chr	start	stop	reference nuc	variant nuc	depth	genic status	zygosity	variant ID
3	54361075	54361076	G	GA	12	INTERGENIC	heterozygous	58452420
3	54362288	54362289	A	AT	17	INTERGENIC	heterozygous	58452422
3	54365521	54365522	C	T	18	INTERGENIC	heterozygous	58452428
3	54366026	54366027	A	T	14	INTERGENIC	heterozygous	58452430
3	54366868	54366869	A	C	15	INTERGENIC	heterozygous	58452432
3	54368119	54368120	T	TAC	16	INTERGENIC	heterozygous	58452436
3	54373197	54373198	T	A	19	INTERGENIC	heterozygous	58452444
3	54373260	54373261	C	T	23	INTERGENIC	heterozygous	58452446
3	54374051	54374052	G	A	15	INTERGENIC	heterozygous	58452448
3	54374058	54374059	G	T	14	INTERGENIC	heterozygous	58452450
3	54376155	54376156	T	-	9	INTERGENIC	heterozygous	58452454
3	54377481	54377482	A	-	14	INTERGENIC	heterozygous	58452458
3	54377713	54377714	A	G	20	INTERGENIC	heterozygous	58452462
3	54378693	54378697	TCTG	----	14	INTERGENIC	heterozygous	58452466
3	54380896	54380897	T	-	14	INTERGENIC	heterozygous	58452468
3	54381352	54381353	C	-	13	INTERGENIC	heterozygous	58452472
3	54381822	54381823	T	A	19	INTERGENIC	heterozygous	58452474
3	54382465	54382466	C	T	12	INTERGENIC	heterozygous	58452475
3	54382851	54382852	A	T	24	INTERGENIC	heterozygous	58452479
3	54383241	54383242	G	A	17	INTERGENIC	heterozygous	58452481
3	54384555	54384556	A	C	21	INTERGENIC	heterozygous	58452483
3	54384707	54384708	G	A	13	INTERGENIC	heterozygous	58452485
3	54384956	54384957	T	C	16	INTERGENIC	heterozygous	58452487
3	54367460	54367461	A	AGTGTGTGTGT	8	INTERGENIC	homozygous	60428629
3	54412018	54412019	C	A	12	INTERGENIC	heterozygous	58452510
3	54412232	54412233	A	G	13	INTERGENIC	heterozygous	58452512
3	54412242	54412243	C	A	14	INTERGENIC	heterozygous	58452514
3	54412345	54412346	G	T	14	INTERGENIC	heterozygous	58452516
3	54412453	54412454	T	A	15	INTERGENIC	heterozygous	58452518
3	54412474	54412475	A	G	15	INTERGENIC	heterozygous	58452520
3	54412715	54412716	G	GT	12	INTERGENIC	heterozygous	58452522
3	54412884	54412885	T	TA	21	INTERGENIC	heterozygous	58452524
3	54412909	54412910	C	T	19	INTERGENIC	heterozygous	58452526
3	54415524	54415525	C	A	19	INTERGENIC	heterozygous	58452529
3	54416465	54416466	A	G	21	INTERGENIC	heterozygous	58452533
3	54416849	54416850	C	T	16	INTERGENIC	heterozygous	58452535
3	54417231	54417232	C	CT	12	INTERGENIC	homozygous	58452539
3	54417303	54417304	C	T	11	INTERGENIC	heterozygous	58452541
3	54417538	54417539	A	G	20	INTERGENIC	heterozygous	58452543
3	54417987	54417988	G	T	19	INTERGENIC	heterozygous	58452545
3	54418279	54418280	A	G	16	INTERGENIC	heterozygous	58452547
3	54418999	54419000	T	C	16	INTERGENIC	heterozygous	58452549
3	54419835	54419836	A	T	17	INTERGENIC	heterozygous	58452551
3	54420738	54420739	C	T	17	INTERGENIC	heterozygous	58452553
3	54433884	54433885	A	G	21	INTERGENIC	heterozygous	58452570
3	54434510	54434511	C	A	18	INTERGENIC	heterozygous	58452576
3	54436058	54436059	C	A	20	INTERGENIC	heterozygous	58452583
3	54436102	54436103	G	GA	10	INTERGENIC	homozygous	57376895
3	54436181	54436182	A	T	11	INTERGENIC	heterozygous	58452585
3	54436359	54436360	G	A	22	INTERGENIC	heterozygous	58452587
3	54436369	54436370	G	A	19	INTERGENIC	heterozygous	58452589
3	54436979	54436980	G	GT	19	INTERGENIC	homozygous	57376896
3	54437128	54437129	T	C	18	INTERGENIC	heterozygous	58452591
3	54437538	54437539	G	A	18	INTERGENIC	heterozygous	58452593
3	54441472	54441473	A	AT	7	INTERGENIC	homozygous	57376899
3	54441478	54441479	G	A	10	INTERGENIC	heterozygous	58452595
3	54443917	54443918	A	AT	13	INTERGENIC	heterozygous	58452601
3	54444061	54444062	T	C	12	INTERGENIC	heterozygous	58452603
3	54444062	54444063	T	C	12	INTERGENIC	heterozygous	58452605
3	54412720	54412721	G	T	14	INTERGENIC	heterozygous	59964333
3	54417232	54417233	C	CT	12	INTERGENIC	homozygous	58357271
3	54433547	54433548	G	C	11	INTERGENIC	heterozygous	58357275
3	54444608	54444609	A	G	21	INTERGENIC	heterozygous	58452607
3	54447017	54447018	T	C	11	INTERGENIC	heterozygous	58452615
3	54447298	54447299	G	T	14	INTERGENIC	heterozygous	58452617
3	54447601	54447602	G	T	15	INTERGENIC	heterozygous	58452619
3	54456328	54456329	G	A	8	INTERGENIC	heterozygous	58452623
3	54457053	54457054	G	A	13	INTERGENIC	heterozygous	58452625
3	54460353	54460354	G	A	18	INTERGENIC	heterozygous	58452638
3	54457082	54457083	T	C	14	INTERGENIC	heterozygous	58452627
3	54457680	54457681	T	C	20	INTERGENIC	heterozygous	58452629
3	54458866	54458867	A	T	13	INTERGENIC	homozygous	57376903
3	54459016	54459017	C	A	14	INTERGENIC	heterozygous	58452632
3	54459990	54459991	T	C	21	INTERGENIC	heterozygous	58452636
3	54460466	54460467	C	CA	20	INTERGENIC	homozygous	57376904
3	54460578	54460579	G	A	17	INTERGENIC	heterozygous	58452640
3	54460782	54460783	T	C	19	INTERGENIC	heterozygous	58452642
3	54460817	54460818	T	C	17	INTERGENIC	heterozygous	58452644
3	54461687	54461688	G	C	16	INTERGENIC	homozygous	58357283
3	54461987	54461988	A	C	12	INTERGENIC	heterozygous	58452646
3	54462225	54462226	A	G	10	INTERGENIC	heterozygous	58452648
3	54463478	54463479	C	CA	10	INTERGENIC	heterozygous	58452650
3	54464249	54464250	G	A	10	INTERGENIC	heterozygous	58452652
3	54465839	54465840	T	A	22	INTERGENIC	heterozygous	58452656
3	54466782	54466784	CA	--	12	INTERGENIC	heterozygous	58357285
3	54467570	54467571	A	T	10	INTERGENIC	heterozygous	58452658
3	54469058	54469059	C	CA	16	INTERGENIC	homozygous	57376905
3	54474700	54474701	T	C	8	INTERGENIC	heterozygous	58452660
3	54474774	54474775	G	A	8	INTERGENIC	heterozygous	58452662
3	54475061	54475062	A	G	19	INTERGENIC	homozygous	58357287
3	54475921	54475922	G	A	30	INTERGENIC	heterozygous	58452664
3	54476529	54476530	G	A	22	INTERGENIC	heterozygous	58452666
3	54476545	54476546	T	A	23	INTERGENIC	heterozygous	58452668
3	54477255	54477256	C	T	12	INTERGENIC	heterozygous	58452670
3	54478482	54478483	A	G	25	GENIC	heterozygous	58452672
3	54478615	54478616	T	C	12	GENIC	heterozygous	58452673
3	54479350	54479351	G	-	14	INTERGENIC	homozygous	57376910
3	54479794	54479795	G	T	12	INTERGENIC	heterozygous	58452677
3	54479869	54479870	G	GT	12	INTERGENIC	homozygous	57376911
3	54481164	54481165	A	AT	8	INTERGENIC	homozygous	57376912
3	54481178	54481179	G	T	7	INTERGENIC	homozygous	57376913
3	54487040	54487041	G	T	13	INTERGENIC	heterozygous	58452691
3	54488150	54488151	T	C	19	INTERGENIC	heterozygous	58452694
3	54488484	54488485	G	A	13	INTERGENIC	heterozygous	58452696
3	54489446	54489447	G	A	14	INTERGENIC	heterozygous	58452702
3	54489493	54489494	C	G	14	INTERGENIC	heterozygous	58452704
3	54489541	54489542	C	G	16	INTERGENIC	heterozygous	58452706
3	54489684	54489685	T	C	20	INTERGENIC	heterozygous	58452708
3	54490578	54490579	A	T	18	INTERGENIC	heterozygous	58452710
3	54490614	54490615	T	G	19	INTERGENIC	heterozygous	58452712
3	54491022	54491023	G	T	19	INTERGENIC	heterozygous	58452714
3	54491493	54491494	T	C	11	INTERGENIC	heterozygous	58452716
3	54491845	54491846	A	G	13	INTERGENIC	heterozygous	58452718
3	54493041	54493042	G	C	20	INTERGENIC	heterozygous	58452724
3	54493390	54493391	A	T	13	INTERGENIC	heterozygous	58452726
3	54493403	54493404	C	CT	13	INTERGENIC	heterozygous	58452728
3	54493780	54493781	A	T	16	INTERGENIC	heterozygous	58452734
3	54493907	54493908	A	T	13	INTERGENIC	heterozygous	58420509
3	54494264	54494265	C	T	13	INTERGENIC	heterozygous	58452736
3	54494266	54494267	T	C	13	INTERGENIC	heterozygous	58452738
3	54495171	54495172	T	C	16	INTERGENIC	heterozygous	58452740
3	54495447	54495448	T	A	12	INTERGENIC	homozygous	58357289
3	54495459	54495460	T	C	10	INTERGENIC	heterozygous	58452742
3	54495851	54495852	T	-	11	INTERGENIC	heterozygous	58452744
3	54496153	54496154	T	C	20	INTERGENIC	heterozygous	58452746
3	54499825	54499826	G	GGT	10	INTERGENIC	heterozygous	58452748
3	54507301	54507302	A	T	20	INTERGENIC	heterozygous	58452761
3	54508089	54508090	G	-	32	INTERGENIC	heterozygous	60428630
3	54508091	54508114	ATGTATGTATGTATGTATGTATG	-----------------------	44	INTERGENIC	heterozygous	60428631
3	54508097	54508098	G	T	33	INTERGENIC	heterozygous	58132719
3	54508117	54508118	G	T	31	INTERGENIC	heterozygous	60428632
3	54508121	54508122	G	T	29	INTERGENIC	heterozygous	60428633
3	54508334	54508335	C	G	33	INTERGENIC	heterozygous	58452762
3	54508444	54508445	A	G	33	INTERGENIC	heterozygous	57376924
3	54508589	54508592	AAG	---	36	INTERGENIC	heterozygous	58745335
3	54508613	54508614	T	C	36	INTERGENIC	heterozygous	57376925
3	54508622	54508623	G	A	37	INTERGENIC	heterozygous	58452764
3	54508668	54508669	A	T	32	INTERGENIC	heterozygous	58452766
3	54509087	54509088	C	CT	15	INTERGENIC	heterozygous	57376926
3	54528553	54528554	C	T	14	INTERGENIC	heterozygous	58452778
3	54528722	54528723	C	A	12	INTERGENIC	heterozygous	58452780
3	54529354	54529355	T	C	7	INTERGENIC	heterozygous	58452784
3	54529366	54529367	C	T	7	INTERGENIC	heterozygous	58452786
3	54529376	54529378	TA	--	7	INTERGENIC	heterozygous	58452788
3	54531105	54531106	C	T	19	INTERGENIC	heterozygous	58452794
3	54531386	54531387	A	AATATATATATAT	16	INTERGENIC	heterozygous	60428634
3	54531434	54531436	TA	--	13	INTERGENIC	heterozygous	58452796
3	54532464	54532465	A	T	18	INTERGENIC	heterozygous	58452798
3	54532832	54532833	G	A	21	INTERGENIC	possibly homozygous	58452800
3	54533371	54533372	T	A	14	INTERGENIC	heterozygous	58452802
3	54533915	54533916	G	A	8	INTERGENIC	heterozygous	60428635
3	54537945	54537946	C	T	18	INTERGENIC	heterozygous	58452804
3	54538058	54538062	AAAA	----	6	INTERGENIC	heterozygous	58452806
3	54555155	54555156	A	ATC	7	INTERGENIC	heterozygous	58745345
3	54555160	54555162	GA	--	7	INTERGENIC	heterozygous	58745347
3	54556211	54556212	T	C	18	INTERGENIC	homozygous	58452814
3	54556511	54556512	T	-	13	INTERGENIC	heterozygous	58452818
3	54556614	54556615	G	A	10	INTERGENIC	homozygous	58452820
3	54556854	54556855	A	C	17	INTERGENIC	heterozygous	58452824
3	54557055	54557056	A	AT	19	INTERGENIC	heterozygous	58452826
3	54557212	54557213	A	G	11	INTERGENIC	homozygous	57376930
3	54557219	54557220	C	T	11	INTERGENIC	homozygous	57376931
3	54557241	54557242	A	G	10	INTERGENIC	homozygous	57376932
3	54557254	54557255	G	C	8	INTERGENIC	heterozygous	58452828
3	54557286	54557287	A	G	8	INTERGENIC	homozygous	57376933
3	54558148	54558150	TG	--	27	INTERGENIC	heterozygous	58853524
3	54558279	54558280	A	G	29	INTERGENIC	heterozygous	60428636
3	54558291	54558292	C	T	28	INTERGENIC	heterozygous	60428637
3	54558492	54558493	T	G	21	INTERGENIC	heterozygous	58452832
3	54558719	54558720	T	C	28	INTERGENIC	heterozygous	58452834
3	54558733	54558734	T	-	14	INTERGENIC	heterozygous	58583064
3	54558742	54558743	T	A	14	INTERGENIC	heterozygous	57376934
3	54558764	54558765	C	G	9	INTERGENIC	homozygous	57376936
3	54558974	54558975	G	GTA	13	INTERGENIC	heterozygous	60428638
3	54561784	54561785	T	C	11	INTERGENIC	heterozygous	57376937
3	54561804	54561805	T	C	12	INTERGENIC	heterozygous	58452836
3	54561806	54561807	T	G	13	INTERGENIC	heterozygous	58452838
3	54561838	54561839	T	C	14	INTERGENIC	heterozygous	58452840
3	54562318	54562319	G	T	17	INTERGENIC	heterozygous	58452842
3	54562480	54562481	G	T	18	INTERGENIC	heterozygous	58452844
3	54563645	54563646	A	G	24	INTERGENIC	heterozygous	58452848
3	54563710	54563711	C	T	20	INTERGENIC	heterozygous	58452850
3	54564029	54564030	T	A	13	INTERGENIC	heterozygous	58452852
3	54565791	54565792	G	-	20	INTERGENIC	possibly homozygous	58452854
3	54566282	54566283	G	T	13	INTERGENIC	heterozygous	58452858
3	54576823	54576824	C	T	22	INTERGENIC	heterozygous	58452874
3	54568795	54568796	C	-	15	INTERGENIC	homozygous	57376939
3	54569397	54569398	T	C	8	INTERGENIC	heterozygous	58452864
3	54569913	54569914	C	G	14	INTERGENIC	heterozygous	58452868
3	54570316	54570317	C	-	16	INTERGENIC	heterozygous	59964340
3	54571197	54571198	C	G	19	INTERGENIC	heterozygous	58452870
3	54571438	54571439	T	G	13	INTERGENIC	heterozygous	58452872
3	54564270	54564271	T	C	28	INTERGENIC	heterozygous	60338430
3	54578751	54578752	G	T	14	INTERGENIC	heterozygous	58357293
3	54582692	54582693	A	AT	16	INTERGENIC	heterozygous	58452876
3	54583855	54583856	G	T	17	INTERGENIC	heterozygous	58452878
3	54584512	54584513	A	C	18	INTERGENIC	homozygous	58357297
3	54585057	54585058	C	T	14	INTERGENIC	heterozygous	58452880
3	54585074	54585075	C	T	12	INTERGENIC	heterozygous	58452882
3	54585548	54585549	T	-	19	INTERGENIC	heterozygous	58357299
3	54586410	54586411	A	G	26	INTERGENIC	heterozygous	58452884
3	54586687	54586688	T	C	18	INTERGENIC	heterozygous	58452886
3	54586796	54586797	A	C	21	INTERGENIC	heterozygous	58452888
3	54587359	54587360	T	C	11	INTERGENIC	homozygous	58357309
3	54587699	54587700	G	T	8	INTERGENIC	heterozygous	58357311
3	54587829	54587830	G	T	14	INTERGENIC	homozygous	58357313
3	54588075	54588076	A	T	15	INTERGENIC	homozygous	58357315
3	54588358	54588368	ACACACATAC	----------	7	INTERGENIC	homozygous	60428639
3	54588527	54588529	CA	--	11	INTERGENIC	heterozygous	57888425
3	54588680	54588681	A	-	12	INTERGENIC	homozygous	58357321
3	54589258	54589259	A	T	15	INTERGENIC	heterozygous	58357323
3	54589888	54589889	A	-	12	INTERGENIC	homozygous	58357325
3	54597586	54597587	T	C	6	INTERGENIC	heterozygous	58452899
3	54598414	54598415	T	C	12	INTERGENIC	heterozygous	60428640
3	54598818	54598819	C	T	15	INTERGENIC	heterozygous	60428645
3	54598415	54598416	G	A	12	INTERGENIC	heterozygous	60428641
3	54598432	54598433	G	A	7	INTERGENIC	heterozygous	60428642
3	54598433	54598434	G	C	7	INTERGENIC	heterozygous	60428643
3	54598552	54598553	T	C	12	INTERGENIC	heterozygous	60428644
3	54599229	54599232	TTT	---	14	INTERGENIC	heterozygous	60428646
3	54599977	54599978	C	T	7	INTERGENIC	homozygous	60428647
3	54603993	54603994	A	T	7	INTERGENIC	heterozygous	58357355
3	54605716	54605717	C	A	8	INTERGENIC	heterozygous	58452905
3	54605864	54605865	T	G	16	INTERGENIC	heterozygous	58357359
3	54605865	54605866	A	T	16	INTERGENIC	heterozygous	58544705
3	54606163	54606164	A	T	13	INTERGENIC	heterozygous	58357361
3	54606203	54606204	T	G	14	INTERGENIC	heterozygous	58357363
3	54606233	54606234	A	G	18	INTERGENIC	homozygous	58357365
3	54606477	54606478	G	A	11	INTERGENIC	homozygous	58357367
3	54606694	54606695	G	A	18	INTERGENIC	heterozygous	58452909
3	54606954	54606955	A	G	14	INTERGENIC	homozygous	58357371
3	54607283	54607284	T	-	15	INTERGENIC	homozygous	58357373
3	54607351	54607352	T	-	15	INTERGENIC	homozygous	58357375
3	54607489	54607490	A	G	15	INTERGENIC	heterozygous	58452917
3	54607771	54607772	A	ACTTAGTTT	17	INTERGENIC	homozygous	57376964
3	54608052	54608053	A	G	12	INTERGENIC	homozygous	58357377
3	54608286	54608287	G	A	22	INTERGENIC	homozygous	58357379
3	54609071	54609072	G	A	13	INTERGENIC	homozygous	58357383
3	54615403	54615404	T	A	13	INTERGENIC	homozygous	58357385
3	54616211	54616212	C	G	12	INTERGENIC	homozygous	58357387
3	54616293	54616294	C	G	14	INTERGENIC	heterozygous	58357389
3	54616651	54616652	T	A	7	INTERGENIC	homozygous	58357391
3	54616691	54616692	G	T	13	INTERGENIC	heterozygous	58506084
3	54616694	54616703	GAAAGCCTC	---------	13	INTERGENIC	heterozygous	58506086
3	54617835	54617836	A	G	23	INTERGENIC	heterozygous	58357393
3	54618292	54618293	T	C	15	INTERGENIC	homozygous	58357395
3	54618393	54618394	C	T	9	INTERGENIC	heterozygous	58745404
3	54618731	54618738	CCTAAGC	-------	15	INTERGENIC	heterozygous	58357397
3	54618786	54618787	C	T	22	INTERGENIC	heterozygous	58745406
3	54618942	54618943	C	T	8	INTERGENIC	heterozygous	58357399
3	54619433	54619434	C	G	10	INTERGENIC	heterozygous	58357401
3	54619439	54619440	C	T	9	INTERGENIC	heterozygous	58357403
3	54621729	54621730	G	A	16	INTERGENIC	homozygous	58357409
3	54621935	54621936	G	C	21	INTERGENIC	possibly homozygous	58745408
3	54622193	54622194	C	T	12	INTERGENIC	heterozygous	58745410
3	54622334	54622335	A	T	22	INTERGENIC	heterozygous	58745412
3	54622805	54622806	C	T	13	INTERGENIC	heterozygous	58745414
3	54624089	54624090	T	-	12	INTERGENIC	homozygous	58745418
3	54624279	54624280	A	G	17	INTERGENIC	heterozygous	58745422
3	54624792	54624793	G	A	15	INTERGENIC	heterozygous	58506104
3	54624819	54624825	AACAAA	------	17	INTERGENIC	heterozygous	58506106
3	54624939	54624940	A	T	18	INTERGENIC	heterozygous	58745424