chr	start	stop	reference nuc	variant nuc	depth	genic status	zygosity	variant ID
3	52584689	52584690	A	-	7	INTERGENIC	homozygous	58684866
3	52586492	52586493	C	CT	12	INTERGENIC	homozygous	58684867
3	52588623	52588624	G	A	19	INTERGENIC	homozygous	58684868
3	52588646	52588647	T	C	18	INTERGENIC	homozygous	58354049
3	52588846	52588847	G	GCATA	12	INTERGENIC	homozygous	58354051
3	52589152	52589153	T	C	14	INTERGENIC	homozygous	58684869
3	52589313	52589314	G	GA	9	INTERGENIC	homozygous	58684870
3	52589592	52589593	A	G	9	INTERGENIC	homozygous	58354053
3	52590034	52590035	T	TG	15	INTERGENIC	homozygous	58354055
3	52591495	52591496	A	G	17	INTERGENIC	homozygous	58354059
3	52593373	52593374	A	T	9	INTERGENIC	homozygous	58354069
3	52593484	52593485	T	A	11	INTERGENIC	homozygous	58684871
3	52594242	52594243	T	TA	13	INTERGENIC	homozygous	58354071
3	52594917	52594918	G	A	16	INTERGENIC	homozygous	58684872
3	52595605	52595606	A	G	18	INTERGENIC	homozygous	58354077
3	52595618	52595619	C	A	12	INTERGENIC	homozygous	58354079
3	52596415	52596416	T	C	15	INTERGENIC	homozygous	58354083
3	52596568	52596569	A	G	25	INTERGENIC	homozygous	58354085
3	52600834	52600835	A	G	12	INTERGENIC	homozygous	58684873
3	52605881	52605882	A	G	10	INTERGENIC	homozygous	58354089
3	52606469	52606470	G	GA	8	INTERGENIC	possibly homozygous	58582911
3	52606470	52606471	A	-	8	INTERGENIC	heterozygous	59419902
3	52606682	52606683	T	G	11	INTERGENIC	homozygous	58684874
3	52607046	52607047	G	A	14	INTERGENIC	homozygous	58684875
3	52607959	52607960	C	T	8	INTERGENIC	homozygous	58684876
3	52607966	52607967	C	T	9	INTERGENIC	homozygous	58684877
3	52608287	52608288	C	CAAT	6	INTERGENIC	homozygous	58354091
3	52608361	52608362	C	T	17	INTERGENIC	homozygous	58354093
3	52608851	52608852	T	G	17	INTERGENIC	homozygous	58354097
3	52611059	52611060	A	G	13	INTERGENIC	homozygous	58684878
3	52611445	52611446	A	G	13	INTERGENIC	homozygous	58684879
3	52613274	52613275	T	TCA	8	INTERGENIC	homozygous	58684880
3	52614771	52614772	C	A	22	INTERGENIC	homozygous	58354105
3	52615415	52615416	T	-	11	INTERGENIC	homozygous	58582912
3	52615659	52615660	G	A	17	GENIC	homozygous	58684881
3	52615688	52615689	T	C	11	GENIC	homozygous	58354109
3	52615969	52615979	TGCTACTTCC	----------	6	INTERGENIC	homozygous	58354113
3	52616821	52616822	G	A	2	INTERGENIC	homozygous	58354121
3	52617306	52617307	T	G	9	INTERGENIC	homozygous	58684882
3	52617376	52617377	G	GGAGA	11	INTERGENIC	homozygous	58354123
3	52617646	52617647	T	C	17	INTERGENIC	homozygous	58354125
3	52618103	52618104	T	-	13	INTERGENIC	homozygous	58354127
3	52620740	52620741	T	A	9	INTERGENIC	homozygous	57376037
3	52620741	52620742	T	G	9	INTERGENIC	homozygous	57376038
3	52620746	52620747	C	T	8	INTERGENIC	homozygous	57376039
3	52621235	52621236	G	C	16	INTERGENIC	homozygous	58354133
3	52621317	52621318	G	A	9	INTERGENIC	homozygous	58354135
3	52628003	52628023	AAATAAATAAATAAATAAAT	--------------------	1	INTERGENIC	homozygous	58684883
3	52628571	52628572	A	G	20	INTERGENIC	homozygous	58354139
3	52628870	52628871	G	-	6	INTERGENIC	homozygous	58354141
3	52629247	52629248	C	T	5	INTERGENIC	homozygous	58354143
3	52632469	52632470	G	T	3	INTERGENIC	homozygous	58354147
3	52632717	52632718	T	-	15	INTERGENIC	homozygous	58354149
3	52632985	52632986	A	G	18	INTERGENIC	homozygous	58354151
3	52633127	52633128	A	AGTGTGT	3	INTERGENIC	heterozygous	59419904
3	52634370	52634371	A	-	4	INTERGENIC	homozygous	58354153
3	52635742	52635743	T	C	10	INTERGENIC	homozygous	58684886
3	52638413	52638414	C	CT	2	INTERGENIC	homozygous	58684887
3	52638457	52638458	G	T	6	INTERGENIC	homozygous	58684888
3	52640436	52640437	G	A	14	INTERGENIC	homozygous	58684889
3	52641010	52641011	A	C	19	INTERGENIC	homozygous	58684890
3	52641095	52641096	C	T	20	INTERGENIC	homozygous	58684891
3	52641151	52641152	G	GT	8	INTERGENIC	possibly homozygous	58354157
3	52643343	52643344	T	C	12	INTERGENIC	homozygous	58684893
3	52643939	52643940	C	T	15	INTERGENIC	homozygous	58684894
3	52644337	52644338	C	T	16	INTERGENIC	homozygous	58684895
3	52644545	52644546	C	A	3	INTERGENIC	homozygous	58684896
3	52644748	52644749	A	C	12	INTERGENIC	homozygous	58684897
3	52644854	52644855	T	A	7	INTERGENIC	homozygous	58354165
3	52644925	52644926	A	G	17	INTERGENIC	homozygous	58684898
3	52645217	52645218	C	T	7	INTERGENIC	homozygous	58684899
3	52645253	52645254	C	CAGAGAGAGAGAGAG	4	INTERGENIC	homozygous	58684900
3	52645329	52645331	AT	--	12	INTERGENIC	homozygous	58684902
3	52645351	52645371	TGTGTGTGTGTGTGTGTGTG	--------------------	11	INTERGENIC	homozygous	58684903
3	52645535	52645536	A	G	22	INTERGENIC	homozygous	58684904
3	52645842	52645843	G	A	15	INTERGENIC	homozygous	58684905
3	52646139	52646140	T	TG	17	INTERGENIC	homozygous	58684906
3	52646593	52646598	CCCCC	-----	9	INTERGENIC	homozygous	58684907
3	52649340	52649341	T	TA	12	INTERGENIC	homozygous	58354170
3	52649346	52649347	C	A	12	INTERGENIC	homozygous	58544613
3	52649356	52649357	G	GA	14	INTERGENIC	homozygous	57376047
3	52649624	52649625	G	GT	12	INTERGENIC	homozygous	57376048
3	52650664	52650665	A	-	2	INTERGENIC	homozygous	58684910
3	52650868	52650872	GTTT	----	13	INTERGENIC	homozygous	58354178
3	52651365	52651366	A	G	14	INTERGENIC	homozygous	58354180
3	52652179	52652180	T	TGAGATTG	13	INTERGENIC	homozygous	58354182
3	52652782	52652904	GTTTCTTATTTTTTTTTTTTTGGTTCTTTTTTTTTTTTTTTTTTTTCCGGAGCTGGGGACCGTACCCAGGGCCTTGCGCTTCCTAGGTAAGCGCTCTACCACTGAGCTAAATCCCCAGCCCC	--------------------------------------------------------------------------------------------------------------------------	17	INTERGENIC	homozygous	58544614
3	52653653	52653654	T	C	7	INTERGENIC	homozygous	58354184
3	52654872	52654873	T	C	9	INTERGENIC	homozygous	58354186
3	52656012	52656013	G	T	7	GENIC	homozygous	58684912
3	52656506	52656507	A	AG	3	GENIC	homozygous	57376050
3	52656511	52656512	A	AG	3	GENIC	homozygous	57376051
3	52657076	52657077	A	G	5	GENIC	homozygous	58354188
3	52657843	52657844	A	-	11	GENIC	homozygous	58354190
3	52657891	52657892	C	T	13	GENIC	homozygous	58354192
3	52657931	52657932	C	T	16	GENIC	homozygous	58354194
3	52658043	52658044	T	C	13	GENIC	homozygous	58354196
3	52658182	52658184	GT	--	10	GENIC	homozygous	58684914
3	52659507	52659508	G	A	20	GENIC	homozygous	58354204
3	52660645	52660646	C	CA	10	GENIC	homozygous	58354206
3	52660873	52660874	A	G	18	GENIC	homozygous	58684915
3	52660902	52660903	T	TAATA	10	GENIC	homozygous	58354208
3	52661013	52661014	G	GGAGGCA	8	GENIC	homozygous	58684916
3	52661121	52661125	ATAC	----	10	GENIC	homozygous	58354210
3	52661748	52661749	C	T	20	GENIC	homozygous	58354214
3	52661760	52661761	G	A	15	GENIC	homozygous	58354216
3	52661977	52661978	C	T	14	GENIC	homozygous	58354218