chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 82549145 82549146 G A 11 GENIC homozygous 57912274 3 82549255 82549256 C T 9 GENIC homozygous 57912275 3 82549291 82549292 G A 10 GENIC homozygous 57912276 3 82549333 82549334 G A 6 GENIC homozygous 57912277 3 82549599 82549600 C T 8 GENIC homozygous 57912278 3 82549692 82549693 A G 5 GENIC homozygous 57912279 3 82549703 82549704 G A 6 GENIC homozygous 57912280 3 82550133 82550134 C T 7 INTERGENIC homozygous 57912281 3 82550179 82550180 A G 4 INTERGENIC homozygous 57912282 3 82550288 82550289 G A 10 INTERGENIC homozygous 57912283 3 82550470 82550471 T C 7 INTERGENIC homozygous 57912284 3 82550522 82550523 A G 7 INTERGENIC homozygous 57912285 3 82550840 82550841 T C 5 INTERGENIC homozygous 57912286 3 82550855 82550856 A C 7 INTERGENIC homozygous 57912287 3 82551146 82551147 A C 5 INTERGENIC homozygous 57912288 3 82551359 82551360 G A 7 INTERGENIC homozygous 58160323 3 82551428 82551429 C G 5 INTERGENIC homozygous 57912290 3 82551460 82551461 A T 3 INTERGENIC homozygous 57912291 3 82551474 82551475 C T 3 INTERGENIC homozygous 57912292 3 82551503 82551504 T C 7 INTERGENIC homozygous 57912293 3 82551545 82551546 G A 11 INTERGENIC homozygous 58467534 3 82555270 82555271 A C 2 INTERGENIC heterozygous 58949556 3 82558420 82558421 T G 2 INTERGENIC homozygous 57912297 3 82558540 82558541 A G 12 INTERGENIC homozygous 57499753 3 82558771 82558772 G A 7 INTERGENIC homozygous 57912298 3 82558804 82558805 C G 3 INTERGENIC homozygous 57499755 3 82558836 82558837 A T 3 INTERGENIC homozygous 57499757 3 82559070 82559071 T C 3 INTERGENIC homozygous 57912299 3 82559382 82559383 T C 19 INTERGENIC homozygous 57912300 3 82559772 82559773 T C 19 INTERGENIC homozygous 57912301 3 82559782 82559783 G T 22 INTERGENIC homozygous 57912302 3 82559810 82559811 A C 20 INTERGENIC homozygous 57912303 3 82559933 82559934 G C 7 INTERGENIC homozygous 57912304 3 82559974 82559975 A T 9 INTERGENIC homozygous 57912305 3 82560106 82560107 A G 11 INTERGENIC homozygous 57912306 3 82560122 82560123 A G 14 INTERGENIC homozygous 57912307 3 82560435 82560436 A T 5 INTERGENIC homozygous 57912308 3 82560810 82560814 TGTA ---- 4 INTERGENIC homozygous 57912309 3 82560966 82560967 C T 11 INTERGENIC homozygous 57912310 3 82561018 82561019 G C 5 INTERGENIC homozygous 57912311 3 82561293 82561294 G A 7 INTERGENIC homozygous 57912312 3 82561312 82561313 T G 6 INTERGENIC homozygous 57912313 3 82561433 82561434 A C 3 INTERGENIC homozygous 57912315 3 82561441 82561442 C G 4 INTERGENIC homozygous 57912316 3 82561487 82561488 G A 11 INTERGENIC homozygous 57912317 3 82561543 82561544 A G 8 INTERGENIC homozygous 57912318 3 82561566 82561568 TA -- 6 INTERGENIC homozygous 57912319 3 82561692 82561693 T C 4 INTERGENIC homozygous 57912320 3 82561852 82561853 T C 4 INTERGENIC homozygous 57912321 3 82561858 82561859 G A 5 INTERGENIC homozygous 57912322 3 82561919 82561920 A T 5 INTERGENIC homozygous 57912323 3 82561937 82561938 T A 10 INTERGENIC homozygous 57912324 3 82562184 82562185 T G 8 INTERGENIC homozygous 58467536 3 82562252 82562253 G A 13 INTERGENIC homozygous 57912327 3 82562374 82562375 C A 6 INTERGENIC homozygous 57912328 3 82562398 82562399 A G 12 INTERGENIC homozygous 57912329 3 82562502 82562503 A G 33 INTERGENIC homozygous 57912330 3 82562668 82562669 C A 21 INTERGENIC homozygous 57912331 3 82563005 82563006 A G 7 INTERGENIC homozygous 57912333 3 82563215 82563216 A T 7 GENIC homozygous 57912334 3 82563269 82563270 G A 4 GENIC homozygous 57912335 3 82563582 82563583 A G 11 GENIC homozygous 57499769 3 82564066 82564067 C CAAA 8 INTERGENIC possibly homozygous 57912337 3 82564074 82564076 AC -- 12 INTERGENIC heterozygous 58599539 3 82564125 82564129 GTTT ---- 10 INTERGENIC heterozygous 58599541 3 82564160 82564161 T C 8 INTERGENIC heterozygous 57912338 3 82564433 82564434 C T 22 INTERGENIC homozygous 57912343 3 82564458 82564459 T G 22 INTERGENIC homozygous 57499771 3 82564498 82564499 A G 16 INTERGENIC homozygous 57912344 3 82564526 82564527 A G 15 INTERGENIC homozygous 57912345 3 82564634 82564635 A C 23 INTERGENIC homozygous 57912347 3 82564693 82564694 G T 16 INTERGENIC homozygous 57912348 3 82564744 82564745 C G 7 INTERGENIC homozygous 57912349 3 82565272 82565273 G A 6 INTERGENIC homozygous 57912356 3 82565355 82565356 C T 7 INTERGENIC possibly homozygous 57912357 3 82565458 82565459 C G 3 INTERGENIC homozygous 57912359 3 82565498 82565499 A G 2 INTERGENIC homozygous 57912360 3 82565547 82565548 C T 2 INTERGENIC homozygous 57912361 3 82565804 82565805 C T 4 INTERGENIC homozygous 57912362 3 82566092 82566093 A G 13 INTERGENIC homozygous 57912363 3 82566180 82566181 T G 4 INTERGENIC homozygous 57912364 3 82566209 82566210 T C 5 INTERGENIC homozygous 57912365 3 82566245 82566246 T C 9 INTERGENIC possibly homozygous 57912366 3 82566434 82566435 T C 13 INTERGENIC homozygous 57912367 3 82566565 82566566 A G 9 INTERGENIC homozygous 57912368 3 82566621 82566625 AAAC ---- 8 INTERGENIC possibly homozygous 57912369 3 82566737 82566738 C T 16 INTERGENIC homozygous 57912370 3 82566889 82566890 T G 3 INTERGENIC homozygous 57912371 3 82566902 82566904 AT -- 4 INTERGENIC homozygous 58467538 3 82566994 82566995 T C 13 INTERGENIC homozygous 57912373 3 82567019 82567020 C - 13 INTERGENIC homozygous 57912374 3 82567124 82567125 T - 9 INTERGENIC homozygous 57912375 3 82567132 82567133 A G 11 INTERGENIC homozygous 57912376 3 82567346 82567347 A C 9 INTERGENIC homozygous 57912377 3 82567366 82567367 G A 7 INTERGENIC homozygous 57912378 3 82567457 82567458 C CA 6 INTERGENIC homozygous 57912379 3 82567472 82567473 T G 9 INTERGENIC homozygous 57912380 3 82567631 82567632 A T 10 INTERGENIC heterozygous 57912382 3 82567660 82567661 T A 8 INTERGENIC heterozygous 57912383 3 82567682 82567683 C CA 7 INTERGENIC possibly homozygous 57912384 3 82567816 82567817 G C 6 INTERGENIC homozygous 57912385 3 82567921 82567922 A G 10 INTERGENIC homozygous 57912386 3 82567922 82567923 C T 9 INTERGENIC homozygous 57912387 3 82567972 82567973 T C 4 INTERGENIC homozygous 57912388 3 82567978 82567979 C T 4 INTERGENIC homozygous 57912389 3 82568055 82568056 A C 14 INTERGENIC homozygous 57912390 3 82568126 82568127 C A 25 INTERGENIC homozygous 57912391 3 82568156 82568157 T C 20 INTERGENIC homozygous 57912392 3 82568171 82568172 A G 17 INTERGENIC homozygous 57912393 3 82568772 82568773 A G 8 INTERGENIC homozygous 57912397 3 82568868 82568869 C T 9 INTERGENIC homozygous 57912398 3 82568873 82568874 G C 10 INTERGENIC homozygous 57912399 3 82568974 82568975 G A 4 INTERGENIC homozygous 57912400 3 82568995 82568996 C G 5 INTERGENIC homozygous 57912401 3 82569316 82569317 T G 14 INTERGENIC homozygous 57912404 3 82569440 82569441 A T 9 INTERGENIC homozygous 57912405 3 82569443 82569444 C T 11 INTERGENIC homozygous 57912406 3 82569462 82569463 A G 12 INTERGENIC homozygous 57912407 3 82569886 82569887 T C 13 INTERGENIC homozygous 57912410 3 82569930 82569931 G T 8 INTERGENIC homozygous 57912411 3 82570193 82570194 T C 10 INTERGENIC homozygous 57912416 3 82570198 82570199 G A 10 INTERGENIC homozygous 57912417 3 82570255 82570256 T C 8 INTERGENIC homozygous 57912418 3 82570276 82570277 A C 10 INTERGENIC homozygous 57912419 3 82570316 82570317 T C 13 INTERGENIC homozygous 57499799 3 82570423 82570424 G A 12 INTERGENIC homozygous 57499801 3 82570463 82570464 C G 9 INTERGENIC homozygous 57912421 3 82570448 82570449 C A 9 INTERGENIC possibly homozygous 57912420 3 82570451 82570452 T G 8 INTERGENIC homozygous 57499803 3 82561985 82562058 TCTCACCTTTTGATTAGAAATTTATTCATTAGTTTTTCTTTTAACCATTATCCTATGAATTATTATCATTAAA ------------------------------------------------------------------------- 7 INTERGENIC homozygous 59102444 3 82567120 82567121 A T 13 INTERGENIC homozygous 58750905 3 82568979 82568980 T TTA 4 INTERGENIC homozygous 58901365 3 82568983 82568985 AT -- 4 INTERGENIC homozygous 58901367 3 82570518 82570519 A G 10 INTERGENIC homozygous 57912422 3 82570530 82570531 C T 11 INTERGENIC homozygous 57912423 3 82570559 82570560 C G 13 INTERGENIC homozygous 57912424 3 82570609 82570610 C T 10 INTERGENIC homozygous 57912425 3 82570647 82570648 T C 11 INTERGENIC homozygous 57912426 3 82570757 82570758 C G 24 INTERGENIC possibly homozygous 57912427 3 82570789 82570790 G A 29 INTERGENIC homozygous 57912428 3 82570872 82570873 A - 19 INTERGENIC homozygous 57912429 3 82570902 82570904 AT -- 14 INTERGENIC homozygous 59965492 3 82570934 82570935 G A 15 INTERGENIC homozygous 57499805 3 82571049 82571050 G A 17 INTERGENIC homozygous 57912432 3 82571050 82571051 C T 17 INTERGENIC homozygous 57912433 3 82571059 82571060 C - 15 INTERGENIC homozygous 57912434 3 82571292 82571293 A AAAAAC 6 INTERGENIC homozygous 57912435 3 82571381 82571382 C A 8 INTERGENIC homozygous 57912436 3 82571429 82571430 A G 15 INTERGENIC homozygous 57912437 3 82571613 82571614 G GAA 2 INTERGENIC heterozygous 59102451 3 82571615 82571616 T TTCAAGACA 2 INTERGENIC heterozygous 59102454 3 82571617 82571618 T TGAGGAAAGAA 2 INTERGENIC heterozygous 59102456 3 82571654 82571655 G A 3 INTERGENIC homozygous 57912439 3 82571737 82571738 G A 7 INTERGENIC homozygous 57912440 3 82571797 82571798 A - 12 INTERGENIC homozygous 57912441 3 82571884 82571885 C G 10 INTERGENIC homozygous 57912442 3 82572013 82572014 A T 12 INTERGENIC homozygous 57912443 3 82572424 82572425 C T 10 INTERGENIC homozygous 57912444 3 82572510 82572511 T - 7 INTERGENIC homozygous 57912445 3 82572593 82572594 G T 15 INTERGENIC possibly homozygous 57912446 3 82572730 82572731 T TA 14 INTERGENIC homozygous 57912448 3 82572762 82572763 A G 14 INTERGENIC homozygous 57499809 3 82572820 82572821 G T 13 INTERGENIC homozygous 57912449 3 82572878 82572879 C A 23 INTERGENIC homozygous 57912450 3 82572965 82572966 T A 11 INTERGENIC homozygous 57912451 3 82573109 82573110 T C 9 INTERGENIC homozygous 57912452 3 82573162 82573163 C T 8 INTERGENIC homozygous 57912453 3 82573260 82573261 G A 7 INTERGENIC homozygous 57912454 3 82573353 82573354 A G 6 INTERGENIC homozygous 57912455 3 82573425 82573426 G A 9 INTERGENIC homozygous 57912456 3 82573430 82573431 C T 8 INTERGENIC homozygous 57912457 3 82573521 82573522 A G 14 INTERGENIC homozygous 57499811 3 82573662 82573663 G A 5 INTERGENIC homozygous 57912458 3 82573757 82573758 C T 6 INTERGENIC homozygous 57499813 3 82574058 82574059 A T 10 INTERGENIC homozygous 57912459 3 82574238 82574239 G A 12 INTERGENIC homozygous 57912460 3 82574598 82574599 G C 9 INTERGENIC homozygous 57912461 3 82574824 82574831 CCCCCAC ------- 7 INTERGENIC homozygous 57499815 3 82575315 82575316 C T 11 INTERGENIC homozygous 57912465 3 82574964 82574965 C T 15 INTERGENIC homozygous 57912462 3 82575069 82575070 G A 11 INTERGENIC homozygous 57912463 3 82575307 82575311 TGCC ---- 10 INTERGENIC homozygous 57912464 3 82575347 82575348 T C 14 INTERGENIC homozygous 57912466 3 82575408 82575409 G A 14 INTERGENIC homozygous 57912467 3 82575409 82575410 G GCCTCC 14 INTERGENIC homozygous 57912468 3 82575419 82575420 G A 16 INTERGENIC homozygous 57912469 3 82575455 82575456 G A 19 INTERGENIC possibly homozygous 57912470 3 82575607 82575608 T - 15 INTERGENIC homozygous 57499817 3 82575609 82575612 ATC --- 15 INTERGENIC homozygous 57499819 3 82575803 82575804 T C 6 INTERGENIC homozygous 57912471 3 82575911 82575912 G A 14 INTERGENIC homozygous 57912472 3 82575987 82575988 A G 9 INTERGENIC homozygous 57912473 3 82576037 82576038 G C 14 INTERGENIC homozygous 57912474 3 82576051 82576052 G C 16 INTERGENIC homozygous 57912475 3 82576249 82576250 C G 9 INTERGENIC homozygous 57912476 3 82576446 82576447 A G 14 INTERGENIC homozygous 57912477 3 82576454 82576455 T C 16 INTERGENIC homozygous 57912478 3 82576499 82576500 A G 19 INTERGENIC homozygous 57912479 3 82576555 82576556 T A 15 INTERGENIC homozygous 57912480 3 82576671 82576672 T C 14 INTERGENIC homozygous 57912481 3 82576737 82576738 G C 29 INTERGENIC homozygous 57912482 3 82576740 82576741 C G 31 INTERGENIC homozygous 57912483 3 82576784 82576785 C CAGCGGTG 24 INTERGENIC possibly homozygous 59965494 3 82577002 82577003 T C 17 INTERGENIC homozygous 57912486 3 82577264 82577265 A C 13 INTERGENIC homozygous 57912487 3 82577378 82577379 C A 8 INTERGENIC homozygous 57912488 3 82577597 82577598 T C 4 INTERGENIC homozygous 59965496 3 82577599 82577600 T C 4 INTERGENIC homozygous 59965498 3 82577604 82577624 ATATATATATATATATATAT -------------------- 7 INTERGENIC homozygous 59965500 3 82577635 82577636 T TGG 7 INTERGENIC homozygous 59102461 3 82577646 82577647 A T 5 INTERGENIC homozygous 57912489 3 82578136 82578137 C T 13 INTERGENIC homozygous 57912490 3 82578192 82578193 A G 16 INTERGENIC homozygous 57499821 3 82578217 82578218 C A 15 INTERGENIC homozygous 57912491 3 82578343 82578344 G C 15 INTERGENIC homozygous 57499823 3 82578393 82578394 T A 17 INTERGENIC homozygous 58467540 3 82578551 82578552 T C 24 INTERGENIC homozygous 57912492 3 82578562 82578563 A T 22 INTERGENIC homozygous 57912493 3 82579394 82579395 C A 5 INTERGENIC homozygous 58467542 3 82579622 82579623 A G 9 INTERGENIC homozygous 57912496 3 82579697 82579698 C T 18 INTERGENIC homozygous 57912497 3 82579771 82579772 T A 14 INTERGENIC homozygous 57912498 3 82579842 82579843 T C 12 INTERGENIC homozygous 57499827 3 82579845 82579846 T TA 12 INTERGENIC homozygous 57912499 3 82580086 82580087 C T 15 INTERGENIC homozygous 57912500 3 82580359 82580360 T G 29 INTERGENIC homozygous 57912501 3 82580859 82580860 G T 4 INTERGENIC homozygous 58599549 3 82580862 82580863 T G 4 INTERGENIC homozygous 58750915 3 82581131 82581132 T C 17 INTERGENIC homozygous 57912502 3 82581415 82581416 A G 16 INTERGENIC homozygous 57912503 3 82581436 82581437 T G 13 INTERGENIC homozygous 57912504 3 82581791 82581792 G GT 10 INTERGENIC possibly homozygous 57912506 3 82583283 82583284 C T 5 INTERGENIC homozygous 57912508 3 82583548 82583549 C T 20 INTERGENIC homozygous 57912509 3 82583588 82583589 A AG 14 INTERGENIC homozygous 57912510 3 82583947 82583948 A AATG 17 INTERGENIC homozygous 57912511 3 82584100 82584101 T - 10 INTERGENIC homozygous 57912512 3 82582828 82582829 T TA 3 INTERGENIC homozygous 59517018