chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 164948679 164948680 T A 15 INTERGENIC heterozygous 57767481 3 164958863 164958864 A G 9 INTERGENIC heterozygous 58439594 3 164955723 164955724 T C 22 INTERGENIC homozygous 58565053