chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 176586039 176586040 C T 31 INTERGENIC homozygous 57811694 3 176586163 176586164 G A 22 INTERGENIC homozygous 57811696 3 176586193 176586194 A G 20 INTERGENIC homozygous 57811698 3 176586247 176586248 G T 19 INTERGENIC homozygous 57811700 3 176586281 176586282 G T 19 INTERGENIC homozygous 57811702 3 176586445 176586446 A G 10 INTERGENIC homozygous 57811704 3 176586593 176586599 ACACAA ------ 5 INTERGENIC homozygous 57811706 3 176586775 176586776 T G 12 INTERGENIC homozygous 57811710 3 176587128 176587129 C T 21 INTERGENIC possibly homozygous 57811712 3 176587244 176587245 A T 21 INTERGENIC possibly homozygous 57811716 3 176587255 176587256 A T 23 INTERGENIC possibly homozygous 57811718 3 176587406 176587407 A G 14 INTERGENIC homozygous 57811720 3 176587470 176587471 T C 19 INTERGENIC homozygous 57811722 3 176590013 176590014 A G 16 INTERGENIC possibly homozygous 57811726 3 176590132 176590133 T C 12 INTERGENIC homozygous 57811728 3 176590283 176590284 T A 8 INTERGENIC homozygous 57811732 3 176590368 176590369 T G 11 INTERGENIC homozygous 57811734 3 176590647 176590648 A G 15 INTERGENIC homozygous 57811736 3 176590754 176590755 A C 16 INTERGENIC possibly homozygous 57811738 3 176590769 176590824 TGTAGTCTGCCTGTAGTCTGCCTGTAGTCCTCCTGTAGTCCTTCTGTAGTCTACG ------------------------------------------------------- 17 INTERGENIC possibly homozygous 58565767 3 176590931 176590932 C T 27 INTERGENIC possibly homozygous 58253967 3 176591371 176591372 A G 27 INTERGENIC possibly homozygous 57811754 3 176591790 176591791 G C 11 INTERGENIC homozygous 57811756 3 176591791 176591792 T C 11 INTERGENIC homozygous 57811758 3 176591923 176591925 CA -- 1 INTERGENIC homozygous 58699872 3 176591960 176591966 ACCAAC ------ 4 INTERGENIC homozygous 57811762 3 176593024 176593025 T A 14 INTERGENIC homozygous 57811766 3 176593182 176593188 TGTGTG ------ 22 INTERGENIC homozygous 57811768 3 176593256 176593257 C T 38 INTERGENIC homozygous 58253968 3 176593263 176593269 GTGTAA ------ 44 INTERGENIC homozygous 57811770 3 176593352 176593353 G GT 48 INTERGENIC homozygous 57811772 3 176593353 176593354 G GT 48 INTERGENIC homozygous 57811776 3 176593418 176593419 A G 47 INTERGENIC homozygous 57811778 3 176593494 176593495 T C 42 INTERGENIC homozygous 57811780 3 176593495 176593496 G A 41 INTERGENIC homozygous 57811782 3 176593694 176593695 T TACACACACACAC 25 INTERGENIC homozygous 58565768 3 176593744 176593745 C G 29 INTERGENIC possibly homozygous 57811788 3 176593943 176593944 A AG 10 INTERGENIC heterozygous 58253969 3 176593946 176593947 A AAG 16 INTERGENIC possibly homozygous 57811790 3 176593978 176593979 A G 12 INTERGENIC homozygous 57811792 3 176594027 176594029 GA -- 11 INTERGENIC heterozygous 58443930 3 176594438 176594439 T C 13 INTERGENIC homozygous 57811796 3 176594460 176594461 A ACCTTGGCACATGGATGCAAGG 14 INTERGENIC homozygous 57811798 3 176594563 176594564 A C 17 INTERGENIC homozygous 57811800 3 176594905 176594906 A G 13 INTERGENIC homozygous 58253970 3 176594956 176594957 C T 8 INTERGENIC heterozygous 57811804 3 176595057 176595058 G GTC 10 INTERGENIC homozygous 57811812 3 176595164 176595180 TCTCTCTCTCTCTCTG ---------------- 5 INTERGENIC heterozygous 58565769 3 176595729 176595730 A ATCC 20 INTERGENIC homozygous 57811820 3 176595779 176595780 A C 17 INTERGENIC homozygous 57811822 3 176596173 176596174 G A 13 INTERGENIC homozygous 58253973 3 176597057 176597058 A G 11 INTERGENIC homozygous 57811824 3 176597472 176597473 A C 22 INTERGENIC possibly homozygous 58253974 3 176597622 176597623 T C 14 INTERGENIC possibly homozygous 57811826 3 176597929 176597930 G GTAAATAAATAAATAAATAAA 3 INTERGENIC homozygous 58634089 3 176598005 176598021 GAAGGAAGGAGGGAGA ---------------- 13 INTERGENIC homozygous 58813027 3 176598035 176598036 G A 14 INTERGENIC homozygous 58253977 3 176598060 176598134 GGAAGGAAGGGAGGGAGAGAAGGAAGGAGGGAGAGAGGGAAGGAAGGGAGGGAGAGAAGGAAGGAGGGAGAGAC -------------------------------------------------------------------------- 17 INTERGENIC heterozygous 58565770 3 176598353 176598354 G A 25 INTERGENIC possibly homozygous 57811830 3 176598492 176598494 CA -- 24 INTERGENIC homozygous 58253978 3 176598612 176598613 T C 22 INTERGENIC possibly homozygous 57811832 3 176598716 176598717 A G 23 INTERGENIC possibly homozygous 57811834 3 176598921 176598922 C - 7 INTERGENIC homozygous 58813029 3 176598923 176598924 C - 7 INTERGENIC homozygous 58813031 3 176598925 176598926 A AGT 7 INTERGENIC homozygous 58813033 3 176598929 176598930 C T 7 INTERGENIC homozygous 58253979 3 176599871 176599872 A C 35 INTERGENIC possibly homozygous 58253980 3 176599937 176599938 A G 34 INTERGENIC homozygous 57811852 3 176600057 176600058 T G 25 INTERGENIC possibly homozygous 57811854 3 176601182 176601188 AAAACA ------ 4 INTERGENIC homozygous 58813035 3 176601386 176601387 T A 8 INTERGENIC homozygous 58253982 3 176601477 176601478 T TA 5 INTERGENIC homozygous 57811858 3 176602460 176602461 G C 13 INTERGENIC homozygous 57811862 3 176602465 176602466 T G 13 INTERGENIC homozygous 58253983 3 176602554 176602555 C T 18 INTERGENIC homozygous 58253984 3 176602666 176602675 GTTGTCGTC --------- 14 INTERGENIC homozygous 57811866 3 176603555 176603556 G A 18 INTERGENIC homozygous 58253985 3 176603571 176603572 A G 20 INTERGENIC homozygous 58253986 3 176603574 176603575 G T 20 INTERGENIC homozygous 57811868 3 176603977 176603978 G A 15 INTERGENIC homozygous 58253987 3 176604254 176604255 G C 13 INTERGENIC heterozygous 58253988 3 176604350 176604369 CACGGCATGAATAGGTTTC ------------------- 8 INTERGENIC homozygous 58565771 3 176605119 176605120 C T 10 INTERGENIC homozygous 58253989 3 176605826 176605827 G A 17 INTERGENIC homozygous 58253993 3 176605829 176605830 A G 18 INTERGENIC homozygous 57811888 3 176605832 176605833 A G 18 INTERGENIC homozygous 57811890 3 176605925 176605926 G GGAAGAA 6 INTERGENIC homozygous 58634092 3 176606420 176606421 T C 21 INTERGENIC homozygous 57811904 3 176607771 176607772 A G 23 INTERGENIC possibly homozygous 57811912 3 176608866 176608867 A AG 14 INTERGENIC heterozygous 57811914 3 176608866 176608867 A AGG 14 INTERGENIC possibly homozygous 58253994 3 176608875 176608876 T G 16 INTERGENIC possibly homozygous 58565772 3 176609086 176609087 G A 20 INTERGENIC homozygous 57811916 3 176609869 176609873 CACA ---- 7 INTERGENIC homozygous 58813037 3 176609899 176609900 C G 17 INTERGENIC homozygous 58253995 3 176609928 176609929 A G 16 INTERGENIC possibly homozygous 57811920 3 176610416 176610417 T - 5 INTERGENIC homozygous 57811922 3 176611292 176611293 G T 23 INTERGENIC homozygous 58253996 3 176614185 176614186 G GAAGA 21 INTERGENIC homozygous 58813043 3 176611387 176611388 A G 25 INTERGENIC possibly homozygous 57811926 3 176611675 176611676 C CCAAA 8 INTERGENIC possibly homozygous 58253997 3 176612892 176612893 C T 15 INTERGENIC homozygous 58253998 3 176613677 176613678 A G 20 INTERGENIC homozygous 57811936 3 176614142 176614143 C CAGAGAGAG 25 INTERGENIC possibly homozygous 58254000 3 176614142 176614143 C CAGAGAG 25 INTERGENIC heterozygous 58813041 3 176614164 176614165 C G 33 INTERGENIC homozygous 58254001 3 176592277 176592283 ACCAAC ------ 1 INTERGENIC homozygous 58674166 3 176598830 176598832 AG -- 16 INTERGENIC heterozygous 58661009 3 176598828 176598832 AGAG ---- 16 INTERGENIC heterozygous 58904351 3 176614233 176614234 G GAAGGAAGAAAGA 18 INTERGENIC homozygous 57811950 3 176614764 176614765 G A 27 INTERGENIC homozygous 58254007 3 176615295 176615296 G A 26 INTERGENIC homozygous 58254008 3 176617914 176617916 TG -- 14 INTERGENIC possibly homozygous 57811981 3 176617942 176617943 C A 17 INTERGENIC homozygous 58254009 3 176618697 176618698 G GGT 7 INTERGENIC heterozygous 57811994 3 176620407 176620423 TTGTTTGTTTGTTTGT ---------------- 14 INTERGENIC homozygous 57812004 3 176622631 176622632 C T 15 INTERGENIC homozygous 57812008 3 176622969 176622970 A - 14 INTERGENIC homozygous 57812010 3 176622976 176622977 T C 17 INTERGENIC homozygous 57812012 3 176623094 176623095 T TACACAC 7 INTERGENIC homozygous 58699912 3 176624602 176624603 C A 15 INTERGENIC homozygous 57812016 3 176628357 176628358 A - 2 GENIC homozygous 58254010 3 176628389 176628390 A AAAC 7 GENIC heterozygous 58254011 3 176628389 176628390 A AC 7 GENIC heterozygous 58813045 3 176628713 176628714 A G 29 GENIC homozygous 57812027 3 176629034 176629035 G - 23 GENIC homozygous 58254012 3 176629946 176629948 GG -- 9 GENIC homozygous 58254013 3 176630100 176630101 T C 12 GENIC homozygous 57812031 3 176630121 176630122 T C 13 GENIC homozygous 57812033 3 176630412 176630414 AA -- 9 GENIC heterozygous 57812035 3 176630413 176630414 A - 9 GENIC possibly homozygous 57812037 3 176630770 176630771 T A 23 GENIC homozygous 58254014 3 176631108 176631109 A G 15 GENIC homozygous 57812041 3 176631737 176631738 T C 30 GENIC homozygous 57812043 3 176633235 176633236 A G 16 GENIC homozygous 57812049 3 176633772 176633780 GAAATATT -------- 12 INTERGENIC homozygous 57812051 3 176634385 176634386 A ATT 15 INTERGENIC possibly homozygous 57812055 3 176634385 176634386 A ATTT 15 INTERGENIC heterozygous 58634104 3 176634702 176634703 C T 24 INTERGENIC homozygous 57812057 3 176635711 176635712 C T 27 INTERGENIC homozygous 58254016 3 176635799 176635800 T - 22 INTERGENIC possibly homozygous 57812061 3 176636119 176636120 T TA 18 INTERGENIC homozygous 57812063 3 176636260 176636261 T TC 14 INTERGENIC homozygous 57812065 3 176636267 176636268 T TC 12 INTERGENIC homozygous 57812067 3 176636276 176636277 C - 9 INTERGENIC homozygous 58634105 3 176636280 176636281 T TC 8 INTERGENIC homozygous 58634106 3 176636369 176636370 C T 8 INTERGENIC homozygous 57812077 3 176636380 176636381 T TTA 12 INTERGENIC homozygous 57812079 3 176638067 176638068 A AGT 25 INTERGENIC homozygous 58254018 3 176638344 176638345 G A 24 INTERGENIC homozygous 58254019 3 176638353 176638354 A G 21 INTERGENIC homozygous 57812085 3 176638498 176638499 G A 21 INTERGENIC homozygous 58254020 3 176639478 176639484 TCTTTA ------ 13 INTERGENIC homozygous 58699924 3 176639485 176639486 G GAA 14 INTERGENIC homozygous 58699925 3 176639504 176639510 TGTATA ------ 24 INTERGENIC homozygous 57812097 3 176639512 176639513 T TG 26 INTERGENIC homozygous 57812101 3 176639641 176639647 TGTATA ------ 8 INTERGENIC homozygous 57812105 3 176639653 176639657 TGTA ---- 7 INTERGENIC homozygous 57812107 3 176639677 176639679 TG -- 14 INTERGENIC homozygous 58699926 3 176639687 176639769 TGTGTGTCTTTATGTGTATGTGTGTATGTGTGTGTATATATGTGTGTATATATGTGTGTATGTGTATGTGTGTGAGTGTATG ---------------------------------------------------------------------------------- 61 INTERGENIC homozygous 58699927 3 176639850 176639851 G A 40 INTERGENIC homozygous 57812113 3 176639874 176639875 A - 43 INTERGENIC homozygous 57812115 3 176639876 176639877 A C 44 INTERGENIC homozygous 57812117 3 176639919 176639920 G A 46 INTERGENIC homozygous 58254030 3 176640358 176640359 A G 21 INTERGENIC homozygous 57812119 3 176640494 176640495 G A 12 INTERGENIC homozygous 58254031 3 176640583 176640584 G GGAAGGAGTGA 22 INTERGENIC homozygous 58254032 3 176640599 176640600 G GAAGAAAGA 5 INTERGENIC homozygous 58813047 3 176640621 176640622 A AG 8 INTERGENIC homozygous 58699930 3 176640625 176640626 A G 8 INTERGENIC homozygous 58699931 3 176640632 176640633 A AGG 8 INTERGENIC homozygous 58699932 3 176640639 176640640 G GA 8 INTERGENIC homozygous 58254040 3 176641021 176641022 A G 14 INTERGENIC homozygous 57812131 3 176641077 176641078 G GA 13 INTERGENIC homozygous 58254041 3 176641477 176641478 A - 11 INTERGENIC heterozygous 58443934 3 176641556 176641557 G GAAGCGCA 8 INTERGENIC possibly homozygous 57812135 3 176641593 176641594 A AAAAAAAGAACC 2 INTERGENIC homozygous 58699934 3 176641604 176641606 CC -- 2 INTERGENIC homozygous 57812143 3 176641708 176641709 C A 15 INTERGENIC possibly homozygous 58254043 3 176641729 176641730 A T 12 INTERGENIC homozygous 57812145 3 176641816 176641817 T C 25 INTERGENIC homozygous 58254044 3 176641863 176641864 G A 30 INTERGENIC homozygous 58254045 3 176644287 176644305 TCTCTCTCTCTCTCTCTC ------------------ 7 INTERGENIC homozygous 58813049 3 176642035 176642037 AA -- 28 INTERGENIC homozygous 58254046 3 176642085 176642086 A T 31 INTERGENIC homozygous 57812151