chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 176586039 176586040 C T 22 INTERGENIC homozygous 57811694 3 176586163 176586164 G A 13 INTERGENIC homozygous 57811696 3 176586193 176586194 A G 12 INTERGENIC homozygous 57811698 3 176586247 176586248 G T 17 INTERGENIC homozygous 57811700 3 176586281 176586282 G T 20 INTERGENIC homozygous 57811702 3 176586445 176586446 A G 16 INTERGENIC homozygous 57811704 3 176586593 176586599 ACACAA ------ 9 INTERGENIC heterozygous 57811706 3 176586593 176586594 A G 6 INTERGENIC heterozygous 58634083 3 176586595 176586599 ACAA ---- 9 INTERGENIC heterozygous 57811708 3 176586775 176586776 T G 21 INTERGENIC homozygous 57811710 3 176587128 176587129 C T 21 INTERGENIC homozygous 57811712 3 176587130 176587131 C CA 21 INTERGENIC homozygous 57811714 3 176587244 176587245 A T 19 INTERGENIC homozygous 57811716 3 176587255 176587256 A T 18 INTERGENIC homozygous 57811718 3 176587406 176587407 A G 15 INTERGENIC homozygous 57811720 3 176587470 176587471 T C 27 INTERGENIC homozygous 57811722 3 176587471 176587472 G A 27 INTERGENIC homozygous 57811724 3 176590013 176590014 A G 10 INTERGENIC homozygous 57811726 3 176590132 176590133 T C 17 INTERGENIC homozygous 57811728 3 176590210 176590214 CCCC ---- 7 INTERGENIC homozygous 57811730 3 176590283 176590284 T A 13 INTERGENIC homozygous 57811732 3 176590368 176590369 T G 14 INTERGENIC homozygous 57811734 3 176590647 176590648 A G 15 INTERGENIC homozygous 57811736 3 176590754 176590755 A C 22 INTERGENIC homozygous 57811738 3 176590769 176590824 TGTAGTCTGCCTGTAGTCTGCCTGTAGTCCTCCTGTAGTCCTTCTGTAGTCTACG ------------------------------------------------------- 32 INTERGENIC homozygous 58565767 3 176590995 176590996 C T 24 INTERGENIC homozygous 57811752 3 176591371 176591372 A G 23 INTERGENIC homozygous 57811754 3 176591790 176591791 G C 26 INTERGENIC homozygous 57811756 3 176591791 176591792 T C 26 INTERGENIC homozygous 57811758 3 176591913 176591925 CACACACACACA ------------ 3 INTERGENIC homozygous 58634084 3 176591960 176591966 ACCAAC ------ 12 INTERGENIC homozygous 57811762 3 176592277 176592283 ACCAAC ------ 5 INTERGENIC homozygous 58674166 3 176592499 176592500 T C 12 INTERGENIC homozygous 57811764 3 176593024 176593025 T A 17 INTERGENIC homozygous 57811766 3 176593182 176593188 TGTGTG ------ 24 INTERGENIC possibly homozygous 57811768 3 176593263 176593269 GTGTAA ------ 24 INTERGENIC homozygous 57811770 3 176593352 176593353 G GT 20 INTERGENIC homozygous 57811772 3 176593353 176593354 G GT 20 INTERGENIC homozygous 57811776 3 176593418 176593419 A G 24 INTERGENIC homozygous 57811778 3 176593494 176593495 T C 18 INTERGENIC homozygous 57811780 3 176593495 176593496 G A 18 INTERGENIC homozygous 57811782 3 176593694 176593695 T TACACACACACAC 9 INTERGENIC homozygous 58565768 3 176593744 176593745 C G 14 INTERGENIC homozygous 57811788 3 176593946 176593947 A AAAAAAAAAAAAAAAAAAG 5 INTERGENIC heterozygous 58634085 3 176593978 176593979 A G 9 INTERGENIC homozygous 57811792 3 176594002 176594003 G A 10 INTERGENIC homozygous 57811794 3 176594438 176594439 T C 16 INTERGENIC homozygous 57811796 3 176594460 176594461 A ACCTTGGCACATGGATGCAAGG 14 INTERGENIC homozygous 57811798 3 176594563 176594564 A C 23 INTERGENIC homozygous 57811800 3 176594634 176594635 G A 10 INTERGENIC homozygous 57811802 3 176594956 176594957 C T 5 INTERGENIC homozygous 57811804 3 176595001 176595006 TCTCT ----- 4 INTERGENIC homozygous 58634086 3 176595048 176595058 TCTCTCTCTG ---------- 9 INTERGENIC homozygous 57811810 3 176595107 176595139 CTGTCTCTCTCTCTCCCTCTCCCTGTCTCTCT -------------------------------- 7 INTERGENIC heterozygous 58634087 3 176595109 176595139 GTCTCTCTCTCTCCCTCTCCCTGTCTCTCT ------------------------------ 7 INTERGENIC heterozygous 58634088 3 176595169 176595170 C G 12 INTERGENIC heterozygous 57811818 3 176595729 176595730 A ATCC 15 INTERGENIC homozygous 57811820 3 176595779 176595780 A C 16 INTERGENIC homozygous 57811822 3 176597057 176597058 A G 18 INTERGENIC homozygous 57811824 3 176597622 176597623 T C 7 INTERGENIC homozygous 57811826 3 176597929 176597930 G GTAAATAAATAAATAAATAAA 1 INTERGENIC homozygous 58634089 3 176598353 176598354 G A 14 INTERGENIC homozygous 57811830 3 176598492 176598494 CA -- 17 INTERGENIC homozygous 58253978 3 176598612 176598613 T C 28 INTERGENIC homozygous 57811832 3 176598716 176598717 A G 16 INTERGENIC homozygous 57811834 3 176598827 176598828 A AAGAG 8 INTERGENIC homozygous 58661007 3 176598918 176598919 A AATACAGTCCT 12 INTERGENIC homozygous 57811836 3 176599001 176599004 CCT --- 14 INTERGENIC homozygous 57811840 3 176599357 176599358 T A 18 INTERGENIC homozygous 57811842 3 176599622 176599636 TGTCTATGTGTAAA -------------- 34 INTERGENIC homozygous 57811844 3 176599937 176599938 A G 39 INTERGENIC homozygous 57811852 3 176600057 176600058 T G 19 INTERGENIC homozygous 57811854 3 176601176 176601188 AAAACAAAAACA ------------ 9 INTERGENIC homozygous 58634090 3 176601477 176601478 T TA 2 INTERGENIC homozygous 57811858 3 176602450 176602451 G A 12 INTERGENIC homozygous 57811860 3 176602460 176602461 G C 13 INTERGENIC homozygous 57811862 3 176602663 176602675 GTTGTTGTCGTC ------------ 7 INTERGENIC homozygous 57811864 3 176603043 176603044 G C 19 INTERGENIC homozygous 58050308 3 176603574 176603575 G T 15 INTERGENIC homozygous 57811868 3 176603650 176603651 G T 15 INTERGENIC homozygous 57811870 3 176603963 176603964 A AG 9 INTERGENIC homozygous 57811872 3 176604350 176604369 CACGGCATGAATAGGTTTC ------------------- 9 INTERGENIC homozygous 58565771 3 176604978 176604979 C T 24 INTERGENIC homozygous 57811874 3 176605925 176605926 G GGAAGAA 15 INTERGENIC heterozygous 58634092 3 176605216 176605217 T C 15 INTERGENIC homozygous 57811876 3 176605811 176605812 G GGAGGAAGAGGAAGAGGAGGAGGAAGAAGAGGAGGAAGAAAAAGGAGAAGAAGGAGAAGGAGGAGGAGAAGGAGAAGGAGGAGAA 3 INTERGENIC homozygous 58634091 3 176605838 176605839 A G 5 INTERGENIC homozygous 57811892 3 176606420 176606421 T C 15 INTERGENIC homozygous 57811904 3 176607771 176607772 A G 10 INTERGENIC homozygous 57811912 3 176608866 176608867 A AG 12 INTERGENIC homozygous 57811914 3 176609086 176609087 G A 16 INTERGENIC homozygous 57811916 3 176609855 176609873 CACACACACACACACACA ------------------ 8 INTERGENIC homozygous 58634093 3 176609928 176609929 A G 16 INTERGENIC homozygous 57811920 3 176610862 176610863 G GCA 14 INTERGENIC possibly homozygous 57811924 3 176611387 176611388 A G 13 INTERGENIC homozygous 57811926 3 176611436 176611437 G A 20 INTERGENIC homozygous 57811928 3 176611662 176611663 G GA 10 INTERGENIC heterozygous 57811930 3 176612974 176612975 C T 22 INTERGENIC homozygous 57811932 3 176613517 176613518 C CTCTCTCTCTT 10 INTERGENIC possibly homozygous 58634094 3 176613677 176613678 A G 23 INTERGENIC homozygous 57811936 3 176614156 176614157 G GAC 23 INTERGENIC possibly homozygous 57811938 3 176614160 176614161 G C 21 INTERGENIC possibly homozygous 58634095 3 176614180 176614181 G C 18 INTERGENIC homozygous 57811940 3 176614197 176614198 A AAAGAAAGG 16 INTERGENIC homozygous 58634096 3 176614207 176614208 A AG 7 INTERGENIC homozygous 58634097 3 176614209 176614210 A AAGG 14 INTERGENIC homozygous 58634098 3 176614417 176614418 G A 28 INTERGENIC homozygous 57811952 3 176614738 176614739 C T 20 INTERGENIC homozygous 57811954 3 176615197 176615198 A G 20 INTERGENIC homozygous 57811956 3 176615531 176615532 G A 25 INTERGENIC homozygous 57811958 3 176615596 176615597 T C 21 INTERGENIC homozygous 57811959 3 176615629 176615630 G C 25 INTERGENIC homozygous 57811961 3 176616173 176616174 T G 20 INTERGENIC homozygous 57811963 3 176616738 176616739 C T 31 INTERGENIC homozygous 57811965 3 176617131 176617132 C T 32 INTERGENIC homozygous 57811967 3 176617297 176617298 T C 31 INTERGENIC homozygous 57811969 3 176617387 176617388 C T 42 INTERGENIC homozygous 57811971 3 176617484 176617485 G A 16 INTERGENIC homozygous 57811973 3 176617620 176617621 A C 20 INTERGENIC homozygous 57811975 3 176617775 176617776 C T 29 INTERGENIC homozygous 57811977 3 176617776 176617777 A G 29 INTERGENIC homozygous 57811979 3 176617894 176618007 AGGGTCAAATTTTTTTTTTTTGTTGTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCCCT ----------------------------------------------------------------------------------------------------------------- 16 INTERGENIC homozygous 58634099 3 176618223 176618224 T - 11 INTERGENIC homozygous 57811985 3 176618335 176618336 G A 22 INTERGENIC homozygous 57811987 3 176618345 176618346 G A 24 INTERGENIC homozygous 57811989 3 176618399 176618400 G A 19 INTERGENIC homozygous 57811992 3 176618697 176618698 G GGTGTGT 4 INTERGENIC heterozygous 58634101 3 176618813 176618814 G GTGAGAACCTA 18 INTERGENIC homozygous 57811996 3 176618999 176619000 C T 16 INTERGENIC homozygous 57811998 3 176619251 176619252 A G 23 INTERGENIC homozygous 57812000 3 176619850 176619851 T A 10 INTERGENIC homozygous 57812002 3 176620407 176620423 TTGTTTGTTTGTTTGT ---------------- 11 INTERGENIC homozygous 57812004 3 176620637 176620638 C T 15 INTERGENIC homozygous 57812006 3 176621165 176621166 T C 23 INTERGENIC homozygous 58535209 3 176622631 176622632 C T 4 INTERGENIC homozygous 57812008 3 176622969 176622970 A - 10 INTERGENIC homozygous 57812010 3 176622976 176622977 T C 11 INTERGENIC homozygous 57812012 3 176623095 176623101 ACACAC ------ 1 INTERGENIC homozygous 57812014 3 176624602 176624603 C A 10 INTERGENIC homozygous 57812016 3 176624856 176624857 T G 6 INTERGENIC homozygous 57812018 3 176626156 176626157 G GAGAA 3 GENIC heterozygous 57812020 3 176626864 176626865 C CGGCGTT 5 GENIC homozygous 57812021 3 176628370 176628372 AA -- 3 GENIC heterozygous 58661011 3 176628371 176628372 A - 3 GENIC heterozygous 58634102 3 176628713 176628714 A G 19 GENIC homozygous 57812027 3 176629137 176629138 T TG 5 GENIC homozygous 57812029 3 176629331 176629332 T TTTGGAAAGGTCTCTCGTGCTCGCTTCGGCAGCACATATACTAAAA 25 GENIC homozygous 58634103 3 176630100 176630101 T C 11 GENIC homozygous 57812031 3 176630121 176630122 T C 14 GENIC homozygous 57812033 3 176630412 176630414 AA -- 10 GENIC homozygous 57812035 3 176631062 176631065 GAA --- 14 GENIC homozygous 57812039 3 176631108 176631109 A G 10 GENIC homozygous 57812041 3 176631737 176631738 T C 16 GENIC homozygous 57812043 3 176632061 176632062 G T 13 GENIC homozygous 57812045 3 176633224 176633225 G A 12 GENIC homozygous 57812047 3 176633235 176633236 A G 9 GENIC homozygous 57812049 3 176634385 176634386 A ATTT 13 INTERGENIC heterozygous 58634104 3 176633772 176633780 GAAATATT -------- 15 INTERGENIC homozygous 57812051 3 176633816 176633817 A AT 11 INTERGENIC homozygous 57812053 3 176634385 176634386 A ATT 13 INTERGENIC heterozygous 57812055 3 176634702 176634703 C T 13 INTERGENIC homozygous 57812057 3 176635605 176635606 G A 13 INTERGENIC homozygous 57812059 3 176635799 176635800 T - 15 INTERGENIC homozygous 57812061 3 176636119 176636120 T TA 10 INTERGENIC homozygous 57812063 3 176636260 176636261 T TC 15 INTERGENIC homozygous 57812065 3 176636267 176636268 T TC 14 INTERGENIC homozygous 57812067 3 176636276 176636277 C - 13 INTERGENIC homozygous 58634105 3 176636280 176636281 T TC 13 INTERGENIC homozygous 58634106 3 176636313 176636314 T TTG 9 INTERGENIC homozygous 58634107 3 176636351 176636352 T G 2 INTERGENIC homozygous 57812073 3 176636365 176636366 C CT 2 INTERGENIC heterozygous 57812075 3 176636369 176636370 C T 3 INTERGENIC homozygous 57812077 3 176637195 176637196 A T 16 INTERGENIC homozygous 57812081 3 176638067 176638068 A AGTGT 15 INTERGENIC possibly homozygous 57812083 3 176638067 176638068 A AGT 15 INTERGENIC heterozygous 58254018 3 176638353 176638354 A G 21 INTERGENIC homozygous 57812085 3 176639433 176639435 GT -- 7 INTERGENIC homozygous 58634108 3 176639436 176639486 TATGTGTGTGTATGTGTGTGAGTGTATGTGTGTGTATGTGTGTCTTTATG -------------------------------------------------- 11 INTERGENIC homozygous 58634109 3 176639502 176639513 TGTGTATATAT ----------- 5 INTERGENIC homozygous 58634110 3 176639625 176639727 TGTGTGTATATATGTGTGTATATATGTGTGTATGTGTATGTGTGTGAGTGTATGTGTGTGTATGTGTGTCTTTATGTGTATGTGTGTATGTGTGTGTATATA ------------------------------------------------------------------------------------------------------ 15 INTERGENIC homozygous 58634111 3 176639850 176639851 G A 25 INTERGENIC homozygous 57812113 3 176639874 176639875 A - 21 INTERGENIC homozygous 57812115 3 176639876 176639877 A C 22 INTERGENIC homozygous 57812117 3 176640358 176640359 A G 18 INTERGENIC homozygous 57812119 3 176640583 176640584 G GGA 13 INTERGENIC homozygous 57812121 3 176640616 176640624 AAGGAAGA -------- 19 INTERGENIC homozygous 58634112 3 176641021 176641022 A G 19 INTERGENIC homozygous 57812131 3 176641077 176641078 G GAAAA 8 INTERGENIC homozygous 57812133 3 176641556 176641557 G GAAGCGCA 1 INTERGENIC homozygous 57812135 3 176641605 176641606 C CAAAAAAAAAA 1 INTERGENIC homozygous 58634113 3 176641729 176641730 A T 14 INTERGENIC homozygous 57812145 3 176641767 176641768 C T 20 INTERGENIC homozygous 57812147 3 176642036 176642037 A - 15 INTERGENIC homozygous 57812149 3 176642085 176642086 A T 25 INTERGENIC homozygous 57812151 3 176643623 176643624 T C 12 INTERGENIC homozygous 57812153 3 176644048 176644049 G A 11 INTERGENIC homozygous 57812155 3 176644073 176644074 T C 3 INTERGENIC homozygous 57812157 3 176644898 176644899 A T 27 INTERGENIC homozygous 57812159 3 176644990 176644993 TCC --- 25 INTERGENIC homozygous 57812161