chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 145031639 145031640 C CAGACGG 30 GENIC homozygous 57715134 3 145031640 145031641 T TTGTGTGC 31 GENIC homozygous 57715135 3 145033607 145033618 AAGACAAAAAC ----------- 38 GENIC homozygous 57715136 3 145034536 145034544 AATAAATA -------- 16 GENIC homozygous 59049448 3 145035036 145035037 T C 40 GENIC homozygous 59049450 3 145036243 145036244 G GA 13 GENIC heterozygous 58627099 3 145036713 145036714 C CT 31 GENIC homozygous 57715141 3 145036895 145036896 T C 40 GENIC homozygous 57715142 3 145039318 145039322 GTGT ---- 6 GENIC heterozygous 58953386 3 145040040 145040041 A G 33 GENIC homozygous 57715143 3 145040367 145040368 T C 38 GENIC homozygous 57715144 3 145042444 145042445 T TA 11 GENIC heterozygous 57715154 3 145046159 145046169 TTTTTTTTTT ---------- 5 INTERGENIC homozygous 59049452 3 145046186 145046187 C CTT 15 INTERGENIC homozygous 57715155 3 145046423 145046424 C G 21 INTERGENIC homozygous 57715156 3 145046562 145046563 T TA 4 INTERGENIC homozygous 57715158 3 145046564 145046565 T TTA 4 INTERGENIC homozygous 57715159 3 145047763 145047764 C CTT 13 INTERGENIC homozygous 57715160 3 145047989 145047990 G GGTGTGTGTGTGTGTGT 12 INTERGENIC homozygous 59049454 3 145048143 145048144 G A 27 INTERGENIC homozygous 57715162 3 145048557 145048558 G A 25 INTERGENIC homozygous 57715163 3 145049535 145049536 C CAAAAAAAAAA 9 INTERGENIC heterozygous 58627104 3 145049535 145049536 C CA 9 INTERGENIC heterozygous 59049456 3 145053124 145053125 T C 37 INTERGENIC homozygous 57715166 3 145054321 145054322 C CACACACACAG 11 INTERGENIC homozygous 59049458 3 145054430 145054432 AC -- 16 INTERGENIC homozygous 57715172 3 145042444 145042445 T TAA 11 GENIC heterozygous 58653283 3 145055848 145055849 A T 39 GENIC homozygous 57715174 3 145056154 145056156 TT -- 17 GENIC heterozygous 57715175 3 145056155 145056156 T - 17 GENIC heterozygous 59049460 3 145057218 145057219 G GA 15 GENIC homozygous 57715176 3 145057866 145057867 T A 40 GENIC homozygous 57715177 3 145058088 145058089 G A 34 GENIC homozygous 57715178 3 145059678 145059688 GTGTGTGTGT ---------- 9 GENIC homozygous 58627108 3 145054464 145054476 ACACACACACAG ------------ 12 GENIC possibly homozygous 58752061 3 145059893 145059894 C T 26 GENIC homozygous 57715180 3 145060364 145060366 TT -- 25 GENIC heterozygous 58220368 3 145060365 145060366 T - 25 GENIC heterozygous 57715181 3 145060883 145060899 ACCAACCAACCGACCA ---------------- 16 GENIC homozygous 57715182 3 145060941 145060942 C A 27 GENIC homozygous 57715185 3 145062798 145062799 A T 28 GENIC homozygous 57715186 3 145063793 145063794 A G 33 GENIC homozygous 57715187 3 145066227 145066228 G A 34 GENIC homozygous 57715188 3 145066409 145066410 G T 38 GENIC homozygous 57715189 3 145068539 145068540 C CACAT 21 GENIC possibly homozygous 57715193 3 145068637 145068638 G A 24 GENIC homozygous 57715194 3 145070413 145070418 TTTTT ----- 10 GENIC heterozygous 58627111 3 145070414 145070418 TTTT ---- 10 GENIC heterozygous 58627112 3 145070415 145070418 TTT --- 10 GENIC heterozygous 58672736 3 145070933 145070934 T C 34 GENIC homozygous 57715197 3 145071031 145071033 TG -- 5 GENIC homozygous 57715198 3 145071577 145071578 A C 29 GENIC homozygous 57715199 3 145085461 145085462 A - 12 GENIC possibly homozygous 57715200 3 145086942 145086943 T C 8 GENIC homozygous 57715202 3 145087103 145087104 T G 11 GENIC homozygous 57715203 3 145087278 145087279 C T 10 GENIC homozygous 57715204 3 145087301 145087302 G C 11 GENIC homozygous 57715205 3 145087320 145087321 C CA 10 GENIC homozygous 57715206 3 145087324 145087325 C T 10 GENIC homozygous 57715207 3 145089180 145089181 C - 28 GENIC possibly homozygous 57715210 3 145089266 145089267 A G 24 GENIC possibly homozygous 57715211 3 145089400 145089401 T C 25 GENIC homozygous 57715212 3 145089409 145089410 A T 21 GENIC homozygous 57715213 3 145090221 145090222 G A 20 GENIC homozygous 57715214 3 145091613 145091614 A C 23 GENIC homozygous 57715216 3 145091630 145091631 T TA 17 GENIC homozygous 57715217 3 145091761 145091762 T C 20 GENIC homozygous 57715218 3 145091996 145091997 C CA 6 GENIC heterozygous 59049464 3 145092074 145092075 C A 19 GENIC homozygous 57715219 3 145092494 145092498 TATT ---- 3 GENIC homozygous 58653287 3 145093247 145093249 GG -- 9 GENIC homozygous 57715221 3 145093425 145093426 A AGT 2 GENIC homozygous 58627115 3 145094130 145094131 A G 35 GENIC homozygous 57715222 3 145094515 145094516 T C 33 GENIC homozygous 57715223 3 145094577 145094578 A G 34 GENIC homozygous 57715224 3 145094823 145094824 T C 23 GENIC homozygous 57715225 3 145094850 145094851 T A 32 GENIC homozygous 57715226 3 145095153 145095154 C T 40 GENIC homozygous 57715227 3 145095279 145095280 C G 20 GENIC homozygous 57715228 3 145095735 145095736 A G 33 GENIC possibly homozygous 57715229 3 145096662 145096663 T C 38 GENIC homozygous 57715231 3 145096917 145096918 T C 35 GENIC possibly homozygous 57715232 3 145097021 145097026 TTTGG ----- 15 GENIC homozygous 57715233 3 145097754 145097755 G A 46 GENIC homozygous 57715234 3 145097981 145097983 TG -- 34 GENIC homozygous 58561788 3 145098746 145098747 G A 26 GENIC homozygous 57715235 3 145099091 145099092 G A 32 GENIC homozygous 57715236 3 145099337 145099338 G A 23 GENIC homozygous 57715237 3 145099386 145099387 G GT 18 GENIC homozygous 57715238 3 145099822 145099837 TGGTGAGGCATCCCA --------------- 25 GENIC homozygous 57715239 3 145100636 145100637 C CCTT 21 GENIC homozygous 57715240 3 145100945 145100946 T C 25 GENIC homozygous 57715241 3 145101478 145101479 G A 30 GENIC homozygous 57715242 3 145101830 145101831 A G 39 GENIC homozygous 57715243 3 145103075 145103076 T TACACACACACACAC 17 GENIC heterozygous 58627117 3 145103075 145103076 T TACACACACACACACACACAC 17 GENIC heterozygous 58627118 3 145103274 145103275 G A 37 GENIC homozygous 57715244 3 145103335 145103336 G A 21 GENIC homozygous 57715245 3 145103400 145103401 G - 18 GENIC homozygous 57715246 3 145103473 145103474 C CA 22 GENIC homozygous 57715247 3 145104237 145104238 C T 34 GENIC homozygous 57715248 3 145104278 145104279 A T 25 GENIC homozygous 57715249 3 145104566 145104567 A G 22 GENIC homozygous 57715250 3 145107830 145107831 A G 21 GENIC homozygous 57715251 3 145107860 145107861 T - 16 GENIC homozygous 58398299 3 145109180 145109181 T TCACACA 11 GENIC homozygous 58696996 3 145109803 145109805 AA -- 20 GENIC homozygous 57715252 3 145110766 145110767 C CT 16 GENIC possibly homozygous 57715253 3 145111319 145111320 T - 16 GENIC homozygous 57715254 3 145113433 145113434 A G 22 GENIC homozygous 57715256 3 145113664 145113665 A T 39 GENIC homozygous 57715257 3 145115139 145115140 A - 32 GENIC homozygous 57715258 3 145115840 145115841 C T 36 GENIC homozygous 57715259 3 145116337 145116338 T C 29 GENIC homozygous 57715260 3 145116531 145116533 GG -- 12 GENIC heterozygous 58627121 3 145116532 145116533 G - 12 GENIC heterozygous 59049466 3 145116885 145116894 TTTTCTTTT --------- 7 GENIC heterozygous 58398305 3 145116886 145116894 TTTCTTTT -------- 7 GENIC possibly homozygous 59049468 3 145120109 145120110 A AG 12 GENIC homozygous 58809849 3 145120186 145120187 T - 7 GENIC homozygous 59049470 3 145120345 145120346 A AT 5 GENIC homozygous 57715265 3 145121107 145121108 T G 24 GENIC homozygous 57715266 3 145121169 145121170 T C 16 GENIC homozygous 57715267 3 145121296 145121297 A T 34 GENIC homozygous 57715268 3 145121312 145121313 T G 27 GENIC homozygous 57715269 3 145122811 145122812 T G 24 GENIC homozygous 57715270 3 145124304 145124305 A G 39 GENIC homozygous 57715271 3 145125064 145125065 T C 44 GENIC homozygous 57715272 3 145125639 145125640 A G 25 GENIC homozygous 57715273 3 145125952 145125953 G A 28 GENIC possibly homozygous 57715274 3 145126580 145126581 T G 35 GENIC homozygous 57715275 3 145127440 145127441 G GT 17 GENIC homozygous 57715276 3 145128009 145128010 T C 43 GENIC homozygous 57715277 3 145128262 145128263 T A 22 GENIC homozygous 57715278 3 145129481 145129482 A G 31 GENIC homozygous 57715279 3 145129493 145129494 C T 34 GENIC homozygous 57715280 3 145129660 145129661 G A 29 GENIC homozygous 57715281 3 145068287 145068291 GGTG ---- 10 GENIC heterozygous 59333253 3 145077815 145077816 A - 6 GENIC homozygous 59333255 3 145077834 145077835 C CA 6 GENIC homozygous 59333257 3 145085922 145085923 T - 8 GENIC homozygous 59333259 3 145114459 145114460 T A 20 INTERGENIC homozygous 58995397 3 145114460 145114461 C T 20 INTERGENIC homozygous 58995399 3 145130080 145130081 C - 19 GENIC possibly homozygous 57715282 3 145130663 145130664 G - 35 GENIC heterozygous 57715287 3 145131492 145131493 C CTTTTTTTTT 14 INTERGENIC heterozygous 57715292 3 145131492 145131493 C CTTTTTTTTTTTT 14 INTERGENIC heterozygous 58653288 3 145131492 145131493 C CTTTTTTTTTT 14 INTERGENIC heterozygous 59049482 3 145131890 145131891 C T 24 GENIC homozygous 57715293 3 145132712 145132713 T A 33 GENIC homozygous 57715294 3 145133149 145133150 A G 30 GENIC homozygous 57715295 3 145133720 145133721 G A 23 GENIC homozygous 57715296 3 145136311 145136313 AC -- 15 GENIC homozygous 57715297 3 145136590 145136591 C CTGTGTGTGTGTGTGTGTGTGTGTGTG 11 GENIC homozygous 58627123 3 145137323 145137324 T C 20 GENIC homozygous 57715298 3 145137350 145137351 T TTTTTG 13 GENIC possibly homozygous 57715300 3 145137806 145137807 T C 23 GENIC homozygous 57715301 3 145137821 145137826 TTATC ----- 23 GENIC homozygous 57715302 3 145138149 145138150 T C 14 GENIC homozygous 57715303 3 145138435 145138436 C T 32 INTERGENIC homozygous 57715304 3 145138818 145138819 C T 35 INTERGENIC homozygous 57715305 3 145138863 145138883 AAAAAAAAAAAAAAGACTTT -------------------- 7 INTERGENIC heterozygous 59049484 3 145139303 145139304 T TGC 7 INTERGENIC possibly homozygous 59049486 3 145140018 145140019 G GTTTTT 10 INTERGENIC heterozygous 57715313 3 145140018 145140019 G GTTT 10 INTERGENIC heterozygous 57715314 3 145140018 145140019 G GTTTTTTT 10 INTERGENIC heterozygous 57715315 3 145140122 145140123 G A 31 INTERGENIC homozygous 57715317 3 145141430 145141437 AAAAAAA ------- 10 INTERGENIC homozygous 57715318 3 145141603 145141604 G A 27 INTERGENIC homozygous 57715319 3 145142205 145142206 T C 37 GENIC homozygous 57715320 3 145142512 145142513 C T 39 GENIC homozygous 57715321 3 145144079 145144080 A T 42 GENIC homozygous 57715322 3 145144603 145144604 A G 24 GENIC homozygous 57715323 3 145146599 145146600 A G 40 GENIC homozygous 57715324 3 145147605 145147606 A AT 41 GENIC homozygous 57715326 3 145149017 145149018 G GCCTCC 28 GENIC homozygous 57715343 3 145148199 145148203 TTTT ---- 20 GENIC heterozygous 58220458 3 145148200 145148203 TTT --- 20 GENIC heterozygous 57715341 3 145148201 145148203 TT -- 20 GENIC heterozygous 58653289 3 145149170 145149171 A - 23 GENIC homozygous 57715344 3 145149260 145149261 G GT 16 GENIC possibly homozygous 57715345 3 145149285 145149286 T TTGTGTG 17 GENIC homozygous 58672738 3 145149536 145149537 C T 21 GENIC homozygous 57715346 3 145150240 145150241 A AACTGCTAAGACTGAACCCACAGTGAACTAGTCTATGGGGGGAGGGCGGC 18 GENIC possibly homozygous 58627126 3 145150536 145150537 A ATATT 10 GENIC homozygous 57715347 3 145151884 145151885 A AGC 6 GENIC homozygous 58627127 3 145152226 145152227 T C 18 GENIC homozygous 57715350 3 145152263 145152279 TTATTTATTTATTTAT ---------------- 2 GENIC homozygous 59049488 3 145152391 145152392 G A 20 GENIC homozygous 57715351 3 145152594 145152595 C CT 7 GENIC homozygous 57715352 3 145152623 145152624 A G 12 GENIC homozygous 57715353 3 145153838 145153839 C CT 9 GENIC heterozygous 58653290 3 145153973 145153974 T G 21 GENIC homozygous 57715355 3 145154352 145154353 A AGTGTGTGTGTGTGT 13 GENIC homozygous 59049490 3 145155842 145155843 T C 29 GENIC homozygous 57715357 3 145156834 145156835 C T 33 GENIC homozygous 57715358 3 145158833 145158835 TT -- 22 GENIC homozygous 57715359 3 145159798 145159799 T C 43 GENIC homozygous 57715360 3 145164504 145164506 TC -- 57 GENIC homozygous 57715361 3 145164907 145164908 T A 27 GENIC homozygous 57715362 3 145165417 145165418 G A 34 GENIC homozygous 57715363 3 145167034 145167035 G A 17 GENIC homozygous 57715364 3 145167157 145167158 T C 27 GENIC homozygous 57715365 3 145167440 145167441 G GTCCCTC 19 GENIC homozygous 57715366 3 145167468 145167469 A C 31 GENIC homozygous 57715367 3 145167683 145167684 T C 29 GENIC homozygous 57715368 3 145167809 145167810 C G 24 GENIC homozygous 57715369 3 145168001 145168002 C T 28 GENIC homozygous 57715370 3 145168041 145168042 T C 29 GENIC homozygous 57715371 3 145168481 145168482 C T 37 GENIC homozygous 57715372 3 145168583 145168584 G A 36 GENIC homozygous 57715373 3 145168926 145168927 T - 17 GENIC homozygous 57715374 3 145169996 145169997 C T 24 GENIC homozygous 57715375 3 145170103 145170104 C T 30 GENIC homozygous 57715376 3 145171457 145171458 T G 26 GENIC homozygous 57715378 3 145171762 145171763 C T 23 GENIC homozygous 57715379 3 145171947 145171948 C A 34 GENIC homozygous 57715380 3 145172020 145172021 T C 22 GENIC homozygous 57715381 3 145172030 145172041 AAAAAAAAAAA ----------- 23 GENIC homozygous 57715382 3 145173297 145173298 C A 16 GENIC homozygous 57715385 3 145173498 145173499 G GATTC 25 GENIC homozygous 57715386 3 145173782 145173783 C T 33 GENIC homozygous 57715387 3 145174018 145174019 A G 28 GENIC homozygous 57715388 3 145174076 145174077 T C 24 GENIC homozygous 57715389 3 145174369 145174370 G GA 31 GENIC homozygous 57715390 3 145174585 145174586 C A 37 GENIC homozygous 57715391 3 145174774 145174775 C T 29 GENIC homozygous 57715392 3 145174788 145174789 C A 26 GENIC homozygous 57715393 3 145175135 145175136 A G 32 GENIC homozygous 57715395 3 145175237 145175238 A G 25 GENIC homozygous 57715396 3 145175935 145175936 A C 27 GENIC homozygous 57715397 3 145176226 145176227 T A 24 GENIC homozygous 57715398 3 145176351 145176352 C - 27 GENIC homozygous 57715399 3 145176455 145176456 G C 33 GENIC homozygous 57715400 3 145176521 145176522 G GAC 33 GENIC homozygous 57715401 3 145178713 145178714 T TCAGCGTCATGGATGTACCCACTTGCCTGTGTGTGTCCAGCGTCATGGATGTACTCACTTGACTGTGTGTGTC 2 GENIC homozygous 58561793 3 145180805 145180806 A G 16 GENIC homozygous 57715499 3 145180849 145180850 A C 16 GENIC homozygous 57715500 3 145180909 145180910 C G 18 GENIC homozygous 57715501 3 145181086 145181087 C T 15 GENIC homozygous 57715502 3 145181417 145181418 C A 27 GENIC homozygous 57715503 3 145181576 145181577 C T 31 GENIC homozygous 57715504 3 145181969 145181970 T A 27 GENIC homozygous 57715505 3 145182025 145182026 G T 23 GENIC homozygous 57715506 3 145182232 145182233 T C 31 GENIC homozygous 57715507 3 145183238 145183239 G A 29 GENIC homozygous 57715508 3 145183298 145183299 T TAAA 15 GENIC homozygous 57715509 3 145183332 145183335 TGT --- 13 GENIC homozygous 57715510 3 145183664 145183665 G A 20 GENIC homozygous 57715511 3 145183684 145183685 C T 15 GENIC homozygous 57715512 3 145184003 145184004 A - 15 GENIC heterozygous 58039182 3 145184128 145184129 C T 17 GENIC homozygous 57715513 3 145185530 145185531 G A 26 GENIC homozygous 57715516 3 145186239 145186240 A T 34 GENIC homozygous 57715517 3 145186639 145186640 C A 33 GENIC homozygous 57715518 3 145186846 145186847 G A 30 GENIC homozygous 57715520 3 145186917 145186918 A T 21 INTERGENIC heterozygous 58398390 3 145187236 145187237 T G 25 INTERGENIC homozygous 58995413 3 145187237 145187238 G A 25 INTERGENIC homozygous 58995415 3 145187352 145187353 T C 23 INTERGENIC homozygous 57715521 3 145194067 145194068 A G 17 INTERGENIC homozygous 57715522 3 145194332 145194333 A - 7 INTERGENIC possibly homozygous 59049492 3 145194364 145194365 C A 15 INTERGENIC homozygous 57715524 3 145194378 145194379 T - 10 INTERGENIC homozygous 57715527 3 145194707 145194726 AAAAAAAAAAAAAAAAAAA ------------------- 10 INTERGENIC heterozygous 57715528 3 145194741 145194742 T G 15 INTERGENIC homozygous 57715529 3 145195235 145195236 G A 38 GENIC homozygous 58995417 3 145195236 145195237 A C 38 GENIC homozygous 57715530 3 145196064 145196065 C T 41 GENIC homozygous 57715531 3 145196730 145196731 T - 41 INTERGENIC homozygous 57715532 3 145198120 145198121 A AT 35 INTERGENIC homozygous 57715533 3 145198344 145198349 ATTTT ----- 18 INTERGENIC homozygous 57715534 3 145198398 145198399 A G 8 INTERGENIC homozygous 57715535 3 145198431 145198432 T TC 5 INTERGENIC homozygous 57715536 3 145198433 145198434 A G 6 INTERGENIC homozygous 58561796 3 145198441 145198442 A C 5 INTERGENIC homozygous 57715538 3 145198447 145198448 G GA 4 INTERGENIC homozygous 57715539 3 145198452 145198453 A AC 6 INTERGENIC homozygous 57715540 3 145198454 145198455 C CA 6 INTERGENIC homozygous 57715541 3 145198464 145198465 A AG 14 INTERGENIC homozygous 57715542 3 145198519 145198520 G A 29 INTERGENIC homozygous 57715543 3 145198781 145198782 G C 21 INTERGENIC homozygous 57715544 3 145198805 145198806 G GT 5 INTERGENIC heterozygous 58696997