chr	start	stop	reference nuc	variant nuc	depth	genic status	zygosity	variant ID
3	54361195	54361196	C	-	11	INTERGENIC	possibly homozygous	58745275
3	54363518	54363519	A	C	19	INTERGENIC	homozygous	58452424
3	54365521	54365522	C	T	3	INTERGENIC	homozygous	58452428
3	54366026	54366027	A	T	13	INTERGENIC	possibly homozygous	58452430
3	54368119	54368120	T	TAC	11	INTERGENIC	homozygous	58452436
3	54374051	54374052	G	A	5	INTERGENIC	heterozygous	58452448
3	54376155	54376156	T	-	10	INTERGENIC	homozygous	58452454
3	54376228	54376229	C	G	10	INTERGENIC	homozygous	58745277
3	54377064	54377076	GCCTTGAACCAT	------------	5	INTERGENIC	homozygous	58745279
3	54377481	54377482	A	-	10	INTERGENIC	homozygous	58452458
3	54378775	54378776	T	TC	3	INTERGENIC	heterozygous	58505934
3	54378775	54378776	T	TCC	3	INTERGENIC	heterozygous	58745281
3	54380896	54380897	T	-	3	INTERGENIC	homozygous	58452468
3	54381711	54381712	G	T	27	INTERGENIC	homozygous	58745283
3	54382183	54382184	C	T	13	INTERGENIC	homozygous	58745285
3	54382851	54382852	A	T	18	INTERGENIC	possibly homozygous	58452479
3	54384956	54384957	T	C	19	INTERGENIC	possibly homozygous	58452487
3	54404612	54404613	C	A	18	INTERGENIC	homozygous	58452505
3	54411977	54411978	C	A	8	INTERGENIC	possibly homozygous	58745289
3	54412232	54412233	A	G	6	INTERGENIC	homozygous	58452512
3	54412474	54412475	A	G	16	INTERGENIC	possibly homozygous	58452520
3	54412506	54412507	C	T	21	INTERGENIC	homozygous	60245343
3	54365863	54365864	T	C	12	INTERGENIC	homozygous	60245339
3	54384009	54384010	A	T	4	INTERGENIC	heterozygous	60245341
3	54413099	54413100	A	C	16	INTERGENIC	homozygous	58452527
3	54415945	54415948	CTT	---	6	INTERGENIC	homozygous	58745291
3	54419835	54419836	A	T	11	INTERGENIC	possibly homozygous	58452551
3	54420738	54420739	C	T	8	INTERGENIC	heterozygous	58452553
3	54420744	54420745	C	T	7	INTERGENIC	possibly homozygous	58745293
3	54421121	54421122	C	CT	3	INTERGENIC	heterozygous	58452555
3	54434123	54434124	T	A	4	INTERGENIC	homozygous	58452572
3	54434573	54434574	G	T	6	INTERGENIC	heterozygous	58745301
3	54434622	54434623	T	C	9	INTERGENIC	homozygous	58745303
3	54435225	54435226	T	G	16	INTERGENIC	homozygous	58452579
3	54435663	54435664	A	G	13	INTERGENIC	homozygous	58745305
3	54435832	54435833	A	C	9	INTERGENIC	possibly homozygous	58745307
3	54436040	54436041	A	G	9	INTERGENIC	homozygous	58745309
3	54436102	54436103	G	GA	12	INTERGENIC	homozygous	57376895
3	54437079	54437080	A	-	4	INTERGENIC	homozygous	58745311
3	54441472	54441473	A	AT	4	INTERGENIC	homozygous	57376899
3	54443097	54443098	T	C	19	INTERGENIC	homozygous	58745313
3	54443272	54443273	C	T	13	INTERGENIC	homozygous	58745315
3	54443835	54443836	C	T	16	INTERGENIC	homozygous	59606600
3	54444061	54444062	T	C	5	INTERGENIC	heterozygous	58452603
3	54444062	54444063	T	C	5	INTERGENIC	heterozygous	58452605
3	54444985	54444986	A	G	2	INTERGENIC	homozygous	58452609
3	54457082	54457083	T	C	3	INTERGENIC	heterozygous	58452627
3	54457222	54457223	T	C	8	INTERGENIC	homozygous	58745317
3	54457606	54457607	G	A	8	INTERGENIC	homozygous	58745319
3	54458866	54458867	A	T	6	INTERGENIC	homozygous	57376903
3	54460466	54460467	C	CA	15	INTERGENIC	homozygous	57376904
3	54460757	54460758	G	T	6	INTERGENIC	homozygous	58745321
3	54461987	54461988	A	C	3	INTERGENIC	heterozygous	58452646
3	54463062	54463063	G	A	6	INTERGENIC	homozygous	58745323
3	54464653	54464654	C	T	12	INTERGENIC	homozygous	58745325
3	54467570	54467571	A	T	14	INTERGENIC	homozygous	58452658
3	54467852	54467853	T	C	15	INTERGENIC	homozygous	60245345
3	54469058	54469059	C	CA	15	INTERGENIC	possibly homozygous	57376905
3	54469896	54469897	C	T	12	INTERGENIC	homozygous	60245347
3	54471344	54471345	T	G	15	INTERGENIC	homozygous	60245349
3	54471403	54471404	A	AG	3	INTERGENIC	homozygous	57376906
3	54474859	54474860	A	T	22	INTERGENIC	homozygous	60245353
3	54474892	54474893	C	T	22	INTERGENIC	homozygous	59683125
3	54475061	54475062	A	G	25	INTERGENIC	homozygous	58357287
3	54475617	54475618	C	T	7	INTERGENIC	homozygous	60245355
3	54479350	54479351	G	-	5	INTERGENIC	homozygous	57376910
3	54486572	54486573	T	C	6	INTERGENIC	heterozygous	58452687
3	54486818	54486819	C	T	15	INTERGENIC	possibly homozygous	60245359
3	54489052	54489053	T	C	7	INTERGENIC	homozygous	60245361
3	54489684	54489685	T	C	1	INTERGENIC	homozygous	58452708
3	54490700	54490701	T	-	3	INTERGENIC	heterozygous	58745333
3	54456691	54456692	G	GA	1	INTERGENIC	homozygous	59165260
3	54493780	54493781	A	T	10	INTERGENIC	possibly homozygous	58452734
3	54494266	54494267	T	C	3	INTERGENIC	homozygous	58452738
3	54495447	54495448	T	A	14	INTERGENIC	homozygous	58357289
3	54495459	54495460	T	C	9	INTERGENIC	possibly homozygous	58452742
3	54495683	54495684	G	T	15	INTERGENIC	possibly homozygous	60245365
3	54495851	54495852	T	-	2	INTERGENIC	homozygous	58452744
3	54496153	54496154	T	C	2	INTERGENIC	heterozygous	58452746
3	54496841	54496842	T	-	13	INTERGENIC	heterozygous	59683151
3	54498720	54498721	C	G	6	INTERGENIC	homozygous	60245367
3	54508444	54508445	A	G	10	INTERGENIC	possibly homozygous	57376924
3	54528553	54528554	C	T	7	INTERGENIC	homozygous	58452778
3	54529835	54529836	A	C	8	INTERGENIC	possibly homozygous	60245369
3	54530389	54530390	G	A	12	INTERGENIC	homozygous	60245371
3	54538858	54538859	T	A	2	INTERGENIC	homozygous	58505997
3	54555528	54555529	G	-	5	INTERGENIC	homozygous	60245375
3	54555657	54555658	T	A	9	INTERGENIC	homozygous	60245377
3	54556631	54556632	T	-	3	INTERGENIC	heterozygous	57888421
3	54557434	54557435	C	T	5	INTERGENIC	homozygous	58506005
3	54562480	54562481	G	T	4	INTERGENIC	heterozygous	58452844
3	54562976	54562977	T	-	8	INTERGENIC	homozygous	58506012
3	54565122	54565140	CAAGAAAAAGGAAGACCA	------------------	1	INTERGENIC	homozygous	58506014
3	54565793	54565794	T	-	5	INTERGENIC	homozygous	58452856
3	54568552	54568553	T	C	3	INTERGENIC	heterozygous	58506018
3	54568795	54568796	C	-	5	INTERGENIC	homozygous	57376939
3	54568860	54568861	G	A	8	INTERGENIC	homozygous	58506020
3	54569094	54569098	TTTT	----	4	INTERGENIC	homozygous	58804232
3	54569830	54569831	T	C	1	INTERGENIC	homozygous	58506025
3	54576167	54576168	G	T	20	INTERGENIC	possibly homozygous	58506039
3	54576553	54576554	A	AT	3	INTERGENIC	homozygous	58506045
3	54576959	54576960	C	G	6	INTERGENIC	heterozygous	58506050
3	54577509	54577510	G	T	18	INTERGENIC	homozygous	58506052
3	54578392	54578393	T	G	14	INTERGENIC	homozygous	58506056
3	54578720	54578721	G	T	26	INTERGENIC	homozygous	60245393
3	54578412	54578413	G	C	12	INTERGENIC	homozygous	58506058
3	54578628	54578629	G	A	14	INTERGENIC	homozygous	58506060
3	54559821	54559822	T	-	14	INTERGENIC	heterozygous	60268513
3	54575997	54575998	A	G	3	INTERGENIC	homozygous	60245383
3	54576506	54576507	T	C	5	INTERGENIC	homozygous	60245385
3	54576688	54576689	A	G	12	INTERGENIC	possibly homozygous	60245387
3	54576968	54576969	C	T	4	INTERGENIC	heterozygous	60245389
3	54577197	54577198	A	C	7	INTERGENIC	homozygous	60245391
3	54580821	54580822	A	G	9	INTERGENIC	possibly homozygous	58506066
3	54581277	54581278	T	-	8	INTERGENIC	homozygous	58506068
3	54581465	54581467	AT	--	7	INTERGENIC	heterozygous	58506070
3	54582211	54582212	T	TGA	1	INTERGENIC	homozygous	58804238
3	54582682	54582688	GTCATA	------	1	INTERGENIC	homozygous	60245395
3	54584225	54584226	T	G	13	INTERGENIC	possibly homozygous	60245397
3	54584512	54584513	A	C	3	INTERGENIC	homozygous	58357297
3	54586667	54586668	T	C	4	INTERGENIC	homozygous	58357301
3	54586687	54586688	T	C	2	INTERGENIC	homozygous	58452886
3	54586967	54586968	T	-	8	INTERGENIC	homozygous	58544703
3	54587359	54587360	T	C	8	INTERGENIC	homozygous	58357309
3	54587812	54587813	G	C	17	INTERGENIC	possibly homozygous	60245399
3	54588075	54588076	A	T	9	INTERGENIC	homozygous	58357315
3	54588365	54588366	T	C	4	INTERGENIC	heterozygous	58946225
3	54588577	54588578	A	AACACAC	2	INTERGENIC	homozygous	59683223
3	54588680	54588681	A	-	12	INTERGENIC	possibly homozygous	58357321
3	54590032	54590033	T	A	4	INTERGENIC	heterozygous	58357327
3	54590131	54590132	G	-	7	INTERGENIC	homozygous	58745390
3	54590407	54590408	A	G	23	INTERGENIC	homozygous	60245401
3	54592232	54592233	C	A	8	INTERGENIC	possibly homozygous	60245403
3	54597007	54597008	A	AT	3	INTERGENIC	heterozygous	58357343
3	54606233	54606234	A	G	7	INTERGENIC	homozygous	58357365
3	54606477	54606478	G	A	13	INTERGENIC	homozygous	58357367
3	54606906	54606907	A	G	9	INTERGENIC	homozygous	60245409
3	54607118	54607119	A	C	20	INTERGENIC	homozygous	60245411
3	54607143	54607144	C	G	23	INTERGENIC	possibly homozygous	58452913
3	54607251	54607252	A	G	5	INTERGENIC	homozygous	60245413
3	54607283	54607284	T	-	20	INTERGENIC	homozygous	58357373
3	54607351	54607352	T	-	4	INTERGENIC	homozygous	58357375
3	54607393	54607394	G	-	10	INTERGENIC	homozygous	58452915
3	54608052	54608053	A	G	14	INTERGENIC	homozygous	58357377
3	54608286	54608287	G	A	3	INTERGENIC	homozygous	58357379
3	54608308	54608309	T	C	6	INTERGENIC	homozygous	58452919
3	54608588	54608589	T	C	12	INTERGENIC	possibly homozygous	58357381
3	54616211	54616212	C	G	12	INTERGENIC	homozygous	58357387
3	54618292	54618293	T	C	9	INTERGENIC	possibly homozygous	58357395
3	54618731	54618738	CCTAAGC	-------	1	INTERGENIC	homozygous	58357397
3	54621729	54621730	G	A	9	INTERGENIC	homozygous	58357409
3	54588062	54588063	A	T	9	INTERGENIC	homozygous	59372774