chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 54372830 54372831 C - 8 INTERGENIC homozygous 60396148 3 54380011 54380012 C T 21 INTERGENIC heterozygous 60396149 3 54436102 54436103 G GA 20 INTERGENIC homozygous 57376895 3 54436979 54436980 G GT 18 INTERGENIC homozygous 57376896 3 54437560 54437561 A G 25 INTERGENIC heterozygous 60396150 3 54437575 54437576 A C 23 INTERGENIC heterozygous 60396151 3 54437578 54437579 C A 22 INTERGENIC heterozygous 60396152 3 54437584 54437585 C T 22 INTERGENIC heterozygous 60396153 3 54438118 54438119 G GA 19 INTERGENIC heterozygous 60396154 3 54441455 54441456 G A 7 INTERGENIC homozygous 57376897 3 54441460 54441461 G GA 5 INTERGENIC homozygous 57376898 3 54441461 54441462 C A 5 INTERGENIC homozygous 58583056 3 54441472 54441473 A AT 7 INTERGENIC homozygous 57376899 3 54458866 54458867 A T 28 INTERGENIC homozygous 57376903 3 54460466 54460467 C CA 10 INTERGENIC homozygous 57376904 3 54469058 54469059 C CA 22 INTERGENIC homozygous 57376905 3 54479350 54479351 G - 15 INTERGENIC homozygous 57376910 3 54479869 54479870 G GT 11 INTERGENIC homozygous 57376911 3 54487448 54487449 G - 12 INTERGENIC homozygous 57376917 3 54507956 54507962 TCTCTC ------ 39 INTERGENIC heterozygous 57376919 3 54508444 54508445 A G 71 INTERGENIC heterozygous 57376924 3 54508613 54508614 T C 73 INTERGENIC heterozygous 57376925 3 54509087 54509088 C CT 52 INTERGENIC heterozygous 57376926 3 54557212 54557213 A G 15 INTERGENIC homozygous 57376930 3 54557219 54557220 C T 17 INTERGENIC homozygous 57376931 3 54557241 54557242 A G 20 INTERGENIC homozygous 57376932 3 54557286 54557287 A G 22 INTERGENIC homozygous 57376933 3 54558254 54558255 T A 15 INTERGENIC heterozygous 60396155 3 54558742 54558743 T A 12 INTERGENIC heterozygous 57376934 3 54560248 54560249 G T 14 INTERGENIC heterozygous 60396156 3 54560665 54560666 T G 9 INTERGENIC heterozygous 60396157 3 54561784 54561785 T C 12 INTERGENIC heterozygous 57376937 3 54568795 54568796 C - 10 INTERGENIC homozygous 57376939 3 54607771 54607772 A ACTTAGTTT 13 INTERGENIC homozygous 57376964 3 54564270 54564271 T C 28 INTERGENIC heterozygous 60338430