chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 114087496 114087497 T TC 21 INTERGENIC homozygous 57606575 3 114087673 114087674 T C 46 INTERGENIC homozygous 57606577 3 114090267 114090268 G A 22 INTERGENIC homozygous 57606579