chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 144059623 144059624 T - 19 GENIC possibly homozygous 58218823 3 144059847 144059848 G A 33 GENIC homozygous 58218825 3 144060199 144060200 T C 21 GENIC homozygous 58218827 3 144060228 144060229 C G 18 GENIC homozygous 58218829 3 144060652 144060653 C G 20 GENIC homozygous 57712704 3 144062558 144062559 T C 31 GENIC homozygous 58218831 3 144062798 144062799 G A 26 GENIC homozygous 58218833 3 144062909 144062910 A - 26 GENIC homozygous 58218835 3 144064008 144064009 A C 29 GENIC homozygous 58218837 3 144064072 144064073 G A 26 GENIC homozygous 58218839 3 144064244 144064245 T C 26 GENIC homozygous 58218841 3 144064571 144064572 A AT 21 GENIC homozygous 58218843 3 144066759 144066760 G C 23 GENIC homozygous 58218845 3 144066820 144066821 G C 25 GENIC homozygous 58218847 3 144067503 144067504 A - 23 GENIC homozygous 58218849 3 144067817 144067819 AA -- 24 GENIC homozygous 58218851 3 144067993 144067996 AAA --- 14 GENIC homozygous 58218853 3 144068702 144068703 A G 2 GENIC homozygous 57712713 3 144068900 144068901 A G 15 GENIC homozygous 57712714 3 144069125 144069126 T TCC 5 GENIC homozygous 58323056 3 144069614 144069615 G A 28 GENIC homozygous 58218855 3 144069617 144069618 T G 28 GENIC homozygous 57712715 3 144069740 144069741 G T 15 GENIC homozygous 58218857 3 144070256 144070257 T C 26 GENIC homozygous 57712716 3 144071698 144071699 G A 30 GENIC homozygous 58218883 3 144071794 144071795 T A 18 GENIC homozygous 57712720 3 144072202 144072203 G T 18 GENIC homozygous 58218885 3 144072220 144072221 C T 18 GENIC homozygous 58218887 3 144083826 144083827 A T 27 GENIC homozygous 57712746 3 144083928 144083929 G A 21 GENIC homozygous 58218905 3 144084182 144084183 A C 32 GENIC homozygous 57712748 3 144084295 144084296 G A 27 GENIC homozygous 57712749 3 144084844 144084845 C T 28 GENIC homozygous 57712751 3 144085421 144085422 G T 28 GENIC homozygous 57712752 3 144085547 144085548 T C 23 GENIC homozygous 57712753 3 144085920 144085921 T C 29 GENIC homozygous 57712754 3 144086169 144086170 T C 29 GENIC homozygous 57712755 3 144086454 144086455 C A 22 GENIC homozygous 57712756 3 144086661 144086662 G A 19 GENIC homozygous 57712757 3 144087363 144087364 A G 34 GENIC homozygous 57712758 3 144087491 144087492 A C 32 GENIC homozygous 57712759 3 144088844 144088850 TGTGTG ------ 16 GENIC homozygous 57712763 3 144088889 144088890 C T 23 GENIC homozygous 57712764 3 144090413 144090414 C T 24 GENIC homozygous 57712768 3 144090653 144090654 C CT 17 GENIC homozygous 58218909 3 144090776 144090777 A T 17 GENIC homozygous 58218911 3 144091561 144091562 G A 21 GENIC homozygous 58218913 3 144093107 144093108 A G 24 GENIC homozygous 58218915 3 144095770 144095873 AAAAATATCTTGAAGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAGAAAAA ------------------------------------------------------------------------------------------------------- 20 GENIC homozygous 58561742 3 144096838 144096839 A C 30 GENIC homozygous 58218917 3 144098050 144098051 G - 25 GENIC homozygous 57712776 3 144099781 144099782 A AG 22 GENIC homozygous 58218919 3 144099839 144099840 A C 20 GENIC homozygous 58218921 3 144100117 144100118 A G 37 GENIC homozygous 58218923 3 144100262 144100263 A AT 25 GENIC homozygous 58218925 3 144100326 144100327 A G 35 GENIC homozygous 58218927 3 144100809 144100810 C T 37 GENIC homozygous 58218931 3 144100893 144100894 T C 23 GENIC possibly homozygous 58218933 3 144101218 144101219 A AC 19 GENIC homozygous 58218935 3 144101228 144101229 A C 25 GENIC homozygous 58218937 3 144101611 144101612 C G 26 GENIC homozygous 58218939 3 144101729 144101730 G A 27 GENIC homozygous 58218941 3 144102379 144102380 G A 17 GENIC homozygous 58218943 3 144102437 144102438 G A 29 GENIC homozygous 58218945 3 144102529 144102530 A G 22 GENIC homozygous 58218947 3 144102653 144102654 A G 21 GENIC homozygous 58218949 3 144103032 144103033 G T 22 GENIC homozygous 58218951 3 144103148 144103149 G A 24 GENIC homozygous 58218953 3 144103192 144103193 A G 21 GENIC homozygous 58218955 3 144103722 144103723 A G 27 GENIC homozygous 57712778 3 144103774 144103775 C A 30 GENIC homozygous 58218957 3 144103785 144103786 C G 30 GENIC homozygous 58218959 3 144103859 144103860 A C 34 GENIC homozygous 57712779 3 144103872 144103873 A C 33 GENIC homozygous 58218961 3 144103963 144103964 G C 20 GENIC homozygous 58218963 3 144104860 144104861 A AT 8 GENIC heterozygous 58218983 3 144109794 144109795 C T 26 GENIC homozygous 58219011 3 144109912 144109913 T A 34 GENIC homozygous 58219013 3 144110109 144110110 G A 25 GENIC homozygous 58219015 3 144110225 144110340 AAGAAGCCAGTTTGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGGAAGCACAAGGCCCTGGGTTCGGTCCCCAGCTCCCAAAAAAAGAAACAAAAAAAAAAAAAA ------------------------------------------------------------------------------------------------------------------- 7 GENIC homozygous 58561743 3 144110468 144110469 G A 22 GENIC homozygous 58219017 3 144111331 144111332 T C 29 GENIC homozygous 58219019 3 144111895 144111896 T C 34 GENIC homozygous 58219021 3 144112088 144112089 C T 22 GENIC homozygous 58219023 3 144112480 144112481 T C 19 GENIC homozygous 58219025 3 144112986 144112987 A T 13 GENIC homozygous 58219027 3 144113840 144113844 CATT ---- 28 GENIC homozygous 58219029 3 144113976 144113977 G A 23 GENIC homozygous 57712798 3 144114383 144114384 C T 25 GENIC homozygous 58219031 3 144114552 144114553 G A 15 GENIC homozygous 58039030 3 144090774 144090775 G GT 15 GENIC homozygous 58626833 3 144090775 144090776 G GT 11 GENIC homozygous 58626834 3 144083626 144083627 A AAAAG 8 GENIC homozygous 59519047 3 144086242 144086246 TGTG ---- 9 GENIC heterozygous 59519049 3 144114599 144114600 A AG 12 GENIC possibly homozygous 59519051 3 144114602 144114603 A AGGG 12 GENIC possibly homozygous 59519053 3 144114606 144114607 A AAGGGAGGG 12 GENIC possibly homozygous 59519055 3 144114634 144114635 G GAGGA 8 GENIC homozygous 59519057 3 144114966 144114967 G GT 22 GENIC homozygous 58219042 3 144115412 144115413 T G 44 GENIC homozygous 58219044 3 144115645 144115646 T C 17 GENIC homozygous 57712808 3 144116249 144116250 C A 12 GENIC homozygous 58219046 3 144116312 144116313 C T 10 GENIC homozygous 57712809 3 144116493 144116494 A G 16 GENIC homozygous 58219048 3 144116733 144116734 T A 12 GENIC homozygous 58219050 3 144116741 144116742 G GTT 13 GENIC homozygous 58219052 3 144118078 144118079 G T 26 GENIC homozygous 57712812 3 144118726 144118727 T C 26 GENIC homozygous 57712813 3 144120338 144120339 C G 28 GENIC homozygous 57712814 3 144120443 144120444 A G 25 GENIC homozygous 57712815 3 144120900 144120901 A G 24 GENIC homozygous 57712816 3 144121217 144121218 G A 20 GENIC homozygous 57712817 3 144121456 144121464 ATACATAC -------- 9 GENIC homozygous 58626838 3 144121752 144121753 C CTAA 25 GENIC homozygous 57712820 3 144122531 144122532 C G 31 GENIC homozygous 57712822 3 144122708 144122709 C T 22 GENIC homozygous 57712824 3 144122911 144122912 G T 23 GENIC homozygous 57712825 3 144122923 144122924 T C 22 GENIC homozygous 57712826 3 144122938 144122939 C G 22 GENIC homozygous 58219054 3 144123099 144123100 G A 23 GENIC homozygous 58219056 3 144123150 144123151 G A 26 GENIC homozygous 58219058 3 144123502 144123503 C CACACACACAGAG 14 GENIC possibly homozygous 58219062 3 144123908 144123909 G GA 4 GENIC homozygous 57712831 3 144123992 144123993 A - 10 GENIC homozygous 58219064 3 144125818 144125819 C T 30 GENIC homozygous 58219066 3 144126023 144126024 T C 26 GENIC homozygous 58219068 3 144126075 144126076 A C 35 GENIC homozygous 57712832 3 144126128 144126129 G A 35 GENIC homozygous 58219070 3 144126660 144126661 G A 30 GENIC homozygous 58219072 3 144126970 144126971 C T 10 GENIC homozygous 58219074 3 144126999 144127000 T TATAC 7 GENIC homozygous 58219076 3 144127306 144127307 A G 21 GENIC homozygous 58219078 3 144127455 144127456 G A 15 GENIC homozygous 58219080 3 144127820 144127821 A T 14 GENIC homozygous 58219082 3 144128752 144128753 A - 24 GENIC homozygous 58219084 3 144129288 144129289 T A 18 GENIC homozygous 58219086 3 144129770 144129771 A G 42 GENIC homozygous 58219088 3 144130987 144130988 G A 30 GENIC homozygous 58219090 3 144135509 144135510 T C 17 GENIC homozygous 57712848 3 144135730 144135731 G A 16 GENIC homozygous 57712850 3 144135738 144135739 C - 15 GENIC homozygous 57712851 3 144135742 144135743 G A 15 GENIC homozygous 58626841 3 144135753 144135754 T TAGAGTCAGGTATGGTGAGGTGGAAGGGGGTGCCTCAGAGGGCCCATGCGTAGGCATCTCTTCCCCTTGACGTACCAGCCATACAACAG 15 GENIC homozygous 58626842 3 144135869 144135871 TT -- 14 GENIC heterozygous 58626844 3 144151611 144151612 T G 10 GENIC homozygous 57712905 3 144135878 144135884 GGGTCA ------ 10 GENIC heterozygous 58626845 3 144144933 144144934 C G 25 GENIC homozygous 58219094 3 144149576 144149577 G A 31 GENIC homozygous 57712896 3 144151459 144151460 G GT 14 GENIC possibly homozygous 57712901 3 144152613 144152614 G A 16 GENIC homozygous 58219096 3 144155061 144155062 C A 19 GENIC homozygous 57712913 3 144155705 144155706 G A 25 GENIC homozygous 58219098 3 144156108 144156109 A T 32 GENIC homozygous 58626846 3 144156110 144156111 T TC 32 GENIC homozygous 58626847 3 144156179 144156180 G GA 26 GENIC homozygous 58219100 3 144156241 144156242 T - 24 GENIC homozygous 58626848 3 144156243 144156244 C - 24 GENIC homozygous 58626849 3 144156246 144156247 T - 25 GENIC homozygous 58626850 3 144156247 144156248 A ACAT 26 GENIC homozygous 58626851 3 144156266 144156267 T - 25 GENIC homozygous 57712923 3 144157760 144157761 T TAC 22 GENIC homozygous 57712927 3 144159428 144159429 G T 15 GENIC homozygous 58219102 3 144174853 144174854 C T 23 GENIC homozygous 58219112 3 144174947 144174948 C T 29 GENIC homozygous 58219114 3 144175070 144175071 C CTTGTTGTTGTTG 15 GENIC homozygous 57712937 3 144176535 144176537 AA -- 14 GENIC heterozygous 57712944 3 144176536 144176537 A - 14 GENIC heterozygous 57712945 3 144179721 144179733 ACACACACACAC ------------ 5 GENIC heterozygous 59333227 3 144179723 144179733 ACACACACAC ---------- 5 GENIC heterozygous 58903325 3 144184407 144184408 A - 26 GENIC homozygous 57712961 3 144186565 144186566 C T 30 GENIC homozygous 58219120 3 144187843 144187844 A T 10 GENIC heterozygous 57712990 3 144190129 144190131 AA -- 29 GENIC homozygous 58219140 3 144192615 144192616 A T 22 GENIC homozygous 58219142 3 144192620 144192621 T C 23 GENIC homozygous 57713005 3 144193671 144193679 CACACACA -------- 5 GENIC heterozygous 58626854 3 144193675 144193679 CACA ---- 5 GENIC heterozygous 58672704 3 144195166 144195167 A G 22 GENIC homozygous 57713015 3 144195224 144195225 G A 26 GENIC homozygous 58219144 3 144197543 144197544 C CACACACACACAGAG 22 GENIC possibly homozygous 59519060 3 144198497 144198498 C CA 24 GENIC possibly homozygous 58219146 3 144199698 144199699 C T 22 GENIC homozygous 58219150 3 144200114 144200115 T A 24 GENIC homozygous 57713035 3 144205723 144205724 G A 19 GENIC homozygous 58219152 3 144207591 144207592 C T 28 GENIC homozygous 58219154 3 144207610 144207611 C T 28 GENIC homozygous 58219156 3 144207859 144207860 G A 33 GENIC homozygous 57713057 3 144207870 144207871 A T 33 GENIC homozygous 57713058 3 144207888 144207889 T - 26 GENIC homozygous 57713059 3 144207906 144207907 G T 25 GENIC homozygous 57713060 3 144207919 144207920 G C 21 GENIC homozygous 57713061 3 144207928 144207929 G C 19 GENIC homozygous 57713062 3 144207947 144207948 T A 17 GENIC homozygous 57713063 3 144207954 144207955 G C 18 GENIC homozygous 57713064 3 144208005 144208006 A C 22 GENIC homozygous 58039042 3 144208006 144208007 G A 22 GENIC homozygous 58039043 3 144208017 144208018 G C 21 GENIC homozygous 57713065 3 144208025 144208026 G C 19 GENIC homozygous 57713066 3 144208043 144208044 A C 26 GENIC homozygous 57713067 3 144208055 144208056 C A 28 GENIC homozygous 57713068 3 144208075 144208076 G C 30 GENIC homozygous 57713069 3 144208122 144208123 C T 25 GENIC homozygous 57713070 3 144208158 144208159 A T 16 GENIC homozygous 57713071 3 144209240 144209241 G A 30 GENIC homozygous 58219166 3 144209682 144209683 T TC 5 GENIC heterozygous 59519062 3 144209693 144209694 A C 10 GENIC homozygous 59519064 3 144210503 144210504 C T 30 GENIC homozygous 57713082 3 144210996 144210997 T C 4 GENIC heterozygous 57713084 3 144211008 144211009 T C 4 GENIC heterozygous 58219174 3 144211127 144211128 G GTC 7 GENIC homozygous 58219176 3 144211173 144211174 C CTG 11 GENIC homozygous 58219178 3 144211222 144211223 C T 26 GENIC homozygous 58219180 3 144213142 144213145 AAA --- 10 GENIC heterozygous 58039044 3 144213143 144213145 AA -- 10 GENIC heterozygous 57713086 3 144213144 144213145 A - 10 GENIC heterozygous 57713087 3 144215261 144215275 TCTGTGTGTGTGTG -------------- 8 GENIC homozygous 58219182 3 144215822 144215823 A G 34 GENIC homozygous 58219184 3 144216277 144216278 A C 16 GENIC homozygous 58219186 3 144216737 144216738 G T 27 GENIC homozygous 58219188 3 144217515 144217516 C T 32 GENIC homozygous 58219190 3 144218441 144218442 G T 38 GENIC homozygous 58219192 3 144218777 144218778 C T 28 GENIC homozygous 58219194 3 144219165 144219166 A G 14 GENIC homozygous 57713094 3 144221915 144221917 GT -- 16 GENIC homozygous 57713099 3 144221962 144221963 C - 8 GENIC heterozygous 57713100 3 144221963 144221966 CAA --- 8 GENIC heterozygous 57713102 3 144221990 144221991 G - 8 GENIC homozygous 57713103 3 144222007 144222008 A C 8 GENIC homozygous 59519066 3 144222019 144222021 CG -- 2 GENIC homozygous 59333231 3 144222448 144222449 G A 28 GENIC homozygous 58219196 3 144224043 144224044 G - 16 GENIC homozygous 57713112 3 144225461 144225465 CACA ---- 21 GENIC homozygous 58219198 3 144225496 144225500 GTGT ---- 14 GENIC possibly homozygous 57713118 3 144225562 144225563 C A 16 GENIC heterozygous 58397775 3 144226897 144226901 ATAC ---- 8 GENIC homozygous 59519068 3 144227407 144227408 A G 20 GENIC homozygous 57713124 3 144227974 144227975 G A 12 GENIC homozygous 57713127 3 144230189 144230190 T TG 14 GENIC homozygous 57713131 3 144230967 144230968 T C 22 GENIC homozygous 58219204 3 144231650 144231651 C T 22 GENIC homozygous 58219206 3 144232044 144232046 AA -- 21 GENIC heterozygous 57713133 3 144232099 144232103 GTGT ---- 8 GENIC heterozygous 59519070 3 144233992 144233993 G GTTC 39 GENIC homozygous 57713140 3 144234597 144234598 A G 18 GENIC homozygous 57713145 3 144234916 144234917 A G 23 GENIC homozygous 57713147 3 144235060 144235061 C T 22 GENIC homozygous 58219208 3 144240922 144240923 A G 15 GENIC homozygous 58219222 3 144238557 144238560 AAA --- 16 GENIC homozygous 58219210 3 144238864 144238865 T A 20 GENIC homozygous 58219212 3 144238928 144238934 TCTTCC ------ 3 GENIC homozygous 59519072 3 144238975 144238976 T C 8 GENIC homozygous 58219216 3 144240518 144240519 A G 20 GENIC homozygous 58219220 3 144240990 144240991 C CA 16 GENIC homozygous 58219224 3 144241226 144241228 AC -- 16 GENIC homozygous 58039045 3 144241238 144241239 A ATGTGTG 10 GENIC heterozygous 57713159 3 144241238 144241239 A ATGTG 10 GENIC possibly homozygous 57713160 3 144241684 144241685 T C 10 GENIC homozygous 57713162 3 144242660 144242661 G GTTTT 12 GENIC possibly homozygous 58219226 3 144243257 144243258 A G 19 GENIC homozygous 58219230 3 144244659 144244660 G A 21 GENIC homozygous 58219232 3 144244759 144244760 C A 22 GENIC homozygous 58219234 3 144245107 144245115 CACACACA -------- 9 GENIC homozygous 58219236 3 144245385 144245386 A G 11 GENIC homozygous 57713167 3 144245459 144245460 G - 2 GENIC homozygous 57713172 3 144245400 144245401 G A 7 GENIC homozygous 57713168 3 144245406 144245407 C T 6 GENIC homozygous 58219238 3 144245427 144245428 C CCG 3 GENIC homozygous 57713170 3 144245469 144245470 C - 3 GENIC homozygous 57713174 3 144245472 144245473 G - 3 GENIC homozygous 57713175 3 144245482 144245483 A - 4 GENIC homozygous 57713176 3 144245828 144245829 A G 6 GENIC homozygous 58219240 3 144246318 144246319 G A 16 GENIC homozygous 58219242 3 144247490 144247491 C - 6 GENIC homozygous 58626875 3 144248961 144248962 G T 16 GENIC homozygous 58219258 3 144250001 144250003 AA -- 28 GENIC heterozygous 58626876 3 144250005 144250007 AA -- 27 GENIC heterozygous 58626877 3 144251109 144251110 A C 15 GENIC homozygous 58219272 3 144252233 144252234 T - 7 GENIC homozygous 57713200 3 144252236 144252239 AAT --- 7 GENIC homozygous 58039056 3 144252259 144252260 A G 10 GENIC homozygous 58219282 3 144252263 144252264 A G 15 GENIC homozygous 57713201 3 144252987 144252988 T C 21 GENIC homozygous 58219284 3 144254054 144254055 G A 27 GENIC homozygous 58219286 3 144254245 144254246 G A 14 GENIC homozygous 58219288 3 144254498 144254499 T C 15 GENIC homozygous 58219290 3 144254525 144254526 G A 16 GENIC homozygous 58219292 3 144254676 144254677 C CACTAG 24 GENIC homozygous 58219294 3 144255202 144255203 A T 24 GENIC homozygous 58219298 3 144256488 144256510 GTGTGCGTGTGTGTGTGTGTGT ---------------------- 16 GENIC heterozygous 59519074 3 144256490 144256510 GTGCGTGTGTGTGTGTGTGT -------------------- 16 GENIC heterozygous 59519076 3 144256729 144256730 A AT 21 GENIC homozygous 57713207 3 144257334 144257335 G A 24 GENIC homozygous 58219300 3 144257968 144257969 A ATT 12 GENIC homozygous 58219302 3 144257994 144257995 G GAGAAAGAAAGAAAGAAAGAAAGAA 11 GENIC homozygous 59519078 3 144258113 144258114 A G 28 GENIC homozygous 57713209 3 144258129 144258130 T - 24 GENIC homozygous 58219311 3 144258479 144258480 A ACACACC 8 GENIC heterozygous 58653239 3 144258479 144258480 A ACACACACC 8 GENIC heterozygous 58626882 3 144259249 144259250 G A 22 GENIC homozygous 58219315 3 144259591 144259592 T C 19 GENIC homozygous 57713211 3 144260288 144260289 T C 20 GENIC homozygous 58219317 3 144262160 144262161 G - 25 GENIC homozygous 57713216 3 144263809 144263810 T TGCAGTGGGGTTGACTGTAAACGCCACCAG 15 GENIC homozygous 59049257 3 144272123 144272124 G GT 14 GENIC heterozygous 59333236 3 144272124 144272125 T - 14 GENIC heterozygous 57713219 3 144281807 144281808 A - 6 GENIC heterozygous 58219321 3 144297712 144297713 C A 17 GENIC homozygous 58219323 3 144299712 144299716 TGTG ---- 1 GENIC homozygous 59519080 3 144319406 144319408 AG -- 6 GENIC heterozygous 59519082 3 144319456 144319458 GA -- 13 GENIC heterozygous 58626892 3 144320115 144320116 G GATAACTAACATTAAAGGCCTTTTAA 28 GENIC homozygous 57713322 3 144343345 144343348 ATA --- 4 GENIC homozygous 59238329 3 144345936 144345938 AA -- 12 GENIC heterozygous 58626895 3 144345937 144345938 A - 12 GENIC heterozygous 58626896 3 144355137 144355138 C CAGAT 6 GENIC heterozygous 58039066