chr	start	stop	reference nuc	variant nuc	depth	genic status	zygosity	variant ID
3	52389327	52389328	A	-	3	INTERGENIC	homozygous	58684620
3	52389350	52389351	A	ACT	4	INTERGENIC	homozygous	58684621
3	52389451	52389452	T	G	8	INTERGENIC	homozygous	58684622
3	52389460	52389461	T	C	7	INTERGENIC	homozygous	58684623
3	52389499	52389500	C	T	4	INTERGENIC	homozygous	58684624
3	52389551	52389552	G	C	5	INTERGENIC	homozygous	58684625
3	52389556	52389557	A	G	5	INTERGENIC	homozygous	58684626
3	52389900	52389901	T	C	4	INTERGENIC	homozygous	58684627
3	52389984	52389985	C	T	6	INTERGENIC	homozygous	58684628
3	52390289	52390290	C	T	5	INTERGENIC	homozygous	58684629
3	52390364	52390365	A	C	3	INTERGENIC	homozygous	58684630
3	52390604	52390605	G	C	3	INTERGENIC	homozygous	58684631
3	52390702	52390703	C	CT	6	INTERGENIC	homozygous	57375981
3	52390733	52390734	G	C	3	INTERGENIC	homozygous	57375982
3	52390758	52390759	A	-	3	INTERGENIC	homozygous	57375983
3	52390768	52390769	G	C	4	INTERGENIC	homozygous	57375984
3	52390774	52390775	A	-	5	INTERGENIC	homozygous	57375985
3	52390786	52390787	G	-	7	INTERGENIC	homozygous	57375986
3	52390790	52390791	A	-	7	INTERGENIC	homozygous	57375987
3	52390924	52390925	A	T	5	INTERGENIC	homozygous	58684632
3	52391232	52391233	A	ATACTTCTGGTAG	2	INTERGENIC	homozygous	58684633
3	52391261	52391304	CACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	-------------------------------------------	8	INTERGENIC	homozygous	58684634
3	52391666	52391667	C	T	7	INTERGENIC	homozygous	58684635
3	52391718	52391719	T	C	10	INTERGENIC	homozygous	58684636
3	52391932	52391933	G	C	6	INTERGENIC	homozygous	58684637
3	52392083	52392084	C	T	3	INTERGENIC	homozygous	58684638
3	52392121	52392122	A	G	3	INTERGENIC	homozygous	58684639
3	52392192	52392193	G	A	4	INTERGENIC	homozygous	58684640
3	52392357	52392358	C	T	5	INTERGENIC	homozygous	58684641
3	52392631	52392632	G	T	7	INTERGENIC	homozygous	58684642
3	52392655	52392656	G	A	5	INTERGENIC	homozygous	58684643
3	52392673	52392674	T	A	8	INTERGENIC	homozygous	58684644
3	52392872	52392873	A	-	7	INTERGENIC	homozygous	58684645
3	52392933	52392943	AGAGAGAGAG	----------	2	INTERGENIC	homozygous	58582898
3	52393037	52393038	G	A	10	INTERGENIC	homozygous	58684646
3	52393433	52393434	C	T	18	INTERGENIC	homozygous	58684647
3	52394689	52394690	A	C	18	INTERGENIC	homozygous	58684648
3	52394770	52394771	C	T	12	INTERGENIC	homozygous	58684649
3	52394843	52394844	C	T	9	INTERGENIC	homozygous	58684650
3	52394949	52394950	C	-	12	INTERGENIC	homozygous	58684651
3	52394954	52394955	C	A	11	INTERGENIC	homozygous	58684652
3	52395057	52395058	C	T	4	INTERGENIC	homozygous	57375988
3	52395060	52395061	T	-	2	INTERGENIC	homozygous	58684653
3	52395254	52395255	A	G	3	INTERGENIC	homozygous	58684654
3	52395333	52395334	T	A	8	INTERGENIC	homozygous	58684655
3	52395848	52395849	T	A	8	INTERGENIC	homozygous	58684656
3	52396111	52396112	C	CT	12	INTERGENIC	homozygous	58684657
3	52396480	52396481	A	G	10	INTERGENIC	possibly homozygous	58684658
3	52396503	52396504	C	CAAAACCCATGGGAGGA	16	INTERGENIC	possibly homozygous	58684659
3	52396602	52396603	G	A	12	INTERGENIC	homozygous	58684660
3	52396699	52396700	C	G	9	INTERGENIC	homozygous	58684661
3	52396965	52396966	T	G	18	INTERGENIC	homozygous	58684662
3	52397142	52397143	A	ATGTT	8	INTERGENIC	homozygous	58684663
3	52397227	52397228	T	G	10	INTERGENIC	homozygous	58684664
3	52397539	52397540	A	G	13	INTERGENIC	homozygous	58684665
3	52397760	52397761	C	-	11	INTERGENIC	homozygous	58684666
3	52397783	52397784	C	T	12	INTERGENIC	homozygous	58684667
3	52397837	52397838	T	TA	12	INTERGENIC	homozygous	58684668
3	52398234	52398235	G	GA	10	INTERGENIC	homozygous	58684669
3	52398916	52398917	A	C	6	INTERGENIC	homozygous	58684670
3	52398952	52398953	A	C	2	INTERGENIC	homozygous	58684671
3	52399085	52399086	G	A	19	INTERGENIC	homozygous	58684672
3	52399117	52399118	C	CATGT	12	INTERGENIC	homozygous	58684673
3	52399808	52399809	T	C	13	INTERGENIC	homozygous	58684674
3	52400247	52400248	C	G	13	INTERGENIC	homozygous	58684675
3	52400310	52400316	TGTGTG	------	13	INTERGENIC	homozygous	58684676
3	52400320	52400321	T	C	12	INTERGENIC	homozygous	58684677
3	52400322	52400323	T	C	12	INTERGENIC	homozygous	58684678
3	52400324	52400325	T	C	11	INTERGENIC	homozygous	58684679
3	52400326	52400327	T	C	10	INTERGENIC	homozygous	58684680
3	52400328	52400329	T	C	10	INTERGENIC	homozygous	58684681
3	52400330	52400331	T	C	9	INTERGENIC	homozygous	58684682
3	52400847	52400848	A	G	7	INTERGENIC	homozygous	58684683
3	52400962	52400963	G	T	5	INTERGENIC	homozygous	58684684
3	52401529	52401530	G	GCA	2	INTERGENIC	heterozygous	58684685
3	52401540	52401542	CA	--	1	INTERGENIC	homozygous	58684686
3	52401546	52401548	CA	--	1	INTERGENIC	homozygous	58684687
3	52401551	52401552	G	GTT	1	INTERGENIC	homozygous	58684688
3	52401562	52401563	T	TGTGTGTGTGTGTGTGTGTGTGTGTGTGC	1	INTERGENIC	homozygous	58684689
3	52401942	52401943	T	C	11	INTERGENIC	homozygous	58684690
3	52402135	52402136	A	G	12	INTERGENIC	homozygous	58684691
3	52402166	52402167	G	A	12	INTERGENIC	homozygous	58684692
3	52402178	52402179	G	T	12	INTERGENIC	homozygous	58684693
3	52402234	52402235	C	A	10	INTERGENIC	homozygous	58684694
3	52402241	52402242	A	G	12	INTERGENIC	homozygous	58684695
3	52402267	52402268	A	G	13	INTERGENIC	homozygous	58684696
3	52402268	52402269	G	A	14	INTERGENIC	homozygous	58684697
3	52402282	52402283	T	C	13	INTERGENIC	homozygous	58684698
3	52402284	52402285	C	T	13	INTERGENIC	homozygous	58684699
3	52402290	52402291	A	C	10	INTERGENIC	homozygous	58684700
3	52402319	52402320	A	T	7	INTERGENIC	homozygous	58684701
3	52402396	52402397	A	G	15	INTERGENIC	homozygous	58684702
3	52403047	52403048	T	C	10	INTERGENIC	homozygous	58684703
3	52403138	52403139	G	A	7	INTERGENIC	homozygous	58684704
3	52403330	52403331	C	-	15	INTERGENIC	homozygous	58684705
3	52404075	52404079	ACAC	----	2	INTERGENIC	homozygous	58684706
3	52405259	52405260	T	G	9	INTERGENIC	homozygous	58684707
3	52405535	52405536	A	C	7	INTERGENIC	homozygous	58684708
3	52405716	52405717	C	T	12	INTERGENIC	homozygous	58684709
3	52406150	52406151	T	TGTTCTCTCAAAAACCTACCAGTCCTATAGATTTTTTTGCCAATGGTAATTTCCTAGATAAAGCACAGCACACAATTTA	24	INTERGENIC	homozygous	58684710
3	52406161	52406162	T	C	24	INTERGENIC	homozygous	58684711
3	52406216	52406217	G	C	9	INTERGENIC	homozygous	58684712
3	52406217	52406218	T	C	9	INTERGENIC	homozygous	58684713
3	52407413	52407414	A	G	5	INTERGENIC	homozygous	58684718
3	52406219	52406222	AAG	---	9	INTERGENIC	homozygous	58684714
3	52406226	52406241	CTTAATAATAGATAG	---------------	11	INTERGENIC	homozygous	58684715
3	52406963	52406964	T	C	8	INTERGENIC	homozygous	58684716
3	52409414	52409415	G	A	4	INTERGENIC	homozygous	58684719
3	52411730	52411731	T	TCTCTCTC	10	INTERGENIC	heterozygous	58684720
3	52412204	52412218	ACACACACACACAC	--------------	1	INTERGENIC	homozygous	58684721
3	52421724	52421725	A	G	9	INTERGENIC	homozygous	58684722
3	52423564	52423565	A	AGACAGAGAGAGAGAG	1	INTERGENIC	homozygous	58684723
3	52423598	52423599	A	AAGG	1	INTERGENIC	homozygous	58684724
3	52423645	52423649	AGAT	----	2	INTERGENIC	homozygous	58684725
3	52424400	52424401	T	G	10	INTERGENIC	homozygous	58684726
3	52434470	52434471	C	A	13	GENIC	homozygous	58684727
3	52435389	52435390	T	G	14	GENIC	homozygous	58684728
3	52437361	52437362	C	A	11	GENIC	homozygous	58684729
3	52437798	52437799	C	-	13	GENIC	homozygous	58582899
3	52438463	52438464	G	GA	9	GENIC	possibly homozygous	58684730
3	52442296	52442297	A	C	5	GENIC	homozygous	58684731
3	52442479	52442480	G	A	7	GENIC	homozygous	58684732
3	52443743	52443744	G	GT	4	GENIC	homozygous	58582901
3	52445146	52445147	G	A	6	GENIC	homozygous	58684734
3	52445167	52445168	T	G	5	GENIC	homozygous	58684735
3	52445515	52445516	G	A	8	GENIC	homozygous	58684736
3	52446023	52446024	C	T	6	GENIC	homozygous	58684737
3	52446122	52446123	G	A	5	GENIC	homozygous	58684738
3	52447033	52447034	T	TA	12	INTERGENIC	homozygous	58684739
3	52447302	52447303	T	A	6	INTERGENIC	homozygous	58684740
3	52448373	52448374	A	G	7	INTERGENIC	homozygous	58684741
3	52448736	52448737	C	A	4	INTERGENIC	homozygous	58684742
3	52448905	52448906	C	-	6	INTERGENIC	homozygous	57375992
3	52448912	52448913	C	-	6	INTERGENIC	homozygous	57375993
3	52449601	52449602	G	T	6	INTERGENIC	homozygous	58684743
3	52449656	52449657	C	A	7	INTERGENIC	homozygous	58684744
3	52450152	52450153	A	G	10	INTERGENIC	homozygous	58684745
3	52450289	52450290	A	AAG	2	INTERGENIC	homozygous	58684746
3	52450990	52450991	A	G	6	INTERGENIC	homozygous	58684747
3	52451040	52451041	G	A	7	INTERGENIC	homozygous	58684748
3	52452531	52452532	T	TTTTGTTTG	13	INTERGENIC	homozygous	58684749
3	52452655	52452656	A	G	9	INTERGENIC	homozygous	58684750
3	52453389	52453390	G	A	9	INTERGENIC	homozygous	58684751
3	52453596	52453597	G	T	10	INTERGENIC	homozygous	58684752
3	52454173	52454174	A	C	14	INTERGENIC	homozygous	58684753
3	52454480	52454481	A	C	4	INTERGENIC	homozygous	58684754
3	52456656	52456657	C	T	9	INTERGENIC	homozygous	58684758
3	52455694	52455696	AC	--	6	INTERGENIC	heterozygous	58582902
3	52456313	52456314	T	TC	8	INTERGENIC	homozygous	58684755
3	52456441	52456442	C	G	12	INTERGENIC	homozygous	58684756
3	52456637	52456654	ACACACACACACACACA	-----------------	5	INTERGENIC	homozygous	58684757
3	52456662	52456663	C	T	8	INTERGENIC	homozygous	58684759
3	52456984	52456985	G	A	5	INTERGENIC	homozygous	57375994
3	52457196	52457197	A	G	4	INTERGENIC	homozygous	58684760
3	52457217	52457218	C	T	7	INTERGENIC	homozygous	58684761
3	52457927	52457929	TT	--	11	INTERGENIC	homozygous	58684762
3	52458377	52458378	G	GA	11	INTERGENIC	homozygous	58684763
3	52458708	52458709	G	A	9	INTERGENIC	homozygous	58684764
3	52458931	52458932	A	G	13	INTERGENIC	homozygous	58684765
3	52459920	52459921	C	CTTT	2	INTERGENIC	homozygous	58684766
3	52459935	52459939	TTTT	----	3	INTERGENIC	homozygous	58684767
3	52459995	52459996	T	C	5	INTERGENIC	homozygous	58684768
3	52460284	52460285	C	T	12	INTERGENIC	homozygous	58684769
3	52460597	52460598	C	T	8	INTERGENIC	homozygous	58684770
3	52460925	52460926	C	T	16	INTERGENIC	homozygous	58684771
3	52461044	52461045	C	T	8	INTERGENIC	homozygous	58684772
3	52461206	52461207	G	A	14	INTERGENIC	possibly homozygous	58684773
3	52461243	52461244	A	G	14	INTERGENIC	homozygous	58684774
3	52461316	52461320	AGGC	----	3	INTERGENIC	homozygous	58684775
3	52462625	52462626	A	G	10	INTERGENIC	homozygous	57375995
3	52463732	52463734	TG	--	1	INTERGENIC	homozygous	58684776
3	52464110	52464114	AGAC	----	4	INTERGENIC	homozygous	58684778
3	52464118	52464120	AC	--	4	INTERGENIC	homozygous	58684779
3	52466086	52466087	A	G	10	INTERGENIC	homozygous	58684780
3	52466763	52466764	T	TACAC	3	INTERGENIC	homozygous	58684781
3	52467611	52467612	C	CT	7	INTERGENIC	homozygous	58684782
3	52469196	52469197	G	A	14	INTERGENIC	homozygous	58684784
3	52472569	52472570	A	T	10	INTERGENIC	homozygous	58684785
3	52473102	52473103	C	CAT	2	INTERGENIC	homozygous	58684786
3	52473909	52473910	G	C	6	INTERGENIC	homozygous	58684787
3	52474502	52474503	G	A	8	INTERGENIC	homozygous	58684788
3	52475108	52475109	A	AATGG	2	INTERGENIC	homozygous	58684789
3	52475165	52475166	G	GTGGATGGA	5	INTERGENIC	homozygous	58684791
3	52475713	52475714	C	T	10	INTERGENIC	homozygous	58684792
3	52475900	52475901	A	C	6	INTERGENIC	homozygous	58684793
3	52475901	52475902	C	A	6	INTERGENIC	homozygous	58684794
3	52476121	52476137	CACACACACACACACA	----------------	7	INTERGENIC	homozygous	58684795
3	52476177	52476179	CG	--	8	INTERGENIC	homozygous	58684796
3	52476250	52476260	ACACACACAT	----------	8	INTERGENIC	homozygous	58684797
3	52476399	52476400	T	TAC	8	INTERGENIC	homozygous	58684798
3	52476445	52476447	CT	--	2	INTERGENIC	homozygous	58684799
3	52476450	52476457	ACACACA	-------	1	INTERGENIC	homozygous	58684800
3	52476458	52476483	ACACACACATTCACACACACATTCA	-------------------------	2	INTERGENIC	homozygous	58684801
3	52476579	52476580	C	T	7	INTERGENIC	homozygous	58684802
3	52476932	52476933	T	C	12	INTERGENIC	homozygous	58684803
3	52477609	52477610	C	CA	8	INTERGENIC	possibly homozygous	58684804
3	52478009	52478010	T	-	12	INTERGENIC	homozygous	58684805
3	52478941	52478942	C	CA	6	INTERGENIC	homozygous	57375999
3	52482906	52482907	C	T	9	GENIC	homozygous	58684806
3	52483669	52483670	T	C	14	GENIC	homozygous	58684807
3	52484392	52484393	A	-	10	GENIC	homozygous	58684808
3	52484966	52484970	AAAC	----	8	GENIC	homozygous	58684809
3	52484978	52484979	A	C	9	GENIC	homozygous	58684810
3	52485239	52485240	T	TTCTC	3	GENIC	heterozygous	58544605
3	52485239	52485240	T	TTC	3	GENIC	heterozygous	59466127
3	52485982	52485983	T	C	8	GENIC	homozygous	58684811
3	52486160	52486161	T	-	8	GENIC	homozygous	58684812
3	52486171	52486172	T	A	9	GENIC	homozygous	58684813
3	52486756	52486757	C	T	12	GENIC	homozygous	58684814
3	52487072	52487073	G	GTTT	13	GENIC	homozygous	58684815
3	52487876	52487877	A	G	10	GENIC	homozygous	58684816
3	52488034	52488035	C	A	8	GENIC	homozygous	58684817
3	52488314	52488315	T	A	9	GENIC	homozygous	58684818
3	52489498	52489499	T	G	10	GENIC	homozygous	58684819
3	52491232	52491345	AGAACTGTTAACTTTTTTTTTTTTTGGTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGTAAGCGCTCTACCACTGAGCTAAATCCCCAGCCCCT	-----------------------------------------------------------------------------------------------------------------	10	GENIC	homozygous	58684820
3	52492335	52492336	G	GGTGT	3	GENIC	homozygous	58684821
3	52492388	52492389	A	G	5	GENIC	homozygous	58684822
3	52493033	52493035	TT	--	15	GENIC	homozygous	58544606
3	52493035	52493036	T	A	15	GENIC	homozygous	58544607
3	52493038	52493039	G	GAGTAT	15	GENIC	homozygous	58544608
3	52493103	52493108	ATTTT	-----	9	GENIC	homozygous	57376006
3	52493109	52493110	A	G	9	GENIC	homozygous	58582905
3	52493112	52493113	G	GGAAA	9	GENIC	homozygous	57376007
3	52493172	52493173	A	AT	7	GENIC	homozygous	57376008
3	52493191	52493192	G	GT	9	GENIC	homozygous	57376009
3	52493278	52493279	C	A	11	GENIC	homozygous	57376010
3	52493282	52493283	C	T	11	GENIC	homozygous	57376011
3	52493302	52493303	C	A	8	GENIC	homozygous	57376012
3	52493314	52493315	C	A	11	GENIC	homozygous	57376013
3	52493662	52493663	A	-	8	GENIC	homozygous	58667452
3	52493711	52493712	C	T	8	GENIC	homozygous	58684824
3	52493839	52493840	G	A	5	GENIC	homozygous	58684825
3	52493931	52493932	G	A	4	GENIC	homozygous	58684826
3	52493957	52493958	C	CA	7	GENIC	heterozygous	58648974
3	52494174	52494175	T	C	4	GENIC	homozygous	58684827
3	52494640	52494641	A	G	8	GENIC	homozygous	58684828
3	52495235	52495236	T	C	13	GENIC	homozygous	58667453
3	52495425	52495426	A	-	8	GENIC	heterozygous	59235916
3	52495814	52495815	C	CTGTT	8	GENIC	homozygous	58684829
3	52495839	52495840	G	GGTT	8	GENIC	homozygous	58684830
3	52496247	52496248	G	A	13	GENIC	homozygous	58684831
3	52497184	52497185	G	A	9	GENIC	homozygous	58353842
3	52499363	52499364	C	T	13	GENIC	homozygous	58353844
3	52500666	52500667	G	A	7	GENIC	homozygous	58353846
3	52501281	52501295	ACACACACACACAC	--------------	3	GENIC	homozygous	58684834
3	52504806	52504807	G	GAC	9	GENIC	homozygous	58667454
3	52504888	52504889	A	G	11	GENIC	homozygous	58353850
3	52505105	52505106	T	G	18	GENIC	homozygous	58353852
3	52507572	52507575	TTT	---	8	GENIC	homozygous	57376016
3	52509680	52509688	AAGGAAGA	--------	6	GENIC	homozygous	58684836
3	52513706	52513707	C	CA	10	GENIC	homozygous	57376017
3	52514045	52514055	GTGTGTGTGT	----------	5	GENIC	homozygous	58684837
3	52518932	52518933	T	C	3	GENIC	homozygous	58353858
3	52518942	52518943	T	A	4	GENIC	homozygous	58353860
3	52522054	52522055	T	G	8	GENIC	homozygous	58353868
3	52519012	52519013	G	A	12	GENIC	homozygous	58353862
3	52519093	52519094	C	A	14	GENIC	homozygous	58353864
3	52519277	52519278	C	T	7	GENIC	homozygous	58353866
3	52520559	52520560	C	CAG	10	GENIC	homozygous	57376020
3	52522181	52522182	C	T	15	GENIC	homozygous	58353870
3	52522830	52522831	C	T	11	GENIC	homozygous	58353872
3	52522865	52522866	A	G	18	GENIC	homozygous	58353874
3	52523805	52523806	A	G	17	GENIC	homozygous	58353876
3	52528892	52528908	TGTGTGTGTGTGTGTG	----------------	9	GENIC	homozygous	58684838
3	52523912	52523913	A	G	22	GENIC	homozygous	58353878
3	52524326	52524327	C	A	12	GENIC	homozygous	58353880
3	52525472	52525473	A	C	11	GENIC	homozygous	58353882
3	52528931	52528932	G	A	8	GENIC	homozygous	58684839
3	52530347	52530348	C	CA	9	GENIC	homozygous	57376023
3	52530391	52530392	C	CA	9	GENIC	homozygous	58353886
3	52530466	52530468	TG	--	1	GENIC	homozygous	58582908
3	52531247	52531248	G	A	13	GENIC	homozygous	58353888
3	52531996	52531997	C	T	10	GENIC	homozygous	58353890
3	52532836	52532837	G	A	11	GENIC	homozygous	58353892
3	52533029	52533030	T	A	14	GENIC	homozygous	58353894