 21 GENIC homozygous 56915346 4 61222858 61222859 G A 20 GENIC homozygous 56915349 4 61222870 61222871 T - 19 GENIC homozygous 56915350 4 61222875 61222876 G T 19 GENIC homozygous 56915351 4 61222883 61222884 G A 19 GENIC homozygous 56915352 4 61222903 61222904 T A 20 GENIC homozygous 56915353 4 61222909 61222910 T C 19 GENIC homozygous 56915354 4 61222916 61222917 A G 22 GENIC homozygous 58336379 4 61222918 61222919 T A 21 GENIC homozygous 58336380 4 61222977 61222978 T A 20 GENIC homozygous 56915355 4 61222981 61222982 G T 20 GENIC homozygous 56915356 4 61222982 61222983 T G 20 GENIC homozygous 58279849 4 61222985 61222986 G C 19 GENIC homozygous 56915357 4 61222995 61222996 A AT 19 GENIC homozygous 56915358 4 61225227 61225228 C T 10 GENIC homozygous 56915362 4 61225512 61225514 AA -- 7 GENIC heterozygous 58151193 4 61231522 61231526 ACAC ---- 6 GENIC homozygous 58723677 4 61232179 61232181 TG -- 8 GENIC heterozygous 56915372 4 61232882 61232883 A G 3 GENIC heterozygous 57733159 4 61232930 61232931 T G 8 GENIC homozygous 58279851 4 61235941 61235943 GG -- 23 GENIC homozygous 58336391 4 61235943 61235944 A ATTCT 23 GENIC homozygous 58336392 4 61235944 61235945 G GTT 23 GENIC homozygous 58336393 4 61235946 61235947 G C 22 GENIC homozygous 58336394 4 61235949 61235953 AGAC ---- 25 GENIC homozygous 58336395 4 61236137 61236138 T G 17 GENIC homozygous 57329737 4 61236138 61236139 G T 18 GENIC homozygous 57329739 4 61245988 61246051 ATCTCCTGCTTGCTGAATTAGCAAAGCTTCTTATTATTTTAAAAGAGAGAGAGACAGACAGAG --------------------------------------------------------------- 9 GENIC homozygous 58587535 4 61236149 61236150 C - 21 GENIC homozygous 56915387 4 61237152 61237153 C CT 8 GENIC heterozygous 58336396 4 61237188 61237189 C CTTCA 6 GENIC heterozygous 58336397 4 61237188 61237189 C CTTCTTCTTCTTCA 6 GENIC heterozygous 58336398 4 61237215 61237217 TC -- 3 GENIC heterozygous 58279853 4 61257908 61257909 G - 7 GENIC homozygous 57484303 4 61261367 61261369 TG -- 14 GENIC heterozygous 58336405 4 61253575 61253576 G GA 8 GENIC homozygous 58336404 4 61276008 61276009 A - 3 GENIC homozygous 58406835 4 61300693 61300695 TG -- 11 INTERGENIC homozygous 59236785 4 61302611 61302612 T TG 16 INTERGENIC homozygous 56915560 4 61303817 61303821 TGTG ---- 3 INTERGENIC homozygous 58443794 4 61308261 61308262 T G 19 INTERGENIC homozygous 56915574 4 61308268 61308269 C G 16 INTERGENIC homozygous 56915575 4 61308269 61308270 T G 16 INTERGENIC homozygous 56915576 4 61308271 61308272 A G 16 INTERGENIC homozygous 56915577 4 61308292 61308293 T G 15 INTERGENIC homozygous 56915578 4 61308310 61308311 A G 12 INTERGENIC homozygous 56915579 4 61308338 61308339 T A 14 INTERGENIC homozygous 56915580 4 61308352 61308353 A G 17 INTERGENIC homozygous 56915581 4 61308364 61308365 C - 19 INTERGENIC homozygous 56915582 4 61308383 61308384 T G 19 INTERGENIC homozygous 56915583 4 61308395 61308396 A G 18 INTERGENIC homozygous 56915584 4 61308444 61308445 C A 14 INTERGENIC homozygous 56915585 4 61308456 61308457 A G 11 INTERGENIC homozygous 56915586 4 61308461 61308462 A G 10 INTERGENIC homozygous 56915587 4 61308477 61308478 C G 9 INTERGENIC homozygous 57329763 4 61308478 61308479 C G 9 INTERGENIC homozygous 57329765 4 61308479 61308480 C G 8 INTERGENIC homozygous 57329767 4 61308484 61308485 C G 8 INTERGENIC homozygous 56915588 4 61308491 61308492 A G 9 INTERGENIC homozygous 56915589 4 61308493 61308494 A G 9 INTERGENIC homozygous 56915590 4 61308516 61308517 A G 9 INTERGENIC homozygous 56915591 4 61308518 61308519 A C 9 INTERGENIC homozygous 56915592 4 61315469 61315472 AGC --- 4 INTERGENIC homozygous 59236788 4 61321262 61321263 G - 3 INTERGENIC homozygous 56915656 4 61321270 61321271 A G 3 INTERGENIC homozygous 58336431 4 61321273 61321274 G - 4 INTERGENIC homozygous 56915658 4 61321278 61321279 T - 4 INTERGENIC homozygous 56915659 4 61321284 61321285 T A 5 INTERGENIC homozygous 58279875 4 61321286 61321287 A AG 5 INTERGENIC homozygous 56915660 4 61325353 61325354 C CTGTG 5 INTERGENIC heterozygous 57934043 4 61327057 61327059 AC -- 7 INTERGENIC heterozygous 58336435 4 61355651 61355652 T TC 14 INTERGENIC homozygous 56915760 4 61355661 61355663 TC -- 17 INTERGENIC homozygous 56915761 4 61355665 61355666 A AC 17 INTERGENIC homozygous 56915763 4 61355667 61355668 T TC 19 INTERGENIC homozygous 56915764 4 61355672 61355673 C - 19 INTERGENIC homozygous 56915765